RNA–Protein interactions for RNA: ENST00000556771.5

MTHFD1-214, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 813 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-214ENST00000556771 RNASE9P60153 205 aaKnown RBP10.96□□□□□ -0.65
MTHFD1-214ENST00000556771 KDSRQ06136 332 aa10.96□□□□□ -0.65
MTHFD1-214ENST00000556771 PTP4A2Q12974 167 aa10.96□□□□□ -0.65
MTHFD1-214ENST00000556771 GAS6Q14393 721 aa10.96□□□□□ -0.65
MTHFD1-214ENST00000556771 TDRD12Q587J7 1177 aaKnown RBP10.96□□□□□ -0.65
MTHFD1-214ENST00000556771 FAM133BQ5BKY9 247 aaKnown RBP10.96□□□□□ -0.65
MTHFD1-214ENST00000556771 ZC3H12AQ5D1E8 599 aaKnown RBP10.96□□□□□ -0.65
MTHFD1-214ENST00000556771 ACAD10Q6JQN1 1059 aa10.96□□□□□ -0.65
MTHFD1-214ENST00000556771 SYT13Q7L8C5 426 aa10.96□□□□□ -0.65
MTHFD1-214ENST00000556771 PLPP6Q8IY26 295 aa10.96□□□□□ -0.65
MTHFD1-214ENST00000556771 NAT16Q8N8M0 369 aa10.96□□□□□ -0.65
MTHFD1-214ENST00000556771 HJURPQ8NCD3 748 aaPredicted RBP10.96□□□□□ -0.65
MTHFD1-214ENST00000556771 C3orf20Q8ND61 904 aa10.96□□□□□ -0.65
MTHFD1-214ENST00000556771 SLC30A5Q8TAD4 765 aa10.96□□□□□ -0.65
MTHFD1-214ENST00000556771 ADAM32Q8TC27 787 aa10.96□□□□□ -0.65
MTHFD1-214ENST00000556771 USP33Q8TEY7 942 aa10.96□□□□□ -0.65
MTHFD1-214ENST00000556771 HAUS4Q9H6D7 363 aa10.96□□□□□ -0.65
MTHFD1-214ENST00000556771 METTL5Q9NRN9 209 aaKnown RBP10.96□□□□□ -0.65
MTHFD1-214ENST00000556771 STARD13Q9Y3M8 1113 aa10.96□□□□□ -0.65
MTHFD1-214ENST00000556771 KCNU1A8MYU2 1149 aa10.95□□□□□ -0.66
MTHFD1-214ENST00000556771 H0Y858 1186 aa10.95□□□□□ -0.66
MTHFD1-214ENST00000556771 NPC1O15118 1278 aa10.95□□□□□ -0.66
MTHFD1-214ENST00000556771 MOCS2O96007 188 aaPredicted RBP10.95□□□□□ -0.66
MTHFD1-214ENST00000556771 SERPING1P05155 500 aa10.95□□□□□ -0.66
MTHFD1-214ENST00000556771 CISD3P0C7P0 127 aa10.95□□□□□ -0.66
MTHFD1-214ENST00000556771 KRT3P12035 628 aa10.95□□□□□ -0.66
MTHFD1-214ENST00000556771 DESP17661 470 aa10.95□□□□□ -0.66
MTHFD1-214ENST00000556771 HOXD9P28356 352 aaPredicted RBP10.95□□□□□ -0.66
MTHFD1-214ENST00000556771 RDXP35241 583 aaKnown RBP10.95□□□□□ -0.66
MTHFD1-214ENST00000556771 FLT3P36888 993 aa10.95□□□□□ -0.66
MTHFD1-214ENST00000556771 PTPN9P43378 593 aa10.95□□□□□ -0.66
MTHFD1-214ENST00000556771 KIR2DL1P43626 348 aaPredicted RBP10.95□□□□□ -0.66
MTHFD1-214ENST00000556771 SULT1E1P49888 294 aa10.95□□□□□ -0.66
MTHFD1-214ENST00000556771 PITX1P78337 314 aaPredicted RBP10.95□□□□□ -0.66
MTHFD1-214ENST00000556771 NHLH1Q02575 133 aa10.95□□□□□ -0.66
MTHFD1-214ENST00000556771 CSTF1Q05048 431 aaKnown RBP10.95□□□□□ -0.66
MTHFD1-214ENST00000556771 DEUP1Q05D60 604 aa10.95□□□□□ -0.66
MTHFD1-214ENST00000556771 NME3Q13232 169 aa10.95□□□□□ -0.66
MTHFD1-214ENST00000556771 EIF4HQ15056 248 aaKnown RBP10.95□□□□□ -0.66
MTHFD1-214ENST00000556771 MS4A13Q5J8X5 152 aa10.95□□□□□ -0.66
MTHFD1-214ENST00000556771 C10orf76Q5T2E6 689 aa10.95□□□□□ -0.66
MTHFD1-214ENST00000556771 PIK3R6Q5UE93 754 aa10.95□□□□□ -0.66
MTHFD1-214ENST00000556771 TTC39BQ5VTQ0 682 aaPredicted RBP10.95□□□□□ -0.66
MTHFD1-214ENST00000556771 E4F1Q66K89 784 aaPredicted RBP10.95□□□□□ -0.66
MTHFD1-214ENST00000556771 RNF43Q68DV7 783 aa10.95□□□□□ -0.66
MTHFD1-214ENST00000556771 NADSYN1Q6IA69 706 aa10.95□□□□□ -0.66
MTHFD1-214ENST00000556771 ZNF571Q7Z3V5 609 aaPredicted RBP10.95□□□□□ -0.66
MTHFD1-214ENST00000556771 ANKS1BQ7Z6G8 1248 aa10.95□□□□□ -0.66
MTHFD1-214ENST00000556771 CHSY1Q86X52 802 aa10.95□□□□□ -0.66
MTHFD1-214ENST00000556771 CCDC117Q8IWD4 279 aaPredicted RBP10.95□□□□□ -0.66
MTHFD1-214ENST00000556771 DRC7Q8IY82 874 aa10.95□□□□□ -0.66
MTHFD1-214ENST00000556771 MCOLN2Q8IZK6 566 aa10.95□□□□□ -0.66
MTHFD1-214ENST00000556771 MAML2Q8IZL2 1156 aaPredicted RBP10.95□□□□□ -0.66
MTHFD1-214ENST00000556771 CAMKK1Q8N5S9 505 aa10.95□□□□□ -0.66
MTHFD1-214ENST00000556771 RPLP0P6Q8NHW5 317 aa10.95□□□□□ -0.66
MTHFD1-214ENST00000556771 WFIKKN2Q8TEU8 576 aa10.95□□□□□ -0.66
MTHFD1-214ENST00000556771 UCMAQ8WVF2 138 aa10.95□□□□□ -0.66
MTHFD1-214ENST00000556771 EZH1Q92800 747 aaPredicted RBP10.95□□□□□ -0.66
MTHFD1-214ENST00000556771 BHMTQ93088 406 aa10.95□□□□□ -0.66
MTHFD1-214ENST00000556771 TRIM11Q96F44 468 aa10.95□□□□□ -0.66
MTHFD1-214ENST00000556771 SELENOOQ9BVL4 669 aa10.95□□□□□ -0.66
MTHFD1-214ENST00000556771 SEMA4AQ9H3S1 761 aa10.95□□□□□ -0.66
MTHFD1-214ENST00000556771 WDCPQ9H6R7 721 aa10.95□□□□□ -0.66
MTHFD1-214ENST00000556771 METRNQ9UJH8 293 aa10.95□□□□□ -0.66
MTHFD1-214ENST00000556771 SLC8A2Q9UPR5 921 aa10.95□□□□□ -0.66
MTHFD1-214ENST00000556771 PCDHGA2Q9Y5H1 932 aa10.95□□□□□ -0.66
MTHFD1-214ENST00000556771 SYNJ2BP-COX16A0A087WUM0 186 aa10.94□□□□□ -0.66
MTHFD1-214ENST00000556771 CCDC163A0A0D9SF12 145 aa10.94□□□□□ -0.66
MTHFD1-214ENST00000556771 C2CD4BA6NLJ0 364 aa10.94□□□□□ -0.66
MTHFD1-214ENST00000556771 SIGLEC16A6NMB1 481 aa10.94□□□□□ -0.66
MTHFD1-214ENST00000556771 F5H5T6 163 aa10.94□□□□□ -0.66
MTHFD1-214ENST00000556771 TIMM44O43615 452 aa10.94□□□□□ -0.66
MTHFD1-214ENST00000556771 TSPAN3O60637 253 aa10.94□□□□□ -0.66
MTHFD1-214ENST00000556771 RTN2O75298 545 aa10.94□□□□□ -0.66
MTHFD1-214ENST00000556771 ENDOD1O94919 500 aa10.94□□□□□ -0.66
MTHFD1-214ENST00000556771 MYBL1P10243 752 aa10.94□□□□□ -0.66
MTHFD1-214ENST00000556771 PDGFRAP16234 1089 aa10.94□□□□□ -0.66
MTHFD1-214ENST00000556771 SDC4P31431 198 aa10.94□□□□□ -0.66
MTHFD1-214ENST00000556771 HNRNPH3P31942 346 aaKnown RBP10.94□□□□□ -0.66
MTHFD1-214ENST00000556771 NBL1P41271 181 aa10.94□□□□□ -0.66
MTHFD1-214ENST00000556771 CXCR3P49682 368 aa10.94□□□□□ -0.66
MTHFD1-214ENST00000556771 OXCT1P55809 520 aa10.94□□□□□ -0.66
MTHFD1-214ENST00000556771 SATB1Q01826 763 aa10.94□□□□□ -0.66
MTHFD1-214ENST00000556771 TSR1Q2NL82 804 aaKnown RBP10.94□□□□□ -0.66
MTHFD1-214ENST00000556771 C2CD6Q53TS8 623 aa10.94□□□□□ -0.66
MTHFD1-214ENST00000556771 EOGTQ5NDL2 527 aa10.94□□□□□ -0.66
MTHFD1-214ENST00000556771 RABGAP1LQ5R372 815 aa10.94□□□□□ -0.66
MTHFD1-214ENST00000556771 DNAJC24Q6P3W2 148 aa10.94□□□□□ -0.66
MTHFD1-214ENST00000556771 STRADAQ7RTN6 431 aa10.94□□□□□ -0.66
MTHFD1-214ENST00000556771 BNIPLQ7Z465 357 aa10.94□□□□□ -0.66
MTHFD1-214ENST00000556771 VSTM4Q8IW00 320 aa10.94□□□□□ -0.66
MTHFD1-214ENST00000556771 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.94□□□□□ -0.66
MTHFD1-214ENST00000556771 CPLX3Q8WVH0 158 aa10.94□□□□□ -0.66
MTHFD1-214ENST00000556771 NELL1Q92832 810 aa10.94□□□□□ -0.66
MTHFD1-214ENST00000556771 ATOH1Q92858 354 aaPredicted RBP10.94□□□□□ -0.66
MTHFD1-214ENST00000556771 TBCBQ99426 244 aa10.94□□□□□ -0.66
MTHFD1-214ENST00000556771 PIGVQ9NUD9 493 aa10.94□□□□□ -0.66
MTHFD1-214ENST00000556771 ZNHIT6Q9NWK9 470 aaKnown RBP10.94□□□□□ -0.66
MTHFD1-214ENST00000556771 ZSCAN32Q9NX65 697 aa10.94□□□□□ -0.66
MTHFD1-214ENST00000556771 ARHGEF38Q9NXL2 777 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms