RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 SYCP2LQ5T4T6 812 aa9.13□□□□□ -0.95
VRK1-206ENST00000557222 ATL3Q6DD88 541 aa9.13□□□□□ -0.95
VRK1-206ENST00000557222 SHC4Q6S5L8 630 aa9.13□□□□□ -0.95
VRK1-206ENST00000557222 ARMCX6Q7L4S7 300 aa9.13□□□□□ -0.95
VRK1-206ENST00000557222 SYT9Q86SS6 491 aa9.13□□□□□ -0.95
VRK1-206ENST00000557222 TADA2BQ86TJ2 420 aa9.13□□□□□ -0.95
VRK1-206ENST00000557222 NELFCDQ8IXH7 590 aa9.13□□□□□ -0.95
VRK1-206ENST00000557222 FRMD1Q8N878 549 aa9.13□□□□□ -0.95
VRK1-206ENST00000557222 NAT16Q8N8M0 369 aa9.13□□□□□ -0.95
VRK1-206ENST00000557222 ZMIZ2Q8NF64 920 aa9.13□□□□□ -0.95
VRK1-206ENST00000557222 IPO4Q8TEX9 1081 aaKnown RBP9.13□□□□□ -0.95
VRK1-206ENST00000557222 CEP63Q96MT8 703 aa9.13□□□□□ -0.95
VRK1-206ENST00000557222 CDK5RAP1Q96SZ6 601 aaKnown RBP9.13□□□□□ -0.95
VRK1-206ENST00000557222 SLC30A3Q99726 388 aa9.13□□□□□ -0.95
VRK1-206ENST00000557222 HNRNPABQ99729 332 aaKnown RBP9.13□□□□□ -0.95
VRK1-206ENST00000557222 SMOQ99835 787 aa9.13□□□□□ -0.95
VRK1-206ENST00000557222 DNAI2Q9GZS0 605 aa9.13□□□□□ -0.95
VRK1-206ENST00000557222 BRD7Q9NPI1 651 aa9.13□□□□□ -0.95
VRK1-206ENST00000557222 DNAJC17Q9NVM6 304 aaKnown RBP9.13□□□□□ -0.95
VRK1-206ENST00000557222 GMIPQ9P107 970 aa9.13□□□□□ -0.95
VRK1-206ENST00000557222 CALCOCO1Q9P1Z2 691 aa9.13□□□□□ -0.95
VRK1-206ENST00000557222 FBXO10Q9UK96 956 aa9.13□□□□□ -0.95
VRK1-206ENST00000557222 SLC27A6Q9Y2P4 619 aa9.13□□□□□ -0.95
VRK1-206ENST00000557222 PCDHA5Q9Y5H7 936 aa9.13□□□□□ -0.95
VRK1-206ENST00000557222 CEP192Q8TEP8 1941 aa9.12□□□□□ -0.95
VRK1-206ENST00000557222 SRRM3A6NNA2 597 aaPredicted RBP9.12□□□□□ -0.95
VRK1-206ENST00000557222 LRRIQ3A6PVS8 624 aaPredicted RBP9.12□□□□□ -0.95
VRK1-206ENST00000557222 PDXKO00764 312 aa9.12□□□□□ -0.95
VRK1-206ENST00000557222 SCAMP3O14828 347 aaKnown RBP9.12□□□□□ -0.95
VRK1-206ENST00000557222 MAPK13O15264 365 aa9.12□□□□□ -0.95
VRK1-206ENST00000557222 POLR2DO15514 142 aaKnown RBP9.12□□□□□ -0.95
VRK1-206ENST00000557222 VNN1O95497 513 aa9.12□□□□□ -0.95
VRK1-206ENST00000557222 ASS1P00966 412 aaKnown RBP9.12□□□□□ -0.95
VRK1-206ENST00000557222 IGHA1P01876 353 aa9.12□□□□□ -0.95
VRK1-206ENST00000557222 CISD3P0C7P0 127 aa9.12□□□□□ -0.95
VRK1-206ENST00000557222 FAM200BP0CF97 657 aa9.12□□□□□ -0.95
VRK1-206ENST00000557222 TYRP14679 529 aa9.12□□□□□ -0.95
VRK1-206ENST00000557222 GNSP15586 552 aa9.12□□□□□ -0.95
VRK1-206ENST00000557222 SPINK2P20155 84 aa9.12□□□□□ -0.95
VRK1-206ENST00000557222 PLA2G4EQ3MJ16 856 aa9.12□□□□□ -0.95
VRK1-206ENST00000557222 WDR45BQ5MNZ6 344 aa9.12□□□□□ -0.95
VRK1-206ENST00000557222 ACOT1Q86TX2 421 aa9.12□□□□□ -0.95
VRK1-206ENST00000557222 CHPFQ8IZ52 775 aa9.12□□□□□ -0.95
VRK1-206ENST00000557222 MINDY1Q8N5J2 469 aa9.12□□□□□ -0.95
VRK1-206ENST00000557222 CADM4Q8NFZ8 388 aa9.12□□□□□ -0.95
VRK1-206ENST00000557222 PLEKHO2Q8TD55 490 aa9.12□□□□□ -0.95
VRK1-206ENST00000557222 SLC2A14Q8TDB8 520 aa9.12□□□□□ -0.95
VRK1-206ENST00000557222 ZCCHC14Q8WYQ9 949 aaKnown RBP9.12□□□□□ -0.95
VRK1-206ENST00000557222 DNASE2BQ8WZ79 361 aa9.12□□□□□ -0.95
VRK1-206ENST00000557222 FAXDC2Q96IV6 333 aa9.12□□□□□ -0.95
VRK1-206ENST00000557222 BBS2Q9BXC9 721 aa9.12□□□□□ -0.95
VRK1-206ENST00000557222 BACH2Q9BYV9 841 aa9.12□□□□□ -0.95
VRK1-206ENST00000557222 CYP3A43Q9HB55 503 aa9.12□□□□□ -0.95
VRK1-206ENST00000557222 SLC39A2Q9NP94 309 aa9.12□□□□□ -0.95
VRK1-206ENST00000557222 KRT82Q9NSB4 513 aa9.12□□□□□ -0.95
VRK1-206ENST00000557222 FAM13BQ9NYF5 915 aa9.12□□□□□ -0.95
VRK1-206ENST00000557222 CABIN1Q9Y6J0 2220 aa9.12□□□□□ -0.95
VRK1-206ENST00000557222 PRRT4C9JH25 899 aa9.11□□□□□ -0.95
VRK1-206ENST00000557222 NEDD8-MDP1E9PL57 170 aa9.11□□□□□ -0.95
VRK1-206ENST00000557222 HYAL3O43820 417 aaPredicted RBP9.11□□□□□ -0.95
VRK1-206ENST00000557222 NDUFS2O75306 463 aa9.11□□□□□ -0.95
VRK1-206ENST00000557222 GJB3O75712 270 aa9.11□□□□□ -0.95
VRK1-206ENST00000557222 TBX18O95935 607 aa9.11□□□□□ -0.95
VRK1-206ENST00000557222 TOP3BO95985 862 aaKnown RBP9.11□□□□□ -0.95
VRK1-206ENST00000557222 ITGB2P05107 769 aa9.11□□□□□ -0.95
VRK1-206ENST00000557222 MYL1P05976 194 aa9.11□□□□□ -0.95
VRK1-206ENST00000557222 SLFN14P0C7P3 912 aa9.11□□□□□ -0.95
VRK1-206ENST00000557222 CD59P13987 128 aa9.11□□□□□ -0.95
VRK1-206ENST00000557222 COL8A1P27658 744 aa9.11□□□□□ -0.95
VRK1-206ENST00000557222 OXTRP30559 389 aa9.11□□□□□ -0.95
VRK1-206ENST00000557222 CHKAP35790 457 aa9.11□□□□□ -0.95
VRK1-206ENST00000557222 NDST1P52848 882 aa9.11□□□□□ -0.95
VRK1-206ENST00000557222 MAP3K7CLP57077 242 aa9.11□□□□□ -0.95
VRK1-206ENST00000557222 COG7P83436 770 aa9.11□□□□□ -0.95
VRK1-206ENST00000557222 TYRO3Q06418 890 aa9.11□□□□□ -0.95
VRK1-206ENST00000557222 INCA1Q0VD86 236 aa9.11□□□□□ -0.95
VRK1-206ENST00000557222 ENPP2Q13822 863 aa9.11□□□□□ -0.95
VRK1-206ENST00000557222 RESP18Q5W5W9 173 aa9.11□□□□□ -0.95
VRK1-206ENST00000557222 EGFLAMQ63HQ2 1017 aa9.11□□□□□ -0.95
VRK1-206ENST00000557222 RAB44Q7Z6P3 723 aaPredicted RBP9.11□□□□□ -0.95
VRK1-206ENST00000557222 MIB1Q86YT6 1006 aa9.11□□□□□ -0.95
VRK1-206ENST00000557222 SLC41A1Q8IVJ1 513 aa9.11□□□□□ -0.95
VRK1-206ENST00000557222 TTC39CQ8N584 583 aa9.11□□□□□ -0.95
VRK1-206ENST00000557222 TRIML1Q8N9V2 468 aa9.11□□□□□ -0.95
VRK1-206ENST00000557222 WBP2Q969T9 261 aa9.11□□□□□ -0.95
VRK1-206ENST00000557222 MRGPRX1Q96LB2 322 aa9.11□□□□□ -0.95
VRK1-206ENST00000557222 GTPBP2Q9BX10 602 aaKnown RBP9.11□□□□□ -0.95
VRK1-206ENST00000557222 UBXN6Q9BZV1 441 aa9.11□□□□□ -0.95
VRK1-206ENST00000557222 DCLK3Q9C098 648 aa9.11□□□□□ -0.95
VRK1-206ENST00000557222 SDCBP2Q9H190 292 aa9.11□□□□□ -0.95
VRK1-206ENST00000557222 PCED1AQ9H1Q7 454 aa9.11□□□□□ -0.95
VRK1-206ENST00000557222 SUV39H2Q9H5I1 410 aa9.11□□□□□ -0.95
VRK1-206ENST00000557222 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.11□□□□□ -0.95
VRK1-206ENST00000557222 CLIC5Q9NZA1 410 aa9.11□□□□□ -0.95
VRK1-206ENST00000557222 PCDH15Q96QU1 1955 aa9.11□□□□□ -0.95
VRK1-206ENST00000557222 KNTC1P50748 2209 aa9.11□□□□□ -0.95
VRK1-206ENST00000557222 APC2O95996 2303 aa9.1□□□□□ -0.95
VRK1-206ENST00000557222 MYH10P35580 1976 aa9.1□□□□□ -0.95
VRK1-206ENST00000557222 SPAARA0A1B0GVQ0 90 aa9.1□□□□□ -0.95
VRK1-206ENST00000557222 HHLA1C9JL84 531 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms