RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 PRR23D1E9PI22 279 aaPredicted RBP4.84□□□□□ -1.63
VRK1-207ENST00000557352 KIR2DS3K7RE56 304 aa4.84□□□□□ -1.63
VRK1-207ENST00000557352 PRR23D2P0DMB1 279 aaPredicted RBP4.84□□□□□ -1.63
VRK1-207ENST00000557352 GABRB3P28472 473 aa4.84□□□□□ -1.63
VRK1-207ENST00000557352 SLC8A1P32418 973 aa4.84□□□□□ -1.63
VRK1-207ENST00000557352 PGM5Q15124 567 aa4.84□□□□□ -1.63
VRK1-207ENST00000557352 SLC5A9Q2M3M2 681 aa4.84□□□□□ -1.63
VRK1-207ENST00000557352 SMTNL2Q2TAL5 461 aa4.84□□□□□ -1.63
VRK1-207ENST00000557352 ANXA2RQ3ZCQ2 193 aa4.84□□□□□ -1.63
VRK1-207ENST00000557352 GLE1Q53GS7 698 aaKnown RBP4.84□□□□□ -1.63
VRK1-207ENST00000557352 TTLL5Q6EMB2 1281 aa4.84□□□□□ -1.63
VRK1-207ENST00000557352 DHRS13Q6UX07 377 aa4.84□□□□□ -1.63
VRK1-207ENST00000557352 TMEM199Q8N511 208 aa4.84□□□□□ -1.63
VRK1-207ENST00000557352 SNX27Q96L92 541 aa4.84□□□□□ -1.63
VRK1-207ENST00000557352 COLEC11Q9BWP8 271 aa4.84□□□□□ -1.63
VRK1-207ENST00000557352 TRIM2Q9C040 744 aa4.84□□□□□ -1.63
VRK1-207ENST00000557352 MRPL44Q9H9J2 332 aaKnown RBP4.84□□□□□ -1.63
VRK1-207ENST00000557352 IPO11Q9UI26 975 aaKnown RBP4.84□□□□□ -1.63
VRK1-207ENST00000557352 SGPL1O95470 568 aa4.83□□□□□ -1.64
VRK1-207ENST00000557352 T-ENOLP0DO92 83 aa4.83□□□□□ -1.64
VRK1-207ENST00000557352 AKR1A1P14550 325 aa4.83□□□□□ -1.64
VRK1-207ENST00000557352 HOXB2P14652 356 aa4.83□□□□□ -1.64
VRK1-207ENST00000557352 PECAM1P16284 738 aaPredicted RBP4.83□□□□□ -1.64
VRK1-207ENST00000557352 TBXAS1P24557 533 aaPredicted RBP4.83□□□□□ -1.64
VRK1-207ENST00000557352 POLD2P49005 469 aa4.83□□□□□ -1.64
VRK1-207ENST00000557352 PPATQ06203 517 aa4.83□□□□□ -1.64
VRK1-207ENST00000557352 PTGR1Q14914 329 aa4.83□□□□□ -1.64
VRK1-207ENST00000557352 DLGAP5Q15398 846 aa4.83□□□□□ -1.64
VRK1-207ENST00000557352 ODF3L2Q3SX64 289 aa4.83□□□□□ -1.64
VRK1-207ENST00000557352 ARHGAP15Q53QZ3 475 aa4.83□□□□□ -1.64
VRK1-207ENST00000557352 PIK3CD-AS1Q5SR53 167 aa4.83□□□□□ -1.64
VRK1-207ENST00000557352 LIPMQ5VYY2 423 aa4.83□□□□□ -1.64
VRK1-207ENST00000557352 NUGGCQ68CJ6 796 aa4.83□□□□□ -1.64
VRK1-207ENST00000557352 ZNF474Q6S9Z5 364 aaPredicted RBP4.83□□□□□ -1.64
VRK1-207ENST00000557352 ZFPM2Q8WW38 1151 aa4.83□□□□□ -1.64
VRK1-207ENST00000557352 GRAMD1AQ96CP6 724 aa4.83□□□□□ -1.64
VRK1-207ENST00000557352 EIF3CQ99613 913 aaKnown RBP4.83□□□□□ -1.64
VRK1-207ENST00000557352 GDF15Q99988 308 aa4.83□□□□□ -1.64
VRK1-207ENST00000557352 NUDT22Q9BRQ3 303 aa4.83□□□□□ -1.64
VRK1-207ENST00000557352 ELOVL1Q9BW60 279 aa4.83□□□□□ -1.64
VRK1-207ENST00000557352 ERVK-5Q9HDB9 667 aa4.83□□□□□ -1.64
VRK1-207ENST00000557352 ANAPC4Q9UJX5 808 aa4.83□□□□□ -1.64
VRK1-207ENST00000557352 ABCC9O60706 1549 aa4.82□□□□□ -1.64
VRK1-207ENST00000557352 SHROOM4Q9ULL8 1493 aa4.82□□□□□ -1.64
VRK1-207ENST00000557352 APOL1O14791 398 aa4.82□□□□□ -1.64
VRK1-207ENST00000557352 NDST3O95803 873 aa4.82□□□□□ -1.64
VRK1-207ENST00000557352 VIPP01282 170 aa4.82□□□□□ -1.64
VRK1-207ENST00000557352 RFPL3SP0C7P2 107 aa4.82□□□□□ -1.64
VRK1-207ENST00000557352 SLC5A1P13866 664 aa4.82□□□□□ -1.64
VRK1-207ENST00000557352 IDEP14735 1019 aa4.82□□□□□ -1.64
VRK1-207ENST00000557352 EGR1P18146 543 aa4.82□□□□□ -1.64
VRK1-207ENST00000557352 STT3AP46977 705 aa4.82□□□□□ -1.64
VRK1-207ENST00000557352 PRIM2P49643 509 aa4.82□□□□□ -1.64
VRK1-207ENST00000557352 P2RX3P56373 397 aa4.82□□□□□ -1.64
VRK1-207ENST00000557352 P3H1Q32P28 736 aa4.82□□□□□ -1.64
VRK1-207ENST00000557352 C16orf89Q6UX73 402 aa4.82□□□□□ -1.64
VRK1-207ENST00000557352 PMM1Q92871 262 aa4.82□□□□□ -1.64
VRK1-207ENST00000557352 EME1Q96AY2 570 aa4.82□□□□□ -1.64
VRK1-207ENST00000557352 GPR78Q96P69 363 aa4.82□□□□□ -1.64
VRK1-207ENST00000557352 ZPBPQ9BS86 351 aa4.82□□□□□ -1.64
VRK1-207ENST00000557352 FZD3Q9NPG1 666 aa4.82□□□□□ -1.64
VRK1-207ENST00000557352 UTS2RQ9UKP6 389 aa4.82□□□□□ -1.64
VRK1-207ENST00000557352 B3GNT3Q9Y2A9 372 aa4.82□□□□□ -1.64
VRK1-207ENST00000557352 MAN2B2Q9Y2E5 1009 aa4.82□□□□□ -1.64
VRK1-207ENST00000557352 A6NNC1 897 aa4.81□□□□□ -1.64
VRK1-207ENST00000557352 DHHO43323 396 aa4.81□□□□□ -1.64
VRK1-207ENST00000557352 WNT1P04628 370 aa4.81□□□□□ -1.64
VRK1-207ENST00000557352 CDC25AP30304 524 aa4.81□□□□□ -1.64
VRK1-207ENST00000557352 PGGT1BP53609 377 aa4.81□□□□□ -1.64
VRK1-207ENST00000557352 TRAPPC11Q7Z392 1133 aa4.81□□□□□ -1.64
VRK1-207ENST00000557352 ANKRD13AQ8IZ07 590 aa4.81□□□□□ -1.64
VRK1-207ENST00000557352 SMRP1Q8NCR6 262 aa4.81□□□□□ -1.64
VRK1-207ENST00000557352 ZNF479Q96JC4 524 aa4.81□□□□□ -1.64
VRK1-207ENST00000557352 WDR83Q9BRX9 315 aaKnown RBP4.81□□□□□ -1.64
VRK1-207ENST00000557352 HTATIP2Q9BUP3 242 aa4.81□□□□□ -1.64
VRK1-207ENST00000557352 AAMDCQ9H7C9 122 aa4.81□□□□□ -1.64
VRK1-207ENST00000557352 LACTBL1A8MY62 500 aa4.8□□□□□ -1.64
VRK1-207ENST00000557352 SRGAP2BP0DMP2 458 aa4.8□□□□□ -1.64
VRK1-207ENST00000557352 CHRNB1P11230 501 aa4.8□□□□□ -1.64
VRK1-207ENST00000557352 ARRB2P32121 409 aa4.8□□□□□ -1.64
VRK1-207ENST00000557352 NSUN2Q08J23 767 aaKnown RBP eCLIP4.8□□□□□ -1.64
VRK1-207ENST00000557352 ZNF585BQ52M93 769 aa4.8□□□□□ -1.64
VRK1-207ENST00000557352 C6orf10Q5SRN2 563 aa4.8□□□□□ -1.64
VRK1-207ENST00000557352 ASPHD1Q5U4P2 390 aa4.8□□□□□ -1.64
VRK1-207ENST00000557352 ISM2Q6H9L7 571 aa4.8□□□□□ -1.64
VRK1-207ENST00000557352 KRT27Q7Z3Y8 459 aa4.8□□□□□ -1.64
VRK1-207ENST00000557352 FMNL3Q8IVF7 1028 aa4.8□□□□□ -1.64
VRK1-207ENST00000557352 RBMXL3Q8N7X1 1067 aaKnown RBP4.8□□□□□ -1.64
VRK1-207ENST00000557352 FAM47BQ8NA70 645 aa4.8□□□□□ -1.64
VRK1-207ENST00000557352 GLIS1Q8NBF1 620 aa4.8□□□□□ -1.64
VRK1-207ENST00000557352 CTAGE1Q96RT6 745 aa4.8□□□□□ -1.64
VRK1-207ENST00000557352 RGL1Q9NZL6 768 aa4.8□□□□□ -1.64
VRK1-207ENST00000557352 C4orf47A7E2U8 309 aa4.79□□□□□ -1.64
VRK1-207ENST00000557352 NPC1O15118 1278 aa4.79□□□□□ -1.64
VRK1-207ENST00000557352 SPTLC2O15270 562 aa4.79□□□□□ -1.64
VRK1-207ENST00000557352 SLC28A2O43868 658 aa4.79□□□□□ -1.64
VRK1-207ENST00000557352 KAT7O95251 611 aa4.79□□□□□ -1.64
VRK1-207ENST00000557352 CBFBQ13951 182 aa4.79□□□□□ -1.64
VRK1-207ENST00000557352 MAPKAPK3Q16644 382 aa4.79□□□□□ -1.64
VRK1-207ENST00000557352 ARL13BQ3SXY8 428 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms