RNA–Protein interactions for RNA: ENST00000557329.1

CHD8-212, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-212ENST00000557329 EPHA3P29320 983 aa4.5□□□□□ -1.69
CHD8-212ENST00000557329 LIPAP38571 399 aa4.5□□□□□ -1.69
CHD8-212ENST00000557329 SUMO3P55854 103 aaPredicted RBP4.5□□□□□ -1.69
CHD8-212ENST00000557329 EEFSECP57772 596 aaKnown RBP4.5□□□□□ -1.69
CHD8-212ENST00000557329 SUMO2P61956 95 aaKnown RBP4.5□□□□□ -1.69
CHD8-212ENST00000557329 MRPS21P82921 87 aaKnown RBP4.5□□□□□ -1.69
CHD8-212ENST00000557329 PLA1AQ53H76 456 aa4.5□□□□□ -1.69
CHD8-212ENST00000557329 ZNF362Q5T0B9 420 aaPredicted RBP4.5□□□□□ -1.69
CHD8-212ENST00000557329 FCRLBQ6BAA4 426 aa4.5□□□□□ -1.69
CHD8-212ENST00000557329 APOA5Q6Q788 366 aa4.5□□□□□ -1.69
CHD8-212ENST00000557329 SKAP1Q86WV1 359 aa4.5□□□□□ -1.69
CHD8-212ENST00000557329 DGKHQ86XP1 1220 aa4.5□□□□□ -1.69
CHD8-212ENST00000557329 ANKRD18AQ8IVF6 992 aa4.5□□□□□ -1.69
CHD8-212ENST00000557329 KRT78Q8N1N4 520 aa4.5□□□□□ -1.69
CHD8-212ENST00000557329 ZNF384Q8TF68 577 aa4.5□□□□□ -1.69
CHD8-212ENST00000557329 SOCS4Q8WXH5 440 aa4.5□□□□□ -1.69
CHD8-212ENST00000557329 C8orf48Q96LL4 319 aa4.5□□□□□ -1.69
CHD8-212ENST00000557329 DPCDQ9BVM2 203 aaPredicted RBP4.5□□□□□ -1.69
CHD8-212ENST00000557329 UNKQ9C0B0 810 aaKnown RBP4.5□□□□□ -1.69
CHD8-212ENST00000557329 C11orf49Q9H6J7 331 aa4.5□□□□□ -1.69
CHD8-212ENST00000557329 SMURF2Q9HAU4 748 aa4.5□□□□□ -1.69
CHD8-212ENST00000557329 ATP6V0A4Q9HBG4 840 aa4.5□□□□□ -1.69
CHD8-212ENST00000557329 GABRQQ9UN88 632 aa4.5□□□□□ -1.69
CHD8-212ENST00000557329 SSX2IPQ9Y2D8 614 aa4.5□□□□□ -1.69
CHD8-212ENST00000557329 LAS1LQ9Y4W2 734 aaKnown RBP4.5□□□□□ -1.69
CHD8-212ENST00000557329 HTTP42858 3142 aa4.5□□□□□ -1.69
CHD8-212ENST00000557329 A1L4Q6 167 aa4.49□□□□□ -1.69
CHD8-212ENST00000557329 MASP2O00187 686 aa4.49□□□□□ -1.69
CHD8-212ENST00000557329 TBX3O15119 743 aa4.49□□□□□ -1.69
CHD8-212ENST00000557329 PRKCGP05129 697 aa4.49□□□□□ -1.69
CHD8-212ENST00000557329 RHOP08100 348 aa4.49□□□□□ -1.69
CHD8-212ENST00000557329 IL6RP08887 468 aaPredicted RBP4.49□□□□□ -1.69
CHD8-212ENST00000557329 HMGB1P09429 215 aaKnown RBP4.49□□□□□ -1.69
CHD8-212ENST00000557329 CDK4P11802 303 aa4.49□□□□□ -1.69
CHD8-212ENST00000557329 MYCLP12524 364 aaPredicted RBP4.49□□□□□ -1.69
CHD8-212ENST00000557329 RHCEP18577 417 aa4.49□□□□□ -1.69
CHD8-212ENST00000557329 DRD4P21917 467 aa4.49□□□□□ -1.69
CHD8-212ENST00000557329 BCAT1P54687 386 aa4.49□□□□□ -1.69
CHD8-212ENST00000557329 PDE1AP54750 535 aa4.49□□□□□ -1.69
CHD8-212ENST00000557329 RHDQ02161 417 aa4.49□□□□□ -1.69
CHD8-212ENST00000557329 VGLL4Q14135 290 aa4.49□□□□□ -1.69
CHD8-212ENST00000557329 ARHGEF7Q14155 803 aa4.49□□□□□ -1.69
CHD8-212ENST00000557329 SLC29A2Q14542 456 aa4.49□□□□□ -1.69
CHD8-212ENST00000557329 LRRC41Q15345 812 aa4.49□□□□□ -1.69
CHD8-212ENST00000557329 TREML2Q5T2D2 321 aa4.49□□□□□ -1.69
CHD8-212ENST00000557329 FMNL3Q8IVF7 1028 aa4.49□□□□□ -1.69
CHD8-212ENST00000557329 RAVER1Q8IY67 606 aaKnown RBP4.49□□□□□ -1.69
CHD8-212ENST00000557329 IZUMO1Q8IYV9 350 aa4.49□□□□□ -1.69
CHD8-212ENST00000557329 ABRAQ8N0Z2 381 aa4.49□□□□□ -1.69
CHD8-212ENST00000557329 LRRC71Q8N4P6 559 aa4.49□□□□□ -1.69
CHD8-212ENST00000557329 FANCBQ8NB91 859 aa4.49□□□□□ -1.69
CHD8-212ENST00000557329 ATG4AQ8WYN0 398 aa4.49□□□□□ -1.69
CHD8-212ENST00000557329 SNX27Q96L92 541 aa4.49□□□□□ -1.69
CHD8-212ENST00000557329 CFAP53Q96M91 514 aa4.49□□□□□ -1.69
CHD8-212ENST00000557329 TRIM5Q9C035 493 aa4.49□□□□□ -1.69
CHD8-212ENST00000557329 SACM1LQ9NTJ5 587 aa4.49□□□□□ -1.69
CHD8-212ENST00000557329 MRPS18AQ9NVS2 196 aaKnown RBP4.49□□□□□ -1.69
CHD8-212ENST00000557329 ASB6Q9NWX5 421 aa4.49□□□□□ -1.69
CHD8-212ENST00000557329 USP22Q9UPT9 525 aa4.49□□□□□ -1.69
CHD8-212ENST00000557329 NUDCQ9Y266 331 aa4.49□□□□□ -1.69
CHD8-212ENST00000557329 PCDHAC2Q9Y5I4 1007 aa4.49□□□□□ -1.69
CHD8-212ENST00000557329 MYO3BQ8WXR4 1341 aa4.48□□□□□ -1.69
CHD8-212ENST00000557329 VWC2LB2RUY7 222 aa4.48□□□□□ -1.69
CHD8-212ENST00000557329 TARM1B6A8C7 271 aa4.48□□□□□ -1.69
CHD8-212ENST00000557329 H7C1Q1 480 aa4.48□□□□□ -1.69
CHD8-212ENST00000557329 PDHXO00330 501 aa4.48□□□□□ -1.69
CHD8-212ENST00000557329 TNPO2O14787 897 aaKnown RBP4.48□□□□□ -1.69
CHD8-212ENST00000557329 RASSF9O75901 435 aa4.48□□□□□ -1.69
CHD8-212ENST00000557329 ZKSCAN1P17029 563 aaPredicted RBP4.48□□□□□ -1.69
CHD8-212ENST00000557329 CERS1P27544 350 aa4.48□□□□□ -1.69
CHD8-212ENST00000557329 ITPKBP27987 946 aa4.48□□□□□ -1.69
CHD8-212ENST00000557329 PEX2P28328 305 aa4.48□□□□□ -1.69
CHD8-212ENST00000557329 CTGFP29279 349 aa4.48□□□□□ -1.69
CHD8-212ENST00000557329 CYP2C18P33260 490 aa4.48□□□□□ -1.69
CHD8-212ENST00000557329 C21orf58P58505 322 aa4.48□□□□□ -1.69
CHD8-212ENST00000557329 EIF4A1P60842 406 aaKnown RBP4.48□□□□□ -1.69
CHD8-212ENST00000557329 FMO1Q01740 532 aa4.48□□□□□ -1.69
CHD8-212ENST00000557329 SEMA5AQ13591 1074 aa4.48□□□□□ -1.69
CHD8-212ENST00000557329 PROSER3Q2NL68 480 aa4.48□□□□□ -1.69
CHD8-212ENST00000557329 CCDC152Q4G0S7 254 aa4.48□□□□□ -1.69
CHD8-212ENST00000557329 UBE2Q1Q7Z7E8 422 aa4.48□□□□□ -1.69
CHD8-212ENST00000557329 SIRT6Q8N6T7 355 aa4.48□□□□□ -1.69
CHD8-212ENST00000557329 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.48□□□□□ -1.69
CHD8-212ENST00000557329 FAM156AQ8NDB6 213 aa4.48□□□□□ -1.69
CHD8-212ENST00000557329 SEMA6DQ8NFY4 1073 aa4.48□□□□□ -1.69
CHD8-212ENST00000557329 BPIFB1Q8TDL5 484 aa4.48□□□□□ -1.69
CHD8-212ENST00000557329 PNISRQ8TF01 805 aaKnown RBP4.48□□□□□ -1.69
CHD8-212ENST00000557329 GLG1Q92896 1179 aa4.48□□□□□ -1.69
CHD8-212ENST00000557329 ZKSCAN4Q969J2 545 aaPredicted RBP4.48□□□□□ -1.69
CHD8-212ENST00000557329 PPP2R3CQ969Q6 453 aa4.48□□□□□ -1.69
CHD8-212ENST00000557329 PRMT6Q96LA8 375 aaPredicted RBP4.48□□□□□ -1.69
CHD8-212ENST00000557329 FSD1LQ9BXM9 530 aa4.48□□□□□ -1.69
CHD8-212ENST00000557329 EIF2AQ9BY44 585 aaKnown RBP4.48□□□□□ -1.69
CHD8-212ENST00000557329 INO80BQ9C086 356 aaPredicted RBP4.48□□□□□ -1.69
CHD8-212ENST00000557329 DUSP22Q9NRW4 184 aa4.48□□□□□ -1.69
CHD8-212ENST00000557329 TSPYL4Q9UJ04 414 aa4.48□□□□□ -1.69
CHD8-212ENST00000557329 CDY1Q9Y6F8 540 aa4.48□□□□□ -1.69
CHD8-212ENST00000557329 IBTKQ9P2D0 1353 aaPredicted RBP4.48□□□□□ -1.69
CHD8-212ENST00000557329 ZSWIM8A7E2V4 1837 aa4.48□□□□□ -1.69
CHD8-212ENST00000557329 MGST3O14880 152 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms