RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 SLC35G2Q8TBE7 412 aa9.03□□□□□ -0.96
SYNE3-205ENST00000557275 CLEC4AQ9UMR7 237 aa9.03□□□□□ -0.96
SYNE3-205ENST00000557275 SGTAO43765 313 aa9.03□□□□□ -0.96
SYNE3-205ENST00000557275 SEC24BO95487 1268 aa9.03□□□□□ -0.96
SYNE3-205ENST00000557275 CRABP2P29373 138 aa9.03□□□□□ -0.96
SYNE3-205ENST00000557275 NR2C2P49116 596 aa9.03□□□□□ -0.96
SYNE3-205ENST00000557275 GEMP55040 296 aa9.03□□□□□ -0.96
SYNE3-205ENST00000557275 TMBIM6P55061 237 aa9.03□□□□□ -0.96
SYNE3-205ENST00000557275 PAGE2BQ5JRK9 111 aa9.03□□□□□ -0.96
SYNE3-205ENST00000557275 STK40Q8N2I9 435 aa9.03□□□□□ -0.96
SYNE3-205ENST00000557275 KBTBD7Q8WVZ9 684 aa9.03□□□□□ -0.96
SYNE3-205ENST00000557275 RERGLQ9H628 205 aa9.03□□□□□ -0.96
SYNE3-205ENST00000557275 INTS7Q9NVH2 962 aaKnown RBP9.03□□□□□ -0.96
SYNE3-205ENST00000557275 GNPTGQ9UJJ9 305 aa9.03□□□□□ -0.96
SYNE3-205ENST00000557275 BBOX1O75936 387 aa9.03□□□□□ -0.96
SYNE3-205ENST00000557275 ROGDIQ9GZN7 287 aa9.03□□□□□ -0.96
SYNE3-205ENST00000557275 PRELID1Q9Y255 219 aa9.03□□□□□ -0.96
SYNE3-205ENST00000557275 TMEM5Q9Y2B1 443 aa9.03□□□□□ -0.96
SYNE3-205ENST00000557275 RPS6KL1Q9Y6S9 549 aa9.03□□□□□ -0.96
SYNE3-205ENST00000557275 HSD3B1P14060 373 aa9.03□□□□□ -0.96
SYNE3-205ENST00000557275 ITGALP20701 1170 aa9.03□□□□□ -0.96
SYNE3-205ENST00000557275 ADSSP30520 456 aa9.03□□□□□ -0.96
SYNE3-205ENST00000557275 ARL3P36405 182 aa9.03□□□□□ -0.96
SYNE3-205ENST00000557275 ZNHIT3Q15649 155 aaPredicted RBP9.03□□□□□ -0.96
SYNE3-205ENST00000557275 RFTN2Q52LD8 501 aaPredicted RBP9.03□□□□□ -0.96
SYNE3-205ENST00000557275 QSOX2Q6ZRP7 698 aa9.03□□□□□ -0.96
SYNE3-205ENST00000557275 MCOLN3Q8TDD5 553 aa9.03□□□□□ -0.96
SYNE3-205ENST00000557275 INTS2Q9H0H0 1204 aaKnown RBP9.03□□□□□ -0.96
SYNE3-205ENST00000557275 AAASQ9NRG9 546 aa9.03□□□□□ -0.96
SYNE3-205ENST00000557275 ENTPD4Q9Y227 616 aa9.03□□□□□ -0.96
SYNE3-205ENST00000557275 SFRP1Q8N474 314 aa9.03□□□□□ -0.96
SYNE3-205ENST00000557275 USP38Q8NB14 1042 aa9.03□□□□□ -0.96
SYNE3-205ENST00000557275 SERAC1Q96JX3 654 aa9.03□□□□□ -0.96
SYNE3-205ENST00000557275 LRRC4BQ9NT99 713 aa9.03□□□□□ -0.96
SYNE3-205ENST00000557275 IGSF9BQ9UPX0 1349 aa9.03□□□□□ -0.96
SYNE3-205ENST00000557275 DGAT1O75907 488 aa9.02□□□□□ -0.96
SYNE3-205ENST00000557275 SUPT7LO94864 414 aa9.02□□□□□ -0.96
SYNE3-205ENST00000557275 ME2P23368 584 aa9.02□□□□□ -0.96
SYNE3-205ENST00000557275 PYDC2Q56P42 97 aa9.02□□□□□ -0.96
SYNE3-205ENST00000557275 KCTD1Q719H9 257 aa9.02□□□□□ -0.96
SYNE3-205ENST00000557275 DNAJB7Q7Z6W7 309 aaPredicted RBP9.02□□□□□ -0.96
SYNE3-205ENST00000557275 JAMLQ86YT9 394 aa9.02□□□□□ -0.96
SYNE3-205ENST00000557275 BHMTQ93088 406 aa9.02□□□□□ -0.96
SYNE3-205ENST00000557275 DPP7Q9UHL4 492 aa9.02□□□□□ -0.96
SYNE3-205ENST00000557275 ZNF221Q9UK13 617 aa9.02□□□□□ -0.96
SYNE3-205ENST00000557275 AK5Q9Y6K8 562 aa9.02□□□□□ -0.96
SYNE3-205ENST00000557275 KYAT3Q6YP21 454 aaKnown RBP9.02□□□□□ -0.96
SYNE3-205ENST00000557275 EMSYQ7Z589 1322 aa9.02□□□□□ -0.96
SYNE3-205ENST00000557275 FAM126BQ8IXS8 530 aa9.02□□□□□ -0.96
SYNE3-205ENST00000557275 USP7Q93009 1102 aa9.02□□□□□ -0.96
SYNE3-205ENST00000557275 GAL3ST3Q96A11 431 aa9.02□□□□□ -0.96
SYNE3-205ENST00000557275 PTCD3Q96EY7 689 aaKnown RBP9.02□□□□□ -0.96
SYNE3-205ENST00000557275 PNMA6EA0A0J9YXQ4 647 aa9.02□□□□□ -0.97
SYNE3-205ENST00000557275 DDHD2O94830 711 aa9.02□□□□□ -0.97
SYNE3-205ENST00000557275 CCNB2O95067 398 aa9.02□□□□□ -0.97
SYNE3-205ENST00000557275 SERPINF2P08697 491 aa9.02□□□□□ -0.97
SYNE3-205ENST00000557275 MYBL2P10244 700 aa9.02□□□□□ -0.97
SYNE3-205ENST00000557275 OCLNQ16625 522 aa9.02□□□□□ -0.97
SYNE3-205ENST00000557275 BCS1LQ9Y276 419 aa9.02□□□□□ -0.97
SYNE3-205ENST00000557275 NUAK1O60285 661 aa9.02□□□□□ -0.97
SYNE3-205ENST00000557275 DSG3P32926 999 aa9.02□□□□□ -0.97
SYNE3-205ENST00000557275 RPL9P32969 192 aaKnown RBP9.02□□□□□ -0.97
SYNE3-205ENST00000557275 RPL5P46777 297 aaKnown RBP9.02□□□□□ -0.97
SYNE3-205ENST00000557275 CCR3P51677 355 aa9.02□□□□□ -0.97
SYNE3-205ENST00000557275 MAPK7Q13164 816 aa9.02□□□□□ -0.97
SYNE3-205ENST00000557275 TMCO6Q96DC7 493 aa9.02□□□□□ -0.97
SYNE3-205ENST00000557275 ABCA8O94911 1581 aa9.02□□□□□ -0.97
SYNE3-205ENST00000557275 ASS1P00966 412 aaKnown RBP9.02□□□□□ -0.97
SYNE3-205ENST00000557275 MZF1P28698 734 aaPredicted RBP9.02□□□□□ -0.97
SYNE3-205ENST00000557275 CHRNA5P30532 468 aa9.02□□□□□ -0.97
SYNE3-205ENST00000557275 IL31Q6EBC2 164 aa9.02□□□□□ -0.97
SYNE3-205ENST00000557275 BRINP3Q76B58 766 aa9.02□□□□□ -0.97
SYNE3-205ENST00000557275 ENGASEQ8NFI3 743 aa9.02□□□□□ -0.97
SYNE3-205ENST00000557275 GGA2Q9UJY4 613 aa9.02□□□□□ -0.97
SYNE3-205ENST00000557275 SAMD4AQ9UPU9 718 aaKnown RBP9.02□□□□□ -0.97
SYNE3-205ENST00000557275 PLOD3O60568 738 aa9.02□□□□□ -0.97
SYNE3-205ENST00000557275 CHRNDQ07001 517 aa9.02□□□□□ -0.97
SYNE3-205ENST00000557275 PHACTR4Q8IZ21 702 aa9.02□□□□□ -0.97
SYNE3-205ENST00000557275 C4orf33Q8N1A6 199 aa9.02□□□□□ -0.97
SYNE3-205ENST00000557275 CAMKK1Q8N5S9 505 aa9.02□□□□□ -0.97
SYNE3-205ENST00000557275 SLC6A15Q9H2J7 730 aa9.02□□□□□ -0.97
SYNE3-205ENST00000557275 V9GYQ6 96 aa9.02□□□□□ -0.97
SYNE3-205ENST00000557275 ARID1BQ8NFD5 2236 aaPredicted RBP9.02□□□□□ -0.97
SYNE3-205ENST00000557275 CHRDL2Q6WN34 429 aa9.02□□□□□ -0.97
SYNE3-205ENST00000557275 ZNF554Q86TJ5 538 aa9.02□□□□□ -0.97
SYNE3-205ENST00000557275 CLVS1Q8IUQ0 354 aaPredicted RBP9.02□□□□□ -0.97
SYNE3-205ENST00000557275 BTBD10Q9BSF8 475 aa9.02□□□□□ -0.97
SYNE3-205ENST00000557275 ABT1Q9ULW3 272 aaKnown RBP9.02□□□□□ -0.97
SYNE3-205ENST00000557275 RBM7Q9Y580 266 aaKnown RBP9.02□□□□□ -0.97
SYNE3-205ENST00000557275 NR5A2O00482 541 aa9.02□□□□□ -0.97
SYNE3-205ENST00000557275 IFNGP01579 166 aa9.02□□□□□ -0.97
SYNE3-205ENST00000557275 GSTT1P30711 240 aa9.02□□□□□ -0.97
SYNE3-205ENST00000557275 CAV3P56539 151 aa9.02□□□□□ -0.97
SYNE3-205ENST00000557275 SCN1BQ07699 218 aa9.02□□□□□ -0.97
SYNE3-205ENST00000557275 RHEBQ15382 184 aa9.02□□□□□ -0.97
SYNE3-205ENST00000557275 SKIV2LQ15477 1246 aaKnown RBP9.02□□□□□ -0.97
SYNE3-205ENST00000557275 ZFP28Q8NHY6 868 aa9.02□□□□□ -0.97
SYNE3-205ENST00000557275 GDAQ9Y2T3 454 aa9.02□□□□□ -0.97
SYNE3-205ENST00000557275 MROH7-TTC4A0A0A0MT08 1334 aa9.02□□□□□ -0.97
SYNE3-205ENST00000557275 MPZL2O60487 215 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms