RNA–Protein interactions for RNA: ENST00000557519.1

RPS29-208, Transcript of ribosomal protein S29, human

TSL 3

Gene RPS29, Length 333 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPS29-208	ENST00000557519	KCNU1	A8MYU2	1149 aa		10.1	□□□□□ -0.79
RPS29-208	ENST00000557519		H0Y626	953 aa		10.1	□□□□□ -0.79
RPS29-208	ENST00000557519	TSPAN3	O60637	253 aa		10.1	□□□□□ -0.79
RPS29-208	ENST00000557519	TBL1X	O60907	577 aa		10.1	□□□□□ -0.79
RPS29-208	ENST00000557519	ZNF217	O75362	1048 aa		10.1	□□□□□ -0.79
RPS29-208	ENST00000557519	GABBR2	O75899	941 aa		10.1	□□□□□ -0.79
RPS29-208	ENST00000557519	ERBB2	P04626	1255 aa		10.1	□□□□□ -0.79
RPS29-208	ENST00000557519	RET	P07949	1114 aa		10.1	□□□□□ -0.79
RPS29-208	ENST00000557519	MME	P08473	750 aa		10.1	□□□□□ -0.79
RPS29-208	ENST00000557519	ATP1A3	P13637	1013 aa		10.1	□□□□□ -0.79
RPS29-208	ENST00000557519	HNRNPL	P14866	589 aa	Known RBP eCLIP	10.1	□□□□□ -0.79
RPS29-208	ENST00000557519	SDHB	P21912	280 aa		10.1	□□□□□ -0.79
RPS29-208	ENST00000557519	HOXD9	P28356	352 aa	Predicted RBP	10.1	□□□□□ -0.79
RPS29-208	ENST00000557519	DPP6	P42658	865 aa		10.1	□□□□□ -0.79
RPS29-208	ENST00000557519	KLK7	P49862	253 aa		10.1	□□□□□ -0.79
RPS29-208	ENST00000557519	SULT1E1	P49888	294 aa		10.1	□□□□□ -0.79
RPS29-208	ENST00000557519	ST8SIA6	P61647	398 aa		10.1	□□□□□ -0.79
RPS29-208	ENST00000557519	NOMO3	P69849	1222 aa		10.1	□□□□□ -0.79
RPS29-208	ENST00000557519	NME3	Q13232	169 aa		10.1	□□□□□ -0.79
RPS29-208	ENST00000557519	BRMS1L	Q5PSV4	323 aa		10.1	□□□□□ -0.79
RPS29-208	ENST00000557519	PIK3R6	Q5UE93	754 aa		10.1	□□□□□ -0.79
RPS29-208	ENST00000557519	NAA35	Q5VZE5	725 aa		10.1	□□□□□ -0.79
RPS29-208	ENST00000557519	DPY19L2P1	Q6NXN4	242 aa		10.1	□□□□□ -0.79
RPS29-208	ENST00000557519	ARC	Q7LC44	396 aa		10.1	□□□□□ -0.79
RPS29-208	ENST00000557519	WDTC1	Q8N5D0	677 aa		10.1	□□□□□ -0.79
RPS29-208	ENST00000557519	SUMF1	Q8NBK3	374 aa		10.1	□□□□□ -0.79
RPS29-208	ENST00000557519	EZH1	Q92800	747 aa	Predicted RBP	10.1	□□□□□ -0.79
RPS29-208	ENST00000557519	SLC39A13	Q96H72	371 aa		10.1	□□□□□ -0.79
RPS29-208	ENST00000557519	NUP58	Q9BVL2	599 aa		10.1	□□□□□ -0.79
RPS29-208	ENST00000557519	NUCKS1	Q9H1E3	243 aa	Known RBP	10.1	□□□□□ -0.79
RPS29-208	ENST00000557519	WDCP	Q9H6R7	721 aa		10.1	□□□□□ -0.79
RPS29-208	ENST00000557519	FBRS	Q9HAH7	460 aa		10.1	□□□□□ -0.79
RPS29-208	ENST00000557519	RTN4	Q9NQC3	1192 aa	Known RBP	10.1	□□□□□ -0.79
RPS29-208	ENST00000557519	COX16	Q9P0S2	106 aa		10.1	□□□□□ -0.79
RPS29-208	ENST00000557519	GGA2	Q9UJY4	613 aa		10.1	□□□□□ -0.79
RPS29-208	ENST00000557519	NOCT	Q9UK39	431 aa	Known RBP	10.1	□□□□□ -0.79
RPS29-208	ENST00000557519		M0QYT0	321 aa		10.09	□□□□□ -0.79
RPS29-208	ENST00000557519	SGK1	O00141	431 aa		10.09	□□□□□ -0.79
RPS29-208	ENST00000557519	MAP3K13	O43283	966 aa		10.09	□□□□□ -0.79
RPS29-208	ENST00000557519	GRAP2	O75791	330 aa		10.09	□□□□□ -0.79
RPS29-208	ENST00000557519	IGLV3-25	P01717	112 aa		10.09	□□□□□ -0.79
RPS29-208	ENST00000557519	ASL	P04424	464 aa		10.09	□□□□□ -0.79
RPS29-208	ENST00000557519	FYN	P06241	537 aa		10.09	□□□□□ -0.79
RPS29-208	ENST00000557519	CISD3	P0C7P0	127 aa		10.09	□□□□□ -0.79
RPS29-208	ENST00000557519	PABPC1	P11940	636 aa	Known RBP	10.09	□□□□□ -0.79
RPS29-208	ENST00000557519	POLR2E	P19388	210 aa	Known RBP	10.09	□□□□□ -0.79
RPS29-208	ENST00000557519	RNASE9	P60153	205 aa	Known RBP	10.09	□□□□□ -0.79
RPS29-208	ENST00000557519	DEUP1	Q05D60	604 aa		10.09	□□□□□ -0.79
RPS29-208	ENST00000557519	SFSWAP	Q12872	951 aa	Known RBP	10.09	□□□□□ -0.79
RPS29-208	ENST00000557519	SLC12A1	Q13621	1099 aa		10.09	□□□□□ -0.79
RPS29-208	ENST00000557519	ZSCAN23	Q3MJ62	389 aa		10.09	□□□□□ -0.79
RPS29-208	ENST00000557519	ARL13B	Q3SXY8	428 aa		10.09	□□□□□ -0.79
RPS29-208	ENST00000557519	SLC25A52	Q3SY17	297 aa		10.09	□□□□□ -0.79
RPS29-208	ENST00000557519	ZC3H12A	Q5D1E8	599 aa	Known RBP	10.09	□□□□□ -0.79
RPS29-208	ENST00000557519	MS4A13	Q5J8X5	152 aa		10.09	□□□□□ -0.79
RPS29-208	ENST00000557519	SYPL2	Q5VXT5	272 aa		10.09	□□□□□ -0.79
RPS29-208	ENST00000557519	RNF219	Q5W0B1	726 aa	Predicted RBP	10.09	□□□□□ -0.79
RPS29-208	ENST00000557519	EGFLAM	Q63HQ2	1017 aa		10.09	□□□□□ -0.79
RPS29-208	ENST00000557519	LRSAM1	Q6UWE0	723 aa		10.09	□□□□□ -0.79
RPS29-208	ENST00000557519	SERPINA13P	Q6UXR4	307 aa		10.09	□□□□□ -0.79
RPS29-208	ENST00000557519	LRRC31	Q6UY01	552 aa		10.09	□□□□□ -0.79
RPS29-208	ENST00000557519	SLC36A4	Q6YBV0	504 aa		10.09	□□□□□ -0.79
RPS29-208	ENST00000557519	VPS36	Q86VN1	386 aa		10.09	□□□□□ -0.79
RPS29-208	ENST00000557519	RASSF3	Q86WH2	238 aa		10.09	□□□□□ -0.79
RPS29-208	ENST00000557519	XYLT1	Q86Y38	959 aa		10.09	□□□□□ -0.79
RPS29-208	ENST00000557519	DDX51	Q8N8A6	666 aa	Known RBP eCLIP	10.09	□□□□□ -0.79
RPS29-208	ENST00000557519	HMGB4	Q8WW32	186 aa		10.09	□□□□□ -0.79
RPS29-208	ENST00000557519	CPA5	Q8WXQ8	436 aa		10.09	□□□□□ -0.79
RPS29-208	ENST00000557519	DDX1	Q92499	740 aa	Known RBP	10.09	□□□□□ -0.79
RPS29-208	ENST00000557519	PIWIL1	Q96J94	861 aa	Known RBP	10.09	□□□□□ -0.79
RPS29-208	ENST00000557519	GABRG3	Q99928	467 aa		10.09	□□□□□ -0.79
RPS29-208	ENST00000557519	FUCA2	Q9BTY2	467 aa		10.09	□□□□□ -0.79
RPS29-208	ENST00000557519	EDEM3	Q9BZQ6	932 aa		10.09	□□□□□ -0.79
RPS29-208	ENST00000557519	ABCB8	Q9NUT2	735 aa		10.09	□□□□□ -0.79
RPS29-208	ENST00000557519	ELOVL2	Q9NXB9	296 aa		10.09	□□□□□ -0.79
RPS29-208	ENST00000557519	PCDHGA5	Q9Y5G8	931 aa		10.09	□□□□□ -0.79
RPS29-208	ENST00000557519	DMD	P11532	3685 aa		10.09	□□□□□ -0.79
RPS29-208	ENST00000557519		A0A1B0GTH6	734 aa		10.08	□□□□□ -0.8
RPS29-208	ENST00000557519		A0A1B0GVM2	712 aa		10.08	□□□□□ -0.8
RPS29-208	ENST00000557519	TCAF2	A6NFQ2	919 aa		10.08	□□□□□ -0.8
RPS29-208	ENST00000557519	PRRT4	C9JH25	899 aa		10.08	□□□□□ -0.8
RPS29-208	ENST00000557519	GOLGA8S	H3BPF8	625 aa		10.08	□□□□□ -0.8
RPS29-208	ENST00000557519	CBFA2T2	O43439	604 aa		10.08	□□□□□ -0.8
RPS29-208	ENST00000557519	LUC7L3	O95232	432 aa	Known RBP	10.08	□□□□□ -0.8
RPS29-208	ENST00000557519	CYP1A1	P04798	512 aa	Predicted RBP	10.08	□□□□□ -0.8
RPS29-208	ENST00000557519	TPM1	P09493	284 aa		10.08	□□□□□ -0.8
RPS29-208	ENST00000557519	ACADM	P11310	421 aa		10.08	□□□□□ -0.8
RPS29-208	ENST00000557519	TACR2	P21452	398 aa		10.08	□□□□□ -0.8
RPS29-208	ENST00000557519	MMP8	P22894	467 aa		10.08	□□□□□ -0.8
RPS29-208	ENST00000557519	SDC4	P31431	198 aa		10.08	□□□□□ -0.8
RPS29-208	ENST00000557519	RDX	P35241	583 aa	Known RBP	10.08	□□□□□ -0.8
RPS29-208	ENST00000557519	NNMT	P40261	264 aa		10.08	□□□□□ -0.8
RPS29-208	ENST00000557519	PXN	P49023	591 aa	Predicted RBP	10.08	□□□□□ -0.8
RPS29-208	ENST00000557519	UBASH3A	P57075	661 aa		10.08	□□□□□ -0.8
RPS29-208	ENST00000557519	FMO1	Q01740	532 aa		10.08	□□□□□ -0.8
RPS29-208	ENST00000557519	CENPC	Q03188	943 aa		10.08	□□□□□ -0.8
RPS29-208	ENST00000557519	LMNB2	Q03252	620 aa		10.08	□□□□□ -0.8
RPS29-208	ENST00000557519	SULT2A1	Q06520	285 aa		10.08	□□□□□ -0.8
RPS29-208	ENST00000557519	C1QBP	Q07021	282 aa	Known RBP	10.08	□□□□□ -0.8
RPS29-208	ENST00000557519	DMWD	Q09019	674 aa		10.08	□□□□□ -0.8

Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms