RNA–Protein interactions for RNA: ENST00000556628.5

HNRNPC-226, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,156 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-226ENST00000556628 CNGB3Q9NQW8 809 aa8.04□□□□□ -1.12
HNRNPC-226ENST00000556628 PLK2Q9NYY3 685 aa8.04□□□□□ -1.12
HNRNPC-226ENST00000556628 AGO1Q9UL18 857 aaKnown RBP8.04□□□□□ -1.12
HNRNPC-226ENST00000556628 HBS1LQ9Y450 684 aaKnown RBP8.04□□□□□ -1.12
HNRNPC-226ENST00000556628 PCDHB9Q9Y5E1 797 aa8.04□□□□□ -1.12
HNRNPC-226ENST00000556628 EP300Q09472 2414 aaPredicted RBP8.04□□□□□ -1.12
HNRNPC-226ENST00000556628 GVINP1Q7Z2Y8 2422 aa8.04□□□□□ -1.12
HNRNPC-226ENST00000556628 CEP192Q8TEP8 1941 aa8.03□□□□□ -1.12
HNRNPC-226ENST00000556628 PLXND1Q9Y4D7 1925 aa8.03□□□□□ -1.12
HNRNPC-226ENST00000556628 LOC100996750A0A140TA64 210 aa8.03□□□□□ -1.12
HNRNPC-226ENST00000556628 PRRT4C9JH25 899 aa8.03□□□□□ -1.12
HNRNPC-226ENST00000556628 M0QYV0 167 aa8.03□□□□□ -1.12
HNRNPC-226ENST00000556628 TULP2O00295 520 aa8.03□□□□□ -1.12
HNRNPC-226ENST00000556628 NPC1O15118 1278 aa8.03□□□□□ -1.12
HNRNPC-226ENST00000556628 TRIM24O15164 1050 aa8.03□□□□□ -1.12
HNRNPC-226ENST00000556628 MED7O43513 233 aa8.03□□□□□ -1.12
HNRNPC-226ENST00000556628 ADAM23O75077 832 aa8.03□□□□□ -1.12
HNRNPC-226ENST00000556628 ZNF217O75362 1048 aa8.03□□□□□ -1.12
HNRNPC-226ENST00000556628 PENKP01210 267 aaPredicted RBP8.03□□□□□ -1.12
HNRNPC-226ENST00000556628 CISD3P0C7P0 127 aa8.03□□□□□ -1.12
HNRNPC-226ENST00000556628 BMP2P12643 396 aa8.03□□□□□ -1.12
HNRNPC-226ENST00000556628 HNRNPLP14866 589 aaKnown RBP eCLIP8.03□□□□□ -1.12
HNRNPC-226ENST00000556628 GABRG2P18507 467 aa8.03□□□□□ -1.12
HNRNPC-226ENST00000556628 BCKDHBP21953 392 aa8.03□□□□□ -1.12
HNRNPC-226ENST00000556628 BMP6P22004 513 aa8.03□□□□□ -1.12
HNRNPC-226ENST00000556628 MARSP56192 900 aaKnown RBP8.03□□□□□ -1.12
HNRNPC-226ENST00000556628 DAOAP59103 153 aa8.03□□□□□ -1.12
HNRNPC-226ENST00000556628 ZNF445P59923 1031 aa8.03□□□□□ -1.12
HNRNPC-226ENST00000556628 GCNT1Q02742 428 aa8.03□□□□□ -1.12
HNRNPC-226ENST00000556628 RPL6Q02878 288 aaKnown RBP8.03□□□□□ -1.12
HNRNPC-226ENST00000556628 STARD3Q14849 445 aa8.03□□□□□ -1.12
HNRNPC-226ENST00000556628 MPPE1Q53F39 396 aa8.03□□□□□ -1.12
HNRNPC-226ENST00000556628 SPDYCQ5MJ68 293 aa8.03□□□□□ -1.12
HNRNPC-226ENST00000556628 STPG1Q5TH74 334 aa8.03□□□□□ -1.12
HNRNPC-226ENST00000556628 DAB2IPQ5VWQ8 1189 aa8.03□□□□□ -1.12
HNRNPC-226ENST00000556628 FYB2Q5VWT5 728 aa8.03□□□□□ -1.12
HNRNPC-226ENST00000556628 BSPRYQ5W0U4 402 aa8.03□□□□□ -1.12
HNRNPC-226ENST00000556628 TOGARAM2Q6ZUX3 1019 aa8.03□□□□□ -1.12
HNRNPC-226ENST00000556628 RRAGAQ7L523 313 aa8.03□□□□□ -1.12
HNRNPC-226ENST00000556628 FMNL3Q8IVF7 1028 aa8.03□□□□□ -1.12
HNRNPC-226ENST00000556628 TRIM59Q8IWR1 403 aa8.03□□□□□ -1.12
HNRNPC-226ENST00000556628 SCML4Q8N228 414 aa8.03□□□□□ -1.12
HNRNPC-226ENST00000556628 CPXM2Q8N436 756 aa8.03□□□□□ -1.12
HNRNPC-226ENST00000556628 UBR7Q8N806 425 aa8.03□□□□□ -1.12
HNRNPC-226ENST00000556628 IPO4Q8TEX9 1081 aaKnown RBP8.03□□□□□ -1.12
HNRNPC-226ENST00000556628 IRGQQ8WZA9 623 aa8.03□□□□□ -1.12
HNRNPC-226ENST00000556628 EDEM1Q92611 657 aa8.03□□□□□ -1.12
HNRNPC-226ENST00000556628 PIGKQ92643 395 aa8.03□□□□□ -1.12
HNRNPC-226ENST00000556628 FAM81BQ96LP2 452 aa8.03□□□□□ -1.12
HNRNPC-226ENST00000556628 EDEM2Q9BV94 578 aa8.03□□□□□ -1.12
HNRNPC-226ENST00000556628 NUSAP1Q9BXS6 441 aaKnown RBP8.03□□□□□ -1.12
HNRNPC-226ENST00000556628 KRTAP4-6Q9BYQ5 205 aa8.03□□□□□ -1.12
HNRNPC-226ENST00000556628 SLC2A11Q9BYW1 496 aa8.03□□□□□ -1.12
HNRNPC-226ENST00000556628 CACNA2D2Q9NY47 1150 aa8.03□□□□□ -1.12
HNRNPC-226ENST00000556628 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.03□□□□□ -1.12
HNRNPC-226ENST00000556628 SLC27A6Q9Y2P4 619 aa8.03□□□□□ -1.12
HNRNPC-226ENST00000556628 ZNF292O60281 2723 aa8.02□□□□□ -1.12
HNRNPC-226ENST00000556628 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.02□□□□□ -1.13
HNRNPC-226ENST00000556628 TYW5A2RUC4 315 aaKnown RBP8.02□□□□□ -1.13
HNRNPC-226ENST00000556628 YJEFN3A6XGL0 299 aa8.02□□□□□ -1.13
HNRNPC-226ENST00000556628 E7ENQ6 273 aa8.02□□□□□ -1.13
HNRNPC-226ENST00000556628 SART1O43290 800 aaKnown RBP8.02□□□□□ -1.13
HNRNPC-226ENST00000556628 SYNCRIPO60506 623 aaKnown RBP8.02□□□□□ -1.13
HNRNPC-226ENST00000556628 TSPAN3O60637 253 aa8.02□□□□□ -1.13
HNRNPC-226ENST00000556628 NDUFS2O75306 463 aa8.02□□□□□ -1.13
HNRNPC-226ENST00000556628 FBXO21O94952 628 aa8.02□□□□□ -1.13
HNRNPC-226ENST00000556628 LATS1O95835 1130 aa8.02□□□□□ -1.13
HNRNPC-226ENST00000556628 LTFP02788 710 aa8.02□□□□□ -1.13
HNRNPC-226ENST00000556628 KLKB1P03952 638 aa8.02□□□□□ -1.13
HNRNPC-226ENST00000556628 KRT5P13647 590 aa8.02□□□□□ -1.13
HNRNPC-226ENST00000556628 BRD2P25440 801 aaKnown RBP8.02□□□□□ -1.13
HNRNPC-226ENST00000556628 ACADSBP45954 432 aa8.02□□□□□ -1.13
HNRNPC-226ENST00000556628 RGS7P49802 495 aa8.02□□□□□ -1.13
HNRNPC-226ENST00000556628 ZNF132P52740 706 aa8.02□□□□□ -1.13
HNRNPC-226ENST00000556628 MFAP3P55082 362 aa8.02□□□□□ -1.13
HNRNPC-226ENST00000556628 LMAN2Q12907 356 aa8.02□□□□□ -1.13
HNRNPC-226ENST00000556628 EIF4HQ15056 248 aaKnown RBP8.02□□□□□ -1.13
HNRNPC-226ENST00000556628 TRIP4Q15650 581 aaPredicted RBP8.02□□□□□ -1.13
HNRNPC-226ENST00000556628 CAMK4Q16566 473 aa8.02□□□□□ -1.13
HNRNPC-226ENST00000556628 MAP7D1Q3KQU3 841 aa8.02□□□□□ -1.13
HNRNPC-226ENST00000556628 LYSMD4Q5XG99 296 aa8.02□□□□□ -1.13
HNRNPC-226ENST00000556628 TCEAL6Q6IPX3 200 aa8.02□□□□□ -1.13
HNRNPC-226ENST00000556628 KIAA1324Q6UXG2 1013 aaKnown RBP8.02□□□□□ -1.13
HNRNPC-226ENST00000556628 ARMCX6Q7L4S7 300 aa8.02□□□□□ -1.13
HNRNPC-226ENST00000556628 ENOSF1Q7L5Y1 443 aa8.02□□□□□ -1.13
HNRNPC-226ENST00000556628 ANKS1BQ7Z6G8 1248 aa8.02□□□□□ -1.13
HNRNPC-226ENST00000556628 SYT12Q8IV01 421 aa8.02□□□□□ -1.13
HNRNPC-226ENST00000556628 ARHGEF19Q8IW93 802 aa8.02□□□□□ -1.13
HNRNPC-226ENST00000556628 CCDC117Q8IWD4 279 aaPredicted RBP8.02□□□□□ -1.13
HNRNPC-226ENST00000556628 UNC45BQ8IWX7 931 aa8.02□□□□□ -1.13
HNRNPC-226ENST00000556628 TMEFF1Q8IYR6 380 aa8.02□□□□□ -1.13
HNRNPC-226ENST00000556628 LMO3Q8TAP4 145 aa8.02□□□□□ -1.13
HNRNPC-226ENST00000556628 SLC35F5Q8WV83 523 aa8.02□□□□□ -1.13
HNRNPC-226ENST00000556628 NDRG1Q92597 394 aaKnown RBP8.02□□□□□ -1.13
HNRNPC-226ENST00000556628 KAT5Q92993 513 aa8.02□□□□□ -1.13
HNRNPC-226ENST00000556628 TCEAL3Q969E4 200 aa8.02□□□□□ -1.13
HNRNPC-226ENST00000556628 TMA16Q96EY4 203 aaKnown RBP8.02□□□□□ -1.13
HNRNPC-226ENST00000556628 HSFY1Q96LI6 401 aa8.02□□□□□ -1.13
HNRNPC-226ENST00000556628 ACOX2Q99424 681 aa8.02□□□□□ -1.13
HNRNPC-226ENST00000556628 GABRG3Q99928 467 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms