RNA–Protein interactions for RNA: ENST00000558264.5

TPM1-210, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 2,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-210ENST00000558264 TLL2Q9Y6L7 1015 aa10.89□□□□□ -0.67
TPM1-210ENST00000558264 A0A0A0MRY4 1105 aa10.89□□□□□ -0.67
TPM1-210ENST00000558264 MGAT1P26572 445 aa10.89□□□□□ -0.67
TPM1-210ENST00000558264 TPI1P60174 286 aa10.89□□□□□ -0.67
TPM1-210ENST00000558264 XRCC4Q13426 336 aa10.89□□□□□ -0.67
TPM1-210ENST00000558264 PDK4Q16654 411 aa10.89□□□□□ -0.67
TPM1-210ENST00000558264 MROH9Q5TGP6 573 aa10.89□□□□□ -0.67
TPM1-210ENST00000558264 SDHAF4Q5VUM1 108 aa10.89□□□□□ -0.67
TPM1-210ENST00000558264 BHLHA9Q7RTU4 235 aa10.89□□□□□ -0.67
TPM1-210ENST00000558264 ZNF567Q8N184 647 aa10.89□□□□□ -0.67
TPM1-210ENST00000558264 KIF2BQ8N4N8 673 aa10.89□□□□□ -0.67
TPM1-210ENST00000558264 ZNF75CPQ92670 426 aaPredicted RBP10.89□□□□□ -0.67
TPM1-210ENST00000558264 RNF34Q969K3 372 aa10.89□□□□□ -0.67
TPM1-210ENST00000558264 SMARCD1Q96GM5 515 aa10.89□□□□□ -0.67
TPM1-210ENST00000558264 SPATA13Q96N96 652 aa10.89□□□□□ -0.67
TPM1-210ENST00000558264 TKTL2Q9H0I9 626 aa10.89□□□□□ -0.67
TPM1-210ENST00000558264 UPF3AQ9H1J1 476 aaKnown RBP10.89□□□□□ -0.67
TPM1-210ENST00000558264 CHST12Q9NRB3 414 aa10.89□□□□□ -0.67
TPM1-210ENST00000558264 CDH9Q9ULB4 789 aa10.89□□□□□ -0.67
TPM1-210ENST00000558264 ARL2BPQ9Y2Y0 163 aa10.89□□□□□ -0.67
TPM1-210ENST00000558264 IQANK1A0A1B0GTG1 560 aa10.88□□□□□ -0.67
TPM1-210ENST00000558264 SRGAP2BP0DMP2 458 aa10.88□□□□□ -0.67
TPM1-210ENST00000558264 ODC1P11926 461 aa10.88□□□□□ -0.67
TPM1-210ENST00000558264 WASHC5Q12768 1159 aa10.88□□□□□ -0.67
TPM1-210ENST00000558264 ITGA7Q13683 1181 aa10.88□□□□□ -0.67
TPM1-210ENST00000558264 DPYSQ14117 519 aa10.88□□□□□ -0.67
TPM1-210ENST00000558264 LACTB2Q53H82 288 aaPredicted RBP10.88□□□□□ -0.67
TPM1-210ENST00000558264 CD300LGQ6UXG3 332 aa10.88□□□□□ -0.67
TPM1-210ENST00000558264 PID1Q7Z2X4 250 aa10.88□□□□□ -0.67
TPM1-210ENST00000558264 LRRC6Q86X45 466 aa10.88□□□□□ -0.67
TPM1-210ENST00000558264 VSIG1Q86XK7 387 aa10.88□□□□□ -0.67
TPM1-210ENST00000558264 TMEM86AQ8N2M4 240 aa10.88□□□□□ -0.67
TPM1-210ENST00000558264 ANKLE1Q8NAG6 615 aa10.88□□□□□ -0.67
TPM1-210ENST00000558264 PGBD4Q96DM1 585 aa10.88□□□□□ -0.67
TPM1-210ENST00000558264 TSPAN18Q96SJ8 248 aa10.88□□□□□ -0.67
TPM1-210ENST00000558264 APOL2Q9BQE5 337 aa10.88□□□□□ -0.67
TPM1-210ENST00000558264 MECRQ9BV79 373 aa10.88□□□□□ -0.67
TPM1-210ENST00000558264 SIK2Q9H0K1 926 aa10.88□□□□□ -0.67
TPM1-210ENST00000558264 TRPV6Q9H1D0 765 aa10.88□□□□□ -0.67
TPM1-210ENST00000558264 ACTR5Q9H9F9 607 aaPredicted RBP10.88□□□□□ -0.67
TPM1-210ENST00000558264 NPHS2Q9NP85 383 aa10.88□□□□□ -0.67
TPM1-210ENST00000558264 E2F8A0AVK6 867 aa10.88□□□□□ -0.67
TPM1-210ENST00000558264 MSI1O43347 362 aaKnown RBP10.88□□□□□ -0.67
TPM1-210ENST00000558264 APOEP02649 317 aa10.88□□□□□ -0.67
TPM1-210ENST00000558264 NEFHP12036 1026 aa10.88□□□□□ -0.67
TPM1-210ENST00000558264 PCSK1P29120 753 aa10.88□□□□□ -0.67
TPM1-210ENST00000558264 GMPRP36959 345 aa10.88□□□□□ -0.67
TPM1-210ENST00000558264 IRX4P78413 519 aa10.88□□□□□ -0.67
TPM1-210ENST00000558264 SEMA5AQ13591 1074 aa10.88□□□□□ -0.67
TPM1-210ENST00000558264 OTOAQ7RTW8 1153 aa10.88□□□□□ -0.67
TPM1-210ENST00000558264 TBC1D1Q86TI0 1168 aaPredicted RBP10.88□□□□□ -0.67
TPM1-210ENST00000558264 TAC4Q86UU9 113 aa10.88□□□□□ -0.67
TPM1-210ENST00000558264 SLC26A11Q86WA9 606 aa10.88□□□□□ -0.67
TPM1-210ENST00000558264 ZNF280BQ86YH2 543 aa10.88□□□□□ -0.67
TPM1-210ENST00000558264 EBNA1BP2Q99848 306 aaKnown RBP10.88□□□□□ -0.67
TPM1-210ENST00000558264 COLEC11Q9BWP8 271 aa10.88□□□□□ -0.67
TPM1-210ENST00000558264 UBP1Q9NZI7 540 aa10.88□□□□□ -0.67
TPM1-210ENST00000558264 KLHL14Q9P2G3 628 aa10.88□□□□□ -0.67
TPM1-210ENST00000558264 KLHL8Q9P2G9 620 aaPredicted RBP10.88□□□□□ -0.67
TPM1-210ENST00000558264 PRKAG3Q9UGI9 489 aa10.88□□□□□ -0.67
TPM1-210ENST00000558264 DCTN4Q9UJW0 460 aa10.88□□□□□ -0.67
TPM1-210ENST00000558264 A0A0U1RQF3 1178 aa10.87□□□□□ -0.67
TPM1-210ENST00000558264 CCDC195A0A1B0GUA6 201 aa10.87□□□□□ -0.67
TPM1-210ENST00000558264 CCDC78A2IDD5 438 aa10.87□□□□□ -0.67
TPM1-210ENST00000558264 ZNF487B1APH4 448 aa10.87□□□□□ -0.67
TPM1-210ENST00000558264 DCLK1O15075 740 aa10.87□□□□□ -0.67
TPM1-210ENST00000558264 ZWINTO95229 277 aa10.87□□□□□ -0.67
TPM1-210ENST00000558264 HNRNPH1P31943 449 aaKnown RBP10.87□□□□□ -0.67
TPM1-210ENST00000558264 NUMBP49757 651 aa10.87□□□□□ -0.67
TPM1-210ENST00000558264 PRKD1Q15139 912 aaPredicted RBP10.87□□□□□ -0.67
TPM1-210ENST00000558264 RAB41Q5JT25 222 aa10.87□□□□□ -0.67
TPM1-210ENST00000558264 OVOS1Q6IE37 1185 aa10.87□□□□□ -0.67
TPM1-210ENST00000558264 BNIPLQ7Z465 357 aa10.87□□□□□ -0.67
TPM1-210ENST00000558264 CNPY4Q8N129 248 aa10.87□□□□□ -0.67
TPM1-210ENST00000558264 WDCPQ9H6R7 721 aa10.87□□□□□ -0.67
TPM1-210ENST00000558264 ECT2Q9H8V3 914 aa10.87□□□□□ -0.67
TPM1-210ENST00000558264 PPCSQ9HAB8 311 aa10.87□□□□□ -0.67
TPM1-210ENST00000558264 CNGB3Q9NQW8 809 aa10.87□□□□□ -0.67
TPM1-210ENST00000558264 PCMTD2Q9NV79 361 aa10.87□□□□□ -0.67
TPM1-210ENST00000558264 SLC12A4Q9UP95 1085 aa10.87□□□□□ -0.67
TPM1-210ENST00000558264 PRG3Q9Y2Y8 225 aaPredicted RBP10.87□□□□□ -0.67
TPM1-210ENST00000558264 TTC3P53804 2025 aa10.87□□□□□ -0.67
TPM1-210ENST00000558264 C2orf71A6NGG8 1288 aa10.87□□□□□ -0.67
TPM1-210ENST00000558264 EDF1O60869 148 aaKnown RBP10.87□□□□□ -0.67
TPM1-210ENST00000558264 BGNP21810 368 aa10.87□□□□□ -0.67
TPM1-210ENST00000558264 EPHB2P29323 1055 aa10.87□□□□□ -0.67
TPM1-210ENST00000558264 MAGEA3P43357 314 aa10.87□□□□□ -0.67
TPM1-210ENST00000558264 MAGEA6P43360 314 aa10.87□□□□□ -0.67
TPM1-210ENST00000558264 TM4SF4P48230 202 aa10.87□□□□□ -0.67
TPM1-210ENST00000558264 KCNJ2P63252 427 aa10.87□□□□□ -0.67
TPM1-210ENST00000558264 RASA2Q15283 850 aa10.87□□□□□ -0.67
TPM1-210ENST00000558264 INTS6LQ5JSJ4 861 aaKnown RBP10.87□□□□□ -0.67
TPM1-210ENST00000558264 RWDD4Q6NW29 188 aaKnown RBP10.87□□□□□ -0.67
TPM1-210ENST00000558264 MRPL10Q7Z7H8 261 aaKnown RBP10.87□□□□□ -0.67
TPM1-210ENST00000558264 METTL23Q86XA0 190 aa10.87□□□□□ -0.67
TPM1-210ENST00000558264 USP33Q8TEY7 942 aa10.87□□□□□ -0.67
TPM1-210ENST00000558264 RSPH1Q8WYR4 309 aa10.87□□□□□ -0.67
TPM1-210ENST00000558264 STAMBPL1Q96FJ0 436 aa10.87□□□□□ -0.67
TPM1-210ENST00000558264 SYBUQ9NX95 663 aa10.87□□□□□ -0.67
TPM1-210ENST00000558264 FETUBQ9UGM5 382 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms