RNA–Protein interactions for RNA: ENST00000557265.5

SNX6-209, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-209ENST00000557265 UBL7Q96S82 380 aaPredicted RBP12.85□□□□□ -0.35
SNX6-209ENST00000557265 ORAI3Q9BRQ5 295 aa12.85□□□□□ -0.35
SNX6-209ENST00000557265 UBXN6Q9BZV1 441 aa12.85□□□□□ -0.35
SNX6-209ENST00000557265 SGK2Q9HBY8 427 aa12.85□□□□□ -0.35
SNX6-209ENST00000557265 PRSS16Q9NQE7 514 aa12.85□□□□□ -0.35
SNX6-209ENST00000557265 ABCB8Q9NUT2 735 aa12.85□□□□□ -0.35
SNX6-209ENST00000557265 EXOC1Q9NV70 894 aa12.85□□□□□ -0.35
SNX6-209ENST00000557265 SERTAD1Q9UHV2 236 aa12.85□□□□□ -0.35
SNX6-209ENST00000557265 E9PAM4 449 aa12.84□□□□□ -0.35
SNX6-209ENST00000557265 ZBED1O96006 694 aa12.84□□□□□ -0.35
SNX6-209ENST00000557265 DLDP09622 509 aaKnown RBP12.84□□□□□ -0.35
SNX6-209ENST00000557265 JUPP14923 745 aa12.84□□□□□ -0.35
SNX6-209ENST00000557265 ITPKBP27987 946 aa12.84□□□□□ -0.35
SNX6-209ENST00000557265 TKTL1P51854 596 aa12.84□□□□□ -0.35
SNX6-209ENST00000557265 C21orf59P57076 290 aa12.84□□□□□ -0.35
SNX6-209ENST00000557265 PPP3CAQ08209 521 aa12.84□□□□□ -0.35
SNX6-209ENST00000557265 C19orf57Q0VDD7 668 aa12.84□□□□□ -0.35
SNX6-209ENST00000557265 INAVAQ3KP66 663 aa12.84□□□□□ -0.35
SNX6-209ENST00000557265 FOXD4L6Q3SYB3 417 aaPredicted RBP12.84□□□□□ -0.35
SNX6-209ENST00000557265 KMT5BQ4FZB7 885 aa12.84□□□□□ -0.35
SNX6-209ENST00000557265 RESP18Q5W5W9 173 aa12.84□□□□□ -0.35
SNX6-209ENST00000557265 FOXD4L3Q6VB84 417 aaPredicted RBP12.84□□□□□ -0.35
SNX6-209ENST00000557265 GATAD2AQ86YP4 633 aa12.84□□□□□ -0.35
SNX6-209ENST00000557265 FMNL3Q8IVF7 1028 aa12.84□□□□□ -0.35
SNX6-209ENST00000557265 ZC3H3Q8IXZ2 948 aaKnown RBP12.84□□□□□ -0.35
SNX6-209ENST00000557265 NDRG1Q92597 394 aaKnown RBP12.84□□□□□ -0.35
SNX6-209ENST00000557265 PAGE5Q96GU1 130 aa12.84□□□□□ -0.35
SNX6-209ENST00000557265 ACE2Q9BYF1 805 aaPredicted RBP12.84□□□□□ -0.35
SNX6-209ENST00000557265 MMRN2Q9H8L6 949 aa12.84□□□□□ -0.35
SNX6-209ENST00000557265 FBRSQ9HAH7 460 aa12.84□□□□□ -0.35
SNX6-209ENST00000557265 GGA2Q9UJY4 613 aa12.84□□□□□ -0.35
SNX6-209ENST00000557265 PCDHA7Q9UN72 937 aa12.84□□□□□ -0.35
SNX6-209ENST00000557265 A0A1B0GTQ1 180 aa12.83□□□□□ -0.36
SNX6-209ENST00000557265 FAM47DPA6NHR8 397 aa12.83□□□□□ -0.36
SNX6-209ENST00000557265 CBX4O00257 560 aa12.83□□□□□ -0.36
SNX6-209ENST00000557265 VILLO15195 856 aa12.83□□□□□ -0.36
SNX6-209ENST00000557265 PAPSS1O43252 624 aaPredicted RBP12.83□□□□□ -0.36
SNX6-209ENST00000557265 CALUO43852 315 aaPredicted RBP12.83□□□□□ -0.36
SNX6-209ENST00000557265 DFNA5O60443 496 aa12.83□□□□□ -0.36
SNX6-209ENST00000557265 IGHV4-34P06331 123 aa12.83□□□□□ -0.36
SNX6-209ENST00000557265 ATP5BP06576 529 aaKnown RBP12.83□□□□□ -0.36
SNX6-209ENST00000557265 SLFN14P0C7P3 912 aa12.83□□□□□ -0.36
SNX6-209ENST00000557265 PABPC1P11940 636 aaKnown RBP12.83□□□□□ -0.36
SNX6-209ENST00000557265 ME1P48163 572 aa12.83□□□□□ -0.36
SNX6-209ENST00000557265 CLDN6P56747 220 aa12.83□□□□□ -0.36
SNX6-209ENST00000557265 SLC8A3P57103 927 aa12.83□□□□□ -0.36
SNX6-209ENST00000557265 RACK1P63244 317 aaKnown RBP12.83□□□□□ -0.36
SNX6-209ENST00000557265 PDE4CQ08493 712 aa12.83□□□□□ -0.36
SNX6-209ENST00000557265 TTC31Q49AM3 519 aaPredicted RBP12.83□□□□□ -0.36
SNX6-209ENST00000557265 ADGRF1Q5T601 910 aa12.83□□□□□ -0.36
SNX6-209ENST00000557265 MBLAC2Q68D91 279 aa12.83□□□□□ -0.36
SNX6-209ENST00000557265 ZNF776Q68DI1 518 aaPredicted RBP12.83□□□□□ -0.36
SNX6-209ENST00000557265 KIAA0895LQ68EN5 471 aa12.83□□□□□ -0.36
SNX6-209ENST00000557265 PM20D1Q6GTS8 502 aa12.83□□□□□ -0.36
SNX6-209ENST00000557265 INTS8Q75QN2 995 aaKnown RBP12.83□□□□□ -0.36
SNX6-209ENST00000557265 KIAA0907Q7Z7F0 614 aaPredicted RBP12.83□□□□□ -0.36
SNX6-209ENST00000557265 AHI1Q8N157 1196 aa12.83□□□□□ -0.36
SNX6-209ENST00000557265 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.83□□□□□ -0.36
SNX6-209ENST00000557265 ANKRD52Q8NB46 1076 aa12.83□□□□□ -0.36
SNX6-209ENST00000557265 SLC4A11Q8NBS3 891 aa12.83□□□□□ -0.36
SNX6-209ENST00000557265 CCDC150Q8NCX0 1101 aa12.83□□□□□ -0.36
SNX6-209ENST00000557265 GANCQ8TET4 914 aa12.83□□□□□ -0.36
SNX6-209ENST00000557265 SLC39A7Q92504 469 aa12.83□□□□□ -0.36
SNX6-209ENST00000557265 GOLGA1Q92805 767 aa12.83□□□□□ -0.36
SNX6-209ENST00000557265 COL26A1Q96A83 441 aa12.83□□□□□ -0.36
SNX6-209ENST00000557265 TMEM176AQ96HP8 235 aa12.83□□□□□ -0.36
SNX6-209ENST00000557265 ULBP1Q9BZM6 244 aa12.83□□□□□ -0.36
SNX6-209ENST00000557265 MTG2Q9H4K7 406 aa12.83□□□□□ -0.36
SNX6-209ENST00000557265 CISHQ9NSE2 258 aa12.83□□□□□ -0.36
SNX6-209ENST00000557265 SFMBT1Q9UHJ3 866 aa12.83□□□□□ -0.36
SNX6-209ENST00000557265 HBS1LQ9Y450 684 aaKnown RBP12.83□□□□□ -0.36
SNX6-209ENST00000557265 PTPRBP23467 1997 aa12.82□□□□□ -0.36
SNX6-209ENST00000557265 TULP2O00295 520 aa12.82□□□□□ -0.36
SNX6-209ENST00000557265 ENC1O14682 589 aa12.82□□□□□ -0.36
SNX6-209ENST00000557265 MAPK13O15264 365 aa12.82□□□□□ -0.36
SNX6-209ENST00000557265 LDOC1O95751 146 aaPredicted RBP12.82□□□□□ -0.36
SNX6-209ENST00000557265 KRT13P13646 458 aa12.82□□□□□ -0.36
SNX6-209ENST00000557265 NR2F2P24468 414 aa12.82□□□□□ -0.36
SNX6-209ENST00000557265 SGSHP51688 502 aa12.82□□□□□ -0.36
SNX6-209ENST00000557265 RAD23BP54727 409 aa12.82□□□□□ -0.36
SNX6-209ENST00000557265 ZNF445P59923 1031 aa12.82□□□□□ -0.36
SNX6-209ENST00000557265 SEMG2Q02383 582 aa12.82□□□□□ -0.36
SNX6-209ENST00000557265 DNAJC3Q13217 504 aa12.82□□□□□ -0.36
SNX6-209ENST00000557265 C6orf118Q5T5N4 469 aa12.82□□□□□ -0.36
SNX6-209ENST00000557265 ARHGAP17Q68EM7 881 aa12.82□□□□□ -0.36
SNX6-209ENST00000557265 BHLHA9Q7RTU4 235 aa12.82□□□□□ -0.36
SNX6-209ENST00000557265 RNF139Q8WU17 664 aa12.82□□□□□ -0.36
SNX6-209ENST00000557265 EDEM1Q92611 657 aa12.82□□□□□ -0.36
SNX6-209ENST00000557265 NXPE2Q96DL1 559 aa12.82□□□□□ -0.36
SNX6-209ENST00000557265 SLC6A18Q96N87 628 aa12.82□□□□□ -0.36
SNX6-209ENST00000557265 ELF4Q99607 663 aaPredicted RBP12.82□□□□□ -0.36
SNX6-209ENST00000557265 RSPH9Q9H1X1 276 aaPredicted RBP12.82□□□□□ -0.36
SNX6-209ENST00000557265 PABPC3Q9H361 631 aaKnown RBP12.82□□□□□ -0.36
SNX6-209ENST00000557265 OLA1Q9NTK5 396 aaKnown RBP12.82□□□□□ -0.36
SNX6-209ENST00000557265 FBXL12Q9NXK8 326 aa12.82□□□□□ -0.36
SNX6-209ENST00000557265 SUN2Q9UH99 717 aa12.82□□□□□ -0.36
SNX6-209ENST00000557265 STOML2Q9UJZ1 356 aa12.82□□□□□ -0.36
SNX6-209ENST00000557265 TRAF3IP3Q9Y228 551 aa12.82□□□□□ -0.36
SNX6-209ENST00000557265 NCKAP1Q9Y2A7 1128 aa12.82□□□□□ -0.36
SNX6-209ENST00000557265 PCDHGA1Q9Y5H4 931 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms