RNA–Protein interactions for RNA: ENST00000556339.5

ATXN3-240, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 525 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-240ENST00000556339 BEND2Q8NDZ0 799 aa4.34□□□□□ -1.71
ATXN3-240ENST00000556339 KIAA1524Q8TCG1 905 aa4.34□□□□□ -1.71
ATXN3-240ENST00000556339 POF1BQ8WVV4 589 aa4.34□□□□□ -1.71
ATXN3-240ENST00000556339 ZNF764Q96H86 408 aaPredicted RBP4.34□□□□□ -1.71
ATXN3-240ENST00000556339 ZNF396Q96N95 335 aaPredicted RBP4.34□□□□□ -1.71
ATXN3-240ENST00000556339 ADAM2Q99965 735 aa4.34□□□□□ -1.71
ATXN3-240ENST00000556339 SLC26A6Q9BXS9 759 aa4.34□□□□□ -1.71
ATXN3-240ENST00000556339 TOR3AQ9H497 397 aa4.34□□□□□ -1.71
ATXN3-240ENST00000556339 ATP6V0A4Q9HBG4 840 aa4.34□□□□□ -1.71
ATXN3-240ENST00000556339 TRIM39Q9HCM9 518 aa4.34□□□□□ -1.71
ATXN3-240ENST00000556339 TBC1D22BQ9NU19 505 aa4.34□□□□□ -1.71
ATXN3-240ENST00000556339 BARHL2Q9NY43 387 aa4.34□□□□□ -1.71
ATXN3-240ENST00000556339 CD207Q9UJ71 328 aa4.34□□□□□ -1.71
ATXN3-240ENST00000556339 PCDHA10Q9Y5I2 948 aa4.34□□□□□ -1.71
ATXN3-240ENST00000556339 SQORQ9Y6N5 450 aa4.34□□□□□ -1.71
ATXN3-240ENST00000556339 NFASCO94856 1347 aa4.34□□□□□ -1.71
ATXN3-240ENST00000556339 FRMPD4Q14CM0 1322 aa4.34□□□□□ -1.71
ATXN3-240ENST00000556339 ADGRA3Q8IWK6 1321 aa4.34□□□□□ -1.71
ATXN3-240ENST00000556339 NLRC5Q86WI3 1866 aa4.34□□□□□ -1.71
ATXN3-240ENST00000556339 MBLAC1A4D2B0 266 aaPredicted RBP4.33□□□□□ -1.72
ATXN3-240ENST00000556339 C5orf67F2Z3F1 127 aa4.33□□□□□ -1.72
ATXN3-240ENST00000556339 IPO5O00410 1097 aaKnown RBP4.33□□□□□ -1.72
ATXN3-240ENST00000556339 DVL2O14641 736 aa4.33□□□□□ -1.72
ATXN3-240ENST00000556339 PLD2O14939 933 aa4.33□□□□□ -1.72
ATXN3-240ENST00000556339 PER2O15055 1255 aa4.33□□□□□ -1.72
ATXN3-240ENST00000556339 HOXA3O43365 443 aaPredicted RBP4.33□□□□□ -1.72
ATXN3-240ENST00000556339 PRPF3O43395 683 aaKnown RBP4.33□□□□□ -1.72
ATXN3-240ENST00000556339 DCXO43602 365 aa4.33□□□□□ -1.72
ATXN3-240ENST00000556339 CHMP2AO43633 222 aa4.33□□□□□ -1.72
ATXN3-240ENST00000556339 PFKFB2O60825 505 aa4.33□□□□□ -1.72
ATXN3-240ENST00000556339 GAS7O60861 476 aa4.33□□□□□ -1.72
ATXN3-240ENST00000556339 PRPF6O94906 941 aaKnown RBP4.33□□□□□ -1.72
ATXN3-240ENST00000556339 VTNP04004 478 aa4.33□□□□□ -1.72
ATXN3-240ENST00000556339 SRGAP2BP0DMP2 458 aa4.33□□□□□ -1.72
ATXN3-240ENST00000556339 CPA1P15085 419 aa4.33□□□□□ -1.72
ATXN3-240ENST00000556339 FBLP22087 321 aaKnown RBP4.33□□□□□ -1.72
ATXN3-240ENST00000556339 CD38P28907 300 aa4.33□□□□□ -1.72
ATXN3-240ENST00000556339 HOXC8P31273 242 aa4.33□□□□□ -1.72
ATXN3-240ENST00000556339 SREBF1P36956 1147 aa4.33□□□□□ -1.72
ATXN3-240ENST00000556339 PLA2G5P39877 138 aa4.33□□□□□ -1.72
ATXN3-240ENST00000556339 MECP2P51608 486 aaKnown RBP4.33□□□□□ -1.72
ATXN3-240ENST00000556339 CRYBB1P53674 252 aaPredicted RBP4.33□□□□□ -1.72
ATXN3-240ENST00000556339 EVCP57679 992 aa4.33□□□□□ -1.72
ATXN3-240ENST00000556339 NLRP11P59045 1033 aaKnown RBP4.33□□□□□ -1.72
ATXN3-240ENST00000556339 CCT2P78371 535 aaKnown RBP4.33□□□□□ -1.72
ATXN3-240ENST00000556339 MGAT3Q09327 533 aa4.33□□□□□ -1.72
ATXN3-240ENST00000556339 PFKFB3Q16875 520 aaPredicted RBP4.33□□□□□ -1.72
ATXN3-240ENST00000556339 ADCK5Q3MIX3 580 aa4.33□□□□□ -1.72
ATXN3-240ENST00000556339 DNTTIP2Q5QJE6 756 aaKnown RBP4.33□□□□□ -1.72
ATXN3-240ENST00000556339 MARCH8Q5T0T0 291 aa4.33□□□□□ -1.72
ATXN3-240ENST00000556339 FAM102BQ5T8I3 360 aa4.33□□□□□ -1.72
ATXN3-240ENST00000556339 SYCE2Q6PIF2 218 aa4.33□□□□□ -1.72
ATXN3-240ENST00000556339 ABHD15Q6UXT9 468 aa4.33□□□□□ -1.72
ATXN3-240ENST00000556339 UBE2R2Q712K3 238 aaPredicted RBP4.33□□□□□ -1.72
ATXN3-240ENST00000556339 SLC24A5Q71RS6 500 aa4.33□□□□□ -1.72
ATXN3-240ENST00000556339 NIPA1Q7RTP0 329 aa4.33□□□□□ -1.72
ATXN3-240ENST00000556339 ADGRG3Q86Y34 549 aa4.33□□□□□ -1.72
ATXN3-240ENST00000556339 CCDC83Q8IWF9 413 aa4.33□□□□□ -1.72
ATXN3-240ENST00000556339 ADHFE1Q8IWW8 467 aa4.33□□□□□ -1.72
ATXN3-240ENST00000556339 KIAA0319LQ8IZA0 1049 aa4.33□□□□□ -1.72
ATXN3-240ENST00000556339 CCDC148Q8NFR7 591 aa4.33□□□□□ -1.72
ATXN3-240ENST00000556339 SPPL3Q8TCT6 385 aa4.33□□□□□ -1.72
ATXN3-240ENST00000556339 NEK9Q8TD19 979 aa4.33□□□□□ -1.72
ATXN3-240ENST00000556339 ATP8B4Q8TF62 1192 aa4.33□□□□□ -1.72
ATXN3-240ENST00000556339 P2RX5Q93086 422 aa4.33□□□□□ -1.72
ATXN3-240ENST00000556339 GTF3C6Q969F1 213 aa4.33□□□□□ -1.72
ATXN3-240ENST00000556339 ZNF274Q96GC6 653 aaPredicted RBP4.33□□□□□ -1.72
ATXN3-240ENST00000556339 MRFAP1L1Q96HT8 127 aa4.33□□□□□ -1.72
ATXN3-240ENST00000556339 ZNF668Q96K58 619 aaPredicted RBP4.33□□□□□ -1.72
ATXN3-240ENST00000556339 RPGRIP1Q96KN7 1286 aa4.33□□□□□ -1.72
ATXN3-240ENST00000556339 FAM167AQ96KS9 214 aa4.33□□□□□ -1.72
ATXN3-240ENST00000556339 C16orf92Q96LL3 132 aa4.33□□□□□ -1.72
ATXN3-240ENST00000556339 PCYT2Q99447 389 aa4.33□□□□□ -1.72
ATXN3-240ENST00000556339 CCDC94Q9BW85 323 aaPredicted RBP4.33□□□□□ -1.72
ATXN3-240ENST00000556339 APOL5Q9BWW9 433 aa4.33□□□□□ -1.72
ATXN3-240ENST00000556339 TEKT3Q9BXF9 490 aa4.33□□□□□ -1.72
ATXN3-240ENST00000556339 AGXT2Q9BYV1 514 aa4.33□□□□□ -1.72
ATXN3-240ENST00000556339 OSBPL6Q9BZF3 934 aa4.33□□□□□ -1.72
ATXN3-240ENST00000556339 NAT10Q9H0A0 1025 aaKnown RBP4.33□□□□□ -1.72
ATXN3-240ENST00000556339 TNMDQ9H2S6 317 aa4.33□□□□□ -1.72
ATXN3-240ENST00000556339 POFUT1Q9H488 388 aa4.33□□□□□ -1.72
ATXN3-240ENST00000556339 CLSTN2Q9H4D0 955 aa4.33□□□□□ -1.72
ATXN3-240ENST00000556339 C1orf112Q9NSG2 853 aa4.33□□□□□ -1.72
ATXN3-240ENST00000556339 TYW1Q9NV66 732 aaKnown RBP4.33□□□□□ -1.72
ATXN3-240ENST00000556339 ING3Q9NXR8 418 aa4.33□□□□□ -1.72
ATXN3-240ENST00000556339 TRPM5Q9NZQ8 1165 aa4.33□□□□□ -1.72
ATXN3-240ENST00000556339 GABBR1Q9UBS5 961 aa4.33□□□□□ -1.72
ATXN3-240ENST00000556339 RCOR1Q9UKL0 485 aa4.33□□□□□ -1.72
ATXN3-240ENST00000556339 TPCN1Q9ULQ1 816 aa4.33□□□□□ -1.72
ATXN3-240ENST00000556339 ST3GAL5Q9UNP4 418 aa4.33□□□□□ -1.72
ATXN3-240ENST00000556339 NOC2LQ9Y3T9 749 aaKnown RBP4.33□□□□□ -1.72
ATXN3-240ENST00000556339 MRPL42Q9Y6G3 142 aaKnown RBP4.33□□□□□ -1.72
ATXN3-240ENST00000556339 CDH23Q9H251 3354 aa4.33□□□□□ -1.72
ATXN3-240ENST00000556339 PIEZO1Q92508 2521 aa4.33□□□□□ -1.72
ATXN3-240ENST00000556339 ZDBF2Q9HCK1 2354 aa4.33□□□□□ -1.72
ATXN3-240ENST00000556339 MUC3AQ02505 3323 aa4.32□□□□□ -1.72
ATXN3-240ENST00000556339 IGSF9BQ9UPX0 1349 aa4.32□□□□□ -1.72
ATXN3-240ENST00000556339 GRID2IPA4D2P6 1211 aa4.32□□□□□ -1.72
ATXN3-240ENST00000556339 VPS37CA5D8V6 355 aaPredicted RBP4.32□□□□□ -1.72
ATXN3-240ENST00000556339 FAM86B1E9PN63 330 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms