RNA–Protein interactions for RNA: ENST00000557529.1

SHMT2-233, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-233ENST00000557529 STK10O94804 968 aaKnown RBP12.89□□□□□ -0.35
SHMT2-233ENST00000557529 NUDT17P0C025 328 aa12.89□□□□□ -0.35
SHMT2-233ENST00000557529 ZDHHC11BP0C7U3 371 aa12.89□□□□□ -0.35
SHMT2-233ENST00000557529 CSH1P0DML2 217 aa12.89□□□□□ -0.35
SHMT2-233ENST00000557529 CSH2P0DML3 217 aa12.89□□□□□ -0.35
SHMT2-233ENST00000557529 ERCC2P18074 760 aa12.89□□□□□ -0.35
SHMT2-233ENST00000557529 ATF6P18850 670 aa12.89□□□□□ -0.35
SHMT2-233ENST00000557529 RBL1P28749 1068 aa12.89□□□□□ -0.35
SHMT2-233ENST00000557529 SERPINB6P35237 376 aa12.89□□□□□ -0.35
SHMT2-233ENST00000557529 KPNA1P52294 538 aaPredicted RBP12.89□□□□□ -0.35
SHMT2-233ENST00000557529 TBX4P57082 545 aa12.89□□□□□ -0.35
SHMT2-233ENST00000557529 NRG1Q02297 640 aaPredicted RBP12.89□□□□□ -0.35
SHMT2-233ENST00000557529 SLC10A2Q12908 348 aaPredicted RBP12.89□□□□□ -0.35
SHMT2-233ENST00000557529 MTA1Q13330 715 aa12.89□□□□□ -0.35
SHMT2-233ENST00000557529 TRIP4Q15650 581 aaPredicted RBP12.89□□□□□ -0.35
SHMT2-233ENST00000557529 ACBD5Q5T8D3 534 aaPredicted RBP12.89□□□□□ -0.35
SHMT2-233ENST00000557529 FAM72AQ5TYM5 149 aa12.89□□□□□ -0.35
SHMT2-233ENST00000557529 DENND2CQ68D51 928 aa12.89□□□□□ -0.35
SHMT2-233ENST00000557529 FAM72DQ6L9T8 149 aa12.89□□□□□ -0.35
SHMT2-233ENST00000557529 FAM72BQ86X60 149 aa12.89□□□□□ -0.35
SHMT2-233ENST00000557529 RELL1Q8IUW5 271 aa12.89□□□□□ -0.35
SHMT2-233ENST00000557529 ZNF276Q8N554 614 aa12.89□□□□□ -0.35
SHMT2-233ENST00000557529 STKLD1Q8NE28 680 aa12.89□□□□□ -0.35
SHMT2-233ENST00000557529 GIPC2Q8TF65 315 aa12.89□□□□□ -0.35
SHMT2-233ENST00000557529 TFB1MQ8WVM0 346 aaKnown RBP12.89□□□□□ -0.35
SHMT2-233ENST00000557529 PHACTR1Q9C0D0 580 aa12.89□□□□□ -0.35
SHMT2-233ENST00000557529 BRD8Q9H0E9 1235 aa12.89□□□□□ -0.35
SHMT2-233ENST00000557529 ETNK2Q9NVF9 386 aa12.89□□□□□ -0.35
SHMT2-233ENST00000557529 FNIP2Q9P278 1114 aa12.89□□□□□ -0.35
SHMT2-233ENST00000557529 SLC12A6Q9UHW9 1150 aa12.89□□□□□ -0.35
SHMT2-233ENST00000557529 FARP1Q9Y4F1 1045 aaPredicted RBP12.89□□□□□ -0.35
SHMT2-233ENST00000557529 CEP350Q5VT06 3117 aa12.89□□□□□ -0.35
SHMT2-233ENST00000557529 MYO16Q9Y6X6 1858 aa12.88□□□□□ -0.35
SHMT2-233ENST00000557529 KCNU1A8MYU2 1149 aa12.88□□□□□ -0.35
SHMT2-233ENST00000557529 FGF10O15520 208 aaPredicted RBP12.88□□□□□ -0.35
SHMT2-233ENST00000557529 MSI1O43347 362 aaKnown RBP12.88□□□□□ -0.35
SHMT2-233ENST00000557529 MFSD11O43934 449 aa12.88□□□□□ -0.35
SHMT2-233ENST00000557529 PAGE1O75459 146 aa12.88□□□□□ -0.35
SHMT2-233ENST00000557529 GCATO75600 419 aa12.88□□□□□ -0.35
SHMT2-233ENST00000557529 LRIG2O94898 1065 aa12.88□□□□□ -0.35
SHMT2-233ENST00000557529 SYF2O95926 243 aaKnown RBP12.88□□□□□ -0.35
SHMT2-233ENST00000557529 APOEP02649 317 aa12.88□□□□□ -0.35
SHMT2-233ENST00000557529 MX2P20592 715 aa12.88□□□□□ -0.35
SHMT2-233ENST00000557529 EPHB2P29323 1055 aa12.88□□□□□ -0.35
SHMT2-233ENST00000557529 ELF1P32519 619 aa12.88□□□□□ -0.35
SHMT2-233ENST00000557529 ALDH1A3P47895 512 aa12.88□□□□□ -0.35
SHMT2-233ENST00000557529 EFEMP1Q12805 493 aa12.88□□□□□ -0.35
SHMT2-233ENST00000557529 VEPH1Q14D04 833 aa12.88□□□□□ -0.35
SHMT2-233ENST00000557529 C10orf120Q5SQS8 335 aa12.88□□□□□ -0.35
SHMT2-233ENST00000557529 TMEM240Q5SV17 173 aa12.88□□□□□ -0.35
SHMT2-233ENST00000557529 HEATR6Q6AI08 1181 aaKnown RBP12.88□□□□□ -0.35
SHMT2-233ENST00000557529 CROCCP2Q86T23 111 aa12.88□□□□□ -0.35
SHMT2-233ENST00000557529 PHOSPHO2Q8TCD6 241 aa12.88□□□□□ -0.35
SHMT2-233ENST00000557529 PRCCQ92733 491 aaPredicted RBP12.88□□□□□ -0.35
SHMT2-233ENST00000557529 SLC39A13Q96H72 371 aa12.88□□□□□ -0.35
SHMT2-233ENST00000557529 C1orf74Q96LT6 269 aa12.88□□□□□ -0.35
SHMT2-233ENST00000557529 CATSPERBQ9H7T0 1116 aa12.88□□□□□ -0.35
SHMT2-233ENST00000557529 MARCH2Q9P0N8 246 aa12.88□□□□□ -0.35
SHMT2-233ENST00000557529 C5orf60A6NFR6 353 aa12.87□□□□□ -0.35
SHMT2-233ENST00000557529 H0YGN5 161 aa12.87□□□□□ -0.35
SHMT2-233ENST00000557529 EIF3HO15372 352 aaKnown RBP eCLIP12.87□□□□□ -0.35
SHMT2-233ENST00000557529 FGF18O76093 207 aa12.87□□□□□ -0.35
SHMT2-233ENST00000557529 SEC24AO95486 1093 aa12.87□□□□□ -0.35
SHMT2-233ENST00000557529 HOXC13P31276 330 aa12.87□□□□□ -0.35
SHMT2-233ENST00000557529 CHKAP35790 457 aa12.87□□□□□ -0.35
SHMT2-233ENST00000557529 BASP1P80723 227 aaKnown RBP12.87□□□□□ -0.35
SHMT2-233ENST00000557529 RING1Q06587 406 aa12.87□□□□□ -0.35
SHMT2-233ENST00000557529 IFFO1Q0D2I5 559 aa12.87□□□□□ -0.35
SHMT2-233ENST00000557529 PRKD1Q15139 912 aaPredicted RBP12.87□□□□□ -0.35
SHMT2-233ENST00000557529 TAF12Q16514 161 aa12.87□□□□□ -0.35
SHMT2-233ENST00000557529 CEP85LQ5SZL2 805 aa12.87□□□□□ -0.35
SHMT2-233ENST00000557529 RASIP1Q5U651 963 aa12.87□□□□□ -0.35
SHMT2-233ENST00000557529 SNX30Q5VWJ9 437 aa12.87□□□□□ -0.35
SHMT2-233ENST00000557529 PPP1R21Q6ZMI0 780 aa12.87□□□□□ -0.35
SHMT2-233ENST00000557529 TCEAL8Q8IYN2 117 aa12.87□□□□□ -0.35
SHMT2-233ENST00000557529 C7orf61Q8IZ16 206 aa12.87□□□□□ -0.35
SHMT2-233ENST00000557529 ATP6V0D2Q8N8Y2 350 aa12.87□□□□□ -0.35
SHMT2-233ENST00000557529 NAT8LQ8N9F0 302 aa12.87□□□□□ -0.35
SHMT2-233ENST00000557529 HTR3CQ8WXA8 447 aa12.87□□□□□ -0.35
SHMT2-233ENST00000557529 HERVK_113Q902F9 699 aa12.87□□□□□ -0.35
SHMT2-233ENST00000557529 CPT1BQ92523 772 aa12.87□□□□□ -0.35
SHMT2-233ENST00000557529 CLP1Q92989 425 aaKnown RBP12.87□□□□□ -0.35
SHMT2-233ENST00000557529 TBC1D31Q96DN5 1066 aa12.87□□□□□ -0.35
SHMT2-233ENST00000557529 FCRL2Q96LA5 508 aaPredicted RBP12.87□□□□□ -0.35
SHMT2-233ENST00000557529 MYRFLQ96LU7 910 aa12.87□□□□□ -0.35
SHMT2-233ENST00000557529 RBM15Q96T37 977 aaKnown RBP eCLIP12.87□□□□□ -0.35
SHMT2-233ENST00000557529 RAD9AQ99638 391 aa12.87□□□□□ -0.35
SHMT2-233ENST00000557529 FRMD8Q9BZ67 464 aaPredicted RBP12.87□□□□□ -0.35
SHMT2-233ENST00000557529 KLC2Q9H0B6 622 aa12.87□□□□□ -0.35
SHMT2-233ENST00000557529 SIK2Q9H0K1 926 aa12.87□□□□□ -0.35
SHMT2-233ENST00000557529 MTIF3Q9H2K0 278 aaKnown RBP12.87□□□□□ -0.35
SHMT2-233ENST00000557529 SEMA4AQ9H3S1 761 aa12.87□□□□□ -0.35
SHMT2-233ENST00000557529 CYP4F11Q9HBI6 524 aa12.87□□□□□ -0.35
SHMT2-233ENST00000557529 RXFP1Q9HBX9 757 aa12.87□□□□□ -0.35
SHMT2-233ENST00000557529 NUDT5Q9UKK9 219 aa12.87□□□□□ -0.35
SHMT2-233ENST00000557529 MAGED2Q9UNF1 606 aaPredicted RBP12.87□□□□□ -0.35
SHMT2-233ENST00000557529 MFHAS1Q9Y4C4 1052 aa12.87□□□□□ -0.35
SHMT2-233ENST00000557529 YIPF1Q9Y548 306 aa12.87□□□□□ -0.35
SHMT2-233ENST00000557529 NFS1Q9Y697 457 aa12.87□□□□□ -0.35
SHMT2-233ENST00000557529 SLC4A7Q9Y6M7 1214 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms