RNA–Protein interactions for RNA: ENST00000557439.5

XRCC3-218, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 2,599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-218ENST00000557439 ANKRD52Q8NB46 1076 aa18.25■□□□□ 0.51
XRCC3-218ENST00000557439 SMC1BQ8NDV3 1235 aa18.25■□□□□ 0.51
XRCC3-218ENST00000557439 TMEM40Q8WWA1 233 aa18.25■□□□□ 0.51
XRCC3-218ENST00000557439 ARNTL2Q8WYA1 636 aa18.25■□□□□ 0.51
XRCC3-218ENST00000557439 AZIN2Q96A70 460 aa18.25■□□□□ 0.51
XRCC3-218ENST00000557439 P2RY11Q96G91 374 aa18.25■□□□□ 0.51
XRCC3-218ENST00000557439 FRMD8Q9BZ67 464 aaPredicted RBP18.25■□□□□ 0.51
XRCC3-218ENST00000557439 TRIM6Q9C030 488 aaPredicted RBP18.25■□□□□ 0.51
XRCC3-218ENST00000557439 XPNPEP3Q9NQH7 507 aa18.25■□□□□ 0.51
XRCC3-218ENST00000557439 BRCA2P51587 3418 aa18.25■□□□□ 0.51
XRCC3-218ENST00000557439 PGGT1BP53609 377 aa18.25■□□□□ 0.51
XRCC3-218ENST00000557439 HIC1Q14526 733 aa18.25■□□□□ 0.51
XRCC3-218ENST00000557439 OTUD1Q5VV17 481 aaPredicted RBP18.25■□□□□ 0.51
XRCC3-218ENST00000557439 SYPL2Q5VXT5 272 aa18.25■□□□□ 0.51
XRCC3-218ENST00000557439 SLC27A1Q6PCB7 646 aa18.25■□□□□ 0.51
XRCC3-218ENST00000557439 HFE2Q6ZVN8 426 aa18.25■□□□□ 0.51
XRCC3-218ENST00000557439 CMC1Q7Z7K0 106 aa18.25■□□□□ 0.51
XRCC3-218ENST00000557439 RSPH3Q86UC2 560 aa18.25■□□□□ 0.51
XRCC3-218ENST00000557439 PIGZQ86VD9 579 aa18.25■□□□□ 0.51
XRCC3-218ENST00000557439 NME8Q8N427 588 aa18.25■□□□□ 0.51
XRCC3-218ENST00000557439 BEST2Q8NFU1 509 aa18.25■□□□□ 0.51
XRCC3-218ENST00000557439 THTPAQ9BU02 230 aa18.25■□□□□ 0.51
XRCC3-218ENST00000557439 KATNBL1Q9H079 304 aa18.25■□□□□ 0.51
XRCC3-218ENST00000557439 ADAMTS10Q9H324 1103 aa18.25■□□□□ 0.51
XRCC3-218ENST00000557439 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.25■□□□□ 0.51
XRCC3-218ENST00000557439 DNAJC16Q9Y2G8 782 aa18.25■□□□□ 0.51
XRCC3-218ENST00000557439 BPTFQ12830 3046 aa18.24■□□□□ 0.51
XRCC3-218ENST00000557439 HNRNPCL1O60812 293 aaKnown RBP18.24■□□□□ 0.51
XRCC3-218ENST00000557439 SNNO75324 88 aaPredicted RBP18.24■□□□□ 0.51
XRCC3-218ENST00000557439 ATP6V1C1P21283 382 aa18.24■□□□□ 0.51
XRCC3-218ENST00000557439 VWA5B1Q5TIE3 1220 aa18.24■□□□□ 0.51
XRCC3-218ENST00000557439 PACS1Q6VY07 963 aa18.24■□□□□ 0.51
XRCC3-218ENST00000557439 HACE1Q8IYU2 909 aa18.24■□□□□ 0.51
XRCC3-218ENST00000557439 RNF169Q8NCN4 708 aa18.24■□□□□ 0.51
XRCC3-218ENST00000557439 LRRC39Q96DD0 335 aa18.24■□□□□ 0.51
XRCC3-218ENST00000557439 MOCOSQ96EN8 888 aa18.24■□□□□ 0.51
XRCC3-218ENST00000557439 XAB2Q9HCS7 855 aaKnown RBP18.24■□□□□ 0.51
XRCC3-218ENST00000557439 A0A0A0MRY4 1105 aa18.24■□□□□ 0.51
XRCC3-218ENST00000557439 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.24■□□□□ 0.51
XRCC3-218ENST00000557439 NVLO15381 856 aaKnown RBP18.24■□□□□ 0.51
XRCC3-218ENST00000557439 DGKIO75912 1065 aa18.24■□□□□ 0.51
XRCC3-218ENST00000557439 MMP3P08254 477 aa18.24■□□□□ 0.51
XRCC3-218ENST00000557439 SETSIPP0DME0 302 aa18.24■□□□□ 0.51
XRCC3-218ENST00000557439 BCAT1P54687 386 aa18.24■□□□□ 0.51
XRCC3-218ENST00000557439 FBXO47Q5MNV8 452 aa18.24■□□□□ 0.51
XRCC3-218ENST00000557439 PRAMEF19Q5SWL8 479 aa18.24■□□□□ 0.51
XRCC3-218ENST00000557439 OSTM1Q86WC4 334 aa18.24■□□□□ 0.51
XRCC3-218ENST00000557439 PGBD4Q96DM1 585 aa18.24■□□□□ 0.51
XRCC3-218ENST00000557439 ZNF333Q96JL9 665 aa18.24■□□□□ 0.51
XRCC3-218ENST00000557439 SPATA13Q96N96 652 aa18.24■□□□□ 0.51
XRCC3-218ENST00000557439 OLFM3Q96PB7 478 aa18.24■□□□□ 0.51
XRCC3-218ENST00000557439 KPNA7A9QM74 516 aa18.23■□□□□ 0.51
XRCC3-218ENST00000557439 FAM72CH0Y354 149 aa18.23■□□□□ 0.51
XRCC3-218ENST00000557439 MAP3K13O43283 966 aa18.23■□□□□ 0.51
XRCC3-218ENST00000557439 SORBS2O94875 1100 aaKnown RBP18.23■□□□□ 0.51
XRCC3-218ENST00000557439 DESP17661 470 aa18.23■□□□□ 0.51
XRCC3-218ENST00000557439 ARL4AP40617 200 aa18.23■□□□□ 0.51
XRCC3-218ENST00000557439 MXRA7P84157 204 aa18.23■□□□□ 0.51
XRCC3-218ENST00000557439 PEX6Q13608 980 aa18.23■□□□□ 0.51
XRCC3-218ENST00000557439 KYAT1Q16773 422 aa18.23■□□□□ 0.51
XRCC3-218ENST00000557439 FAM72AQ5TYM5 149 aa18.23■□□□□ 0.51
XRCC3-218ENST00000557439 ARHGAP17Q68EM7 881 aa18.23■□□□□ 0.51
XRCC3-218ENST00000557439 FAM72DQ6L9T8 149 aa18.23■□□□□ 0.51
XRCC3-218ENST00000557439 FAM72BQ86X60 149 aa18.23■□□□□ 0.51
XRCC3-218ENST00000557439 SCG3Q8WXD2 468 aaKnown RBP18.23■□□□□ 0.51
XRCC3-218ENST00000557439 OXCT2Q9BYC2 517 aaPredicted RBP18.23■□□□□ 0.51
XRCC3-218ENST00000557439 PRDM12Q9H4Q4 367 aa18.23■□□□□ 0.51
XRCC3-218ENST00000557439 BATF3Q9NR55 127 aa18.23■□□□□ 0.51
XRCC3-218ENST00000557439 PNPOQ9NVS9 261 aa18.23■□□□□ 0.51
XRCC3-218ENST00000557439 RNF181Q9P0P0 153 aa18.23■□□□□ 0.51
XRCC3-218ENST00000557439 FZD10Q9ULW2 581 aa18.23■□□□□ 0.51
XRCC3-218ENST00000557439 MRPL42Q9Y6G3 142 aaKnown RBP18.23■□□□□ 0.51
XRCC3-218ENST00000557439 NUP205Q92621 2012 aa18.23■□□□□ 0.51
XRCC3-218ENST00000557439 SMIM28A0A1B0GU29 152 aa18.23■□□□□ 0.51
XRCC3-218ENST00000557439 IL1BP01584 269 aa18.23■□□□□ 0.51
XRCC3-218ENST00000557439 PRKCGP05129 697 aa18.23■□□□□ 0.51
XRCC3-218ENST00000557439 C6orf222P0C671 652 aaPredicted RBP18.23■□□□□ 0.51
XRCC3-218ENST00000557439 FGF3P11487 239 aaPredicted RBP18.23■□□□□ 0.51
XRCC3-218ENST00000557439 CAPRIN2Q6IMN6 1127 aaKnown RBP18.23■□□□□ 0.51
XRCC3-218ENST00000557439 C10orf107Q8IVU9 208 aa18.23■□□□□ 0.51
XRCC3-218ENST00000557439 KBTBD2Q8IY47 623 aa18.23■□□□□ 0.51
XRCC3-218ENST00000557439 TTC39CQ8N584 583 aa18.23■□□□□ 0.51
XRCC3-218ENST00000557439 OR6J1Q8NGC5 347 aa18.23■□□□□ 0.51
XRCC3-218ENST00000557439 MTBPQ96DY7 904 aa18.23■□□□□ 0.51
XRCC3-218ENST00000557439 CCDC106Q9BWC9 280 aa18.23■□□□□ 0.51
XRCC3-218ENST00000557439 WWP1Q9H0M0 922 aa18.23■□□□□ 0.51
XRCC3-218ENST00000557439 SNX25Q9H3E2 840 aa18.23■□□□□ 0.51
XRCC3-218ENST00000557439 ANLNQ9NQW6 1124 aa18.23■□□□□ 0.51
XRCC3-218ENST00000557439 PIN4Q9Y237 131 aaKnown RBP18.23■□□□□ 0.51
XRCC3-218ENST00000557439 CCDC78A2IDD5 438 aa18.22■□□□□ 0.51
XRCC3-218ENST00000557439 DPPA5A6NC42 116 aa18.22■□□□□ 0.51
XRCC3-218ENST00000557439 GPR32O75388 356 aa18.22■□□□□ 0.51
XRCC3-218ENST00000557439 NR2C2P49116 596 aa18.22■□□□□ 0.51
XRCC3-218ENST00000557439 NIPAL4Q0D2K0 466 aa18.22■□□□□ 0.51
XRCC3-218ENST00000557439 DCAF4L1Q3SXM0 396 aa18.22■□□□□ 0.51
XRCC3-218ENST00000557439 TEDDM1Q5T9Z0 273 aa18.22■□□□□ 0.51
XRCC3-218ENST00000557439 MBLAC2Q68D91 279 aa18.22■□□□□ 0.51
XRCC3-218ENST00000557439 FASTKD5Q7L8L6 764 aaKnown RBP18.22■□□□□ 0.51
XRCC3-218ENST00000557439 MAVSQ7Z434 540 aa18.22■□□□□ 0.51
XRCC3-218ENST00000557439 NT5DC4Q86YG4 428 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms