RNA–Protein interactions for RNA: ENST00000557517.1

PSMC6-215, Transcript of proteasome 26S subunit, ATPase 6, humanhuman

TSL 3

Gene PSMC6, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC6-215ENST00000557517 CALCAP01258 141 aa11.03□□□□□ -0.64
PSMC6-215ENST00000557517 LTFP02788 710 aa11.03□□□□□ -0.64
PSMC6-215ENST00000557517 NDUFV2P19404 249 aa11.03□□□□□ -0.64
PSMC6-215ENST00000557517 BRD2P25440 801 aaKnown RBP11.03□□□□□ -0.64
PSMC6-215ENST00000557517 HOXD12P35452 270 aa11.03□□□□□ -0.64
PSMC6-215ENST00000557517 DPP6P42658 865 aa11.03□□□□□ -0.64
PSMC6-215ENST00000557517 DHPSP49366 369 aaPredicted RBP11.03□□□□□ -0.64
PSMC6-215ENST00000557517 RGS7P49802 495 aa11.03□□□□□ -0.64
PSMC6-215ENST00000557517 ACAP1Q15027 740 aa11.03□□□□□ -0.64
PSMC6-215ENST00000557517 SLC23A3Q6PIS1 610 aa11.03□□□□□ -0.64
PSMC6-215ENST00000557517 SLC36A4Q6YBV0 504 aa11.03□□□□□ -0.64
PSMC6-215ENST00000557517 UNC45BQ8IWX7 931 aa11.03□□□□□ -0.64
PSMC6-215ENST00000557517 ZNF419Q96HQ0 510 aaPredicted RBP11.03□□□□□ -0.64
PSMC6-215ENST00000557517 ITM2CQ9NQX7 267 aa11.03□□□□□ -0.64
PSMC6-215ENST00000557517 CACNA2D2Q9NY47 1150 aa11.03□□□□□ -0.64
PSMC6-215ENST00000557517 SETXQ7Z333 2677 aaKnown RBP11.02□□□□□ -0.64
PSMC6-215ENST00000557517 GTPBP10A4D1E9 387 aaKnown RBP11.02□□□□□ -0.65
PSMC6-215ENST00000557517 PATE3B3GLJ2 98 aa11.02□□□□□ -0.65
PSMC6-215ENST00000557517 M0QYV0 167 aa11.02□□□□□ -0.65
PSMC6-215ENST00000557517 IRAK2O43187 625 aa11.02□□□□□ -0.65
PSMC6-215ENST00000557517 AP5Z1O43299 807 aa11.02□□□□□ -0.65
PSMC6-215ENST00000557517 SLC9A1P19634 815 aa11.02□□□□□ -0.65
PSMC6-215ENST00000557517 HOXD9P28356 352 aaPredicted RBP11.02□□□□□ -0.65
PSMC6-215ENST00000557517 HLA-FP30511 346 aa11.02□□□□□ -0.65
PSMC6-215ENST00000557517 IL12RB1P42701 662 aa11.02□□□□□ -0.65
PSMC6-215ENST00000557517 ACADSBP45954 432 aa11.02□□□□□ -0.65
PSMC6-215ENST00000557517 EIF4EBP2Q13542 120 aaPredicted RBP11.02□□□□□ -0.65
PSMC6-215ENST00000557517 FUT11Q495W5 492 aa11.02□□□□□ -0.65
PSMC6-215ENST00000557517 PIK3R6Q5UE93 754 aa11.02□□□□□ -0.65
PSMC6-215ENST00000557517 LYSMD4Q5XG99 296 aa11.02□□□□□ -0.65
PSMC6-215ENST00000557517 TRIM65Q6PJ69 517 aa11.02□□□□□ -0.65
PSMC6-215ENST00000557517 CLEC17AQ6ZS10 378 aa11.02□□□□□ -0.65
PSMC6-215ENST00000557517 CYP2U1Q7Z449 544 aa11.02□□□□□ -0.65
PSMC6-215ENST00000557517 ANKS1BQ7Z6G8 1248 aa11.02□□□□□ -0.65
PSMC6-215ENST00000557517 ADIPOR2Q86V24 386 aa11.02□□□□□ -0.65
PSMC6-215ENST00000557517 WDTC1Q8N5D0 677 aa11.02□□□□□ -0.65
PSMC6-215ENST00000557517 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.02□□□□□ -0.65
PSMC6-215ENST00000557517 CLEC4CQ8WTT0 213 aa11.02□□□□□ -0.65
PSMC6-215ENST00000557517 UCMAQ8WVF2 138 aa11.02□□□□□ -0.65
PSMC6-215ENST00000557517 PIGKQ92643 395 aa11.02□□□□□ -0.65
PSMC6-215ENST00000557517 SLC39A13Q96H72 371 aa11.02□□□□□ -0.65
PSMC6-215ENST00000557517 MKRN2Q9H000 416 aaKnown RBP11.02□□□□□ -0.65
PSMC6-215ENST00000557517 MIS12Q9H081 205 aa11.02□□□□□ -0.65
PSMC6-215ENST00000557517 TMEM245Q9H330 911 aa11.02□□□□□ -0.65
PSMC6-215ENST00000557517 RAD54BQ9Y620 910 aa11.02□□□□□ -0.65
PSMC6-215ENST00000557517 ASPMQ8IZT6 3477 aa11.02□□□□□ -0.65
PSMC6-215ENST00000557517 FLNBO75369 2602 aaKnown RBP11.02□□□□□ -0.65
PSMC6-215ENST00000557517 DSPP15924 2871 aaKnown RBP11.02□□□□□ -0.65
PSMC6-215ENST00000557517 C4orf47A7E2U8 309 aa11.01□□□□□ -0.65
PSMC6-215ENST00000557517 BECN2A8MW95 431 aa11.01□□□□□ -0.65
PSMC6-215ENST00000557517 PIK3R2O00459 728 aa11.01□□□□□ -0.65
PSMC6-215ENST00000557517 PAPSS1O43252 624 aaPredicted RBP11.01□□□□□ -0.65
PSMC6-215ENST00000557517 SART1O43290 800 aaKnown RBP11.01□□□□□ -0.65
PSMC6-215ENST00000557517 MSI1O43347 362 aaKnown RBP11.01□□□□□ -0.65
PSMC6-215ENST00000557517 MED7O43513 233 aa11.01□□□□□ -0.65
PSMC6-215ENST00000557517 ACSL4O60488 711 aa11.01□□□□□ -0.65
PSMC6-215ENST00000557517 TSPAN3O60637 253 aa11.01□□□□□ -0.65
PSMC6-215ENST00000557517 IGLV3-19P01714 112 aa11.01□□□□□ -0.65
PSMC6-215ENST00000557517 NCAM1P13591 858 aa11.01□□□□□ -0.65
PSMC6-215ENST00000557517 PRKCSHP14314 528 aaPredicted RBP11.01□□□□□ -0.65
PSMC6-215ENST00000557517 ITPKAP23677 461 aa11.01□□□□□ -0.65
PSMC6-215ENST00000557517 PON1P27169 355 aa11.01□□□□□ -0.65
PSMC6-215ENST00000557517 SLC11A2P49281 568 aa11.01□□□□□ -0.65
PSMC6-215ENST00000557517 YWHAZP63104 245 aaKnown RBP11.01□□□□□ -0.65
PSMC6-215ENST00000557517 RPL6Q02878 288 aaKnown RBP11.01□□□□□ -0.65
PSMC6-215ENST00000557517 ZNF33AQ06730 810 aa11.01□□□□□ -0.65
PSMC6-215ENST00000557517 LMAN2Q12907 356 aa11.01□□□□□ -0.65
PSMC6-215ENST00000557517 NNTQ13423 1086 aa11.01□□□□□ -0.65
PSMC6-215ENST00000557517 ZNF234Q14588 700 aa11.01□□□□□ -0.65
PSMC6-215ENST00000557517 FAM133BQ5BKY9 247 aaKnown RBP11.01□□□□□ -0.65
PSMC6-215ENST00000557517 NUGGCQ68CJ6 796 aa11.01□□□□□ -0.65
PSMC6-215ENST00000557517 DENND1BQ6P3S1 775 aa11.01□□□□□ -0.65
PSMC6-215ENST00000557517 GBP6Q6ZN66 633 aa11.01□□□□□ -0.65
PSMC6-215ENST00000557517 TMPRSS6Q8IU80 811 aa11.01□□□□□ -0.65
PSMC6-215ENST00000557517 CEP76Q8TAP6 659 aa11.01□□□□□ -0.65
PSMC6-215ENST00000557517 GOLGA1Q92805 767 aa11.01□□□□□ -0.65
PSMC6-215ENST00000557517 LMLNQ96KR4 655 aa11.01□□□□□ -0.65
PSMC6-215ENST00000557517 EDEM2Q9BV94 578 aa11.01□□□□□ -0.65
PSMC6-215ENST00000557517 ACP6Q9NPH0 428 aa11.01□□□□□ -0.65
PSMC6-215ENST00000557517 WSB2Q9NYS7 404 aaPredicted RBP11.01□□□□□ -0.65
PSMC6-215ENST00000557517 USP36Q9P275 1121 aaKnown RBP11.01□□□□□ -0.65
PSMC6-215ENST00000557517 APEX2Q9UBZ4 518 aa11.01□□□□□ -0.65
PSMC6-215ENST00000557517 CYTH4Q9UIA0 394 aa11.01□□□□□ -0.65
PSMC6-215ENST00000557517 TSR3Q9UJK0 312 aaKnown RBP11.01□□□□□ -0.65
PSMC6-215ENST00000557517 NAALADL1Q9UQQ1 740 aa11.01□□□□□ -0.65
PSMC6-215ENST00000557517 TLR6Q9Y2C9 796 aa11.01□□□□□ -0.65
PSMC6-215ENST00000557517 AKAP13Q12802 2813 aa11□□□□□ -0.65
PSMC6-215ENST00000557517 GOLGA6L7A0A1B0GV03 622 aa11□□□□□ -0.65
PSMC6-215ENST00000557517 SYNCRIPO60506 623 aaKnown RBP11□□□□□ -0.65
PSMC6-215ENST00000557517 LETM1O95202 739 aaPredicted RBP11□□□□□ -0.65
PSMC6-215ENST00000557517 KCNK5O95279 499 aa11□□□□□ -0.65
PSMC6-215ENST00000557517 KRT5P13647 590 aa11□□□□□ -0.65
PSMC6-215ENST00000557517 ERCC5P28715 1186 aaPredicted RBP11□□□□□ -0.65
PSMC6-215ENST00000557517 SLC6A4P31645 630 aa11□□□□□ -0.65
PSMC6-215ENST00000557517 COPAP53621 1224 aa11□□□□□ -0.65
PSMC6-215ENST00000557517 TBX4P57082 545 aa11□□□□□ -0.65
PSMC6-215ENST00000557517 CAMK2GQ13555 558 aaPredicted RBP11□□□□□ -0.65
PSMC6-215ENST00000557517 STARD3Q14849 445 aa11□□□□□ -0.65
PSMC6-215ENST00000557517 PTPRNQ16849 979 aa11□□□□□ -0.65
PSMC6-215ENST00000557517 EXOC3L4Q17RC7 722 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms