RNA–Protein interactions for RNA: ENST00000556296.1

APEX1-213, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 4

Gene APEX1, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-213ENST00000556296 SKILP12757 684 aa13.3□□□□□ -0.28
APEX1-213ENST00000556296 HOXB2P14652 356 aa13.3□□□□□ -0.28
APEX1-213ENST00000556296 TNFAIP3P21580 790 aa13.3□□□□□ -0.28
APEX1-213ENST00000556296 NTSR1P30989 418 aa13.3□□□□□ -0.28
APEX1-213ENST00000556296 ATP5C1P36542 298 aaKnown RBP13.3□□□□□ -0.28
APEX1-213ENST00000556296 MAPK8P45983 427 aa13.3□□□□□ -0.28
APEX1-213ENST00000556296 CDK17Q00537 523 aa13.3□□□□□ -0.28
APEX1-213ENST00000556296 FMO1Q01740 532 aa13.3□□□□□ -0.28
APEX1-213ENST00000556296 RPL6Q02878 288 aaKnown RBP13.3□□□□□ -0.28
APEX1-213ENST00000556296 PDE4CQ08493 712 aa13.3□□□□□ -0.28
APEX1-213ENST00000556296 PKDCCQ504Y2 493 aa13.3□□□□□ -0.28
APEX1-213ENST00000556296 HGSNATQ68CP4 663 aa13.3□□□□□ -0.28
APEX1-213ENST00000556296 DENND1BQ6P3S1 775 aa13.3□□□□□ -0.28
APEX1-213ENST00000556296 ARMCX6Q7L4S7 300 aa13.3□□□□□ -0.28
APEX1-213ENST00000556296 PASD1Q8IV76 773 aa13.3□□□□□ -0.28
APEX1-213ENST00000556296 NAT16Q8N8M0 369 aa13.3□□□□□ -0.28
APEX1-213ENST00000556296 ZMIZ2Q8NF64 920 aa13.3□□□□□ -0.28
APEX1-213ENST00000556296 ZFRQ96KR1 1074 aaKnown RBP13.3□□□□□ -0.28
APEX1-213ENST00000556296 SMOQ99835 787 aa13.3□□□□□ -0.28
APEX1-213ENST00000556296 SEPT11Q9NVA2 429 aaKnown RBP13.3□□□□□ -0.28
APEX1-213ENST00000556296 GMIPQ9P107 970 aa13.3□□□□□ -0.28
APEX1-213ENST00000556296 SLC6A14Q9UN76 642 aa13.3□□□□□ -0.28
APEX1-213ENST00000556296 STARD13Q9Y3M8 1113 aa13.3□□□□□ -0.28
APEX1-213ENST00000556296 SSU72P8A0A1W2PR75 194 aa13.29□□□□□ -0.28
APEX1-213ENST00000556296 UPK3BL1B0FP48 263 aa13.29□□□□□ -0.28
APEX1-213ENST00000556296 PATE3B3GLJ2 98 aa13.29□□□□□ -0.28
APEX1-213ENST00000556296 UPK3BL2E5RIL1 263 aa13.29□□□□□ -0.28
APEX1-213ENST00000556296 H0Y626 953 aa13.29□□□□□ -0.28
APEX1-213ENST00000556296 GIPC1O14908 333 aa13.29□□□□□ -0.28
APEX1-213ENST00000556296 TLR5O60602 858 aa13.29□□□□□ -0.28
APEX1-213ENST00000556296 OPHN1O60890 802 aa13.29□□□□□ -0.28
APEX1-213ENST00000556296 NDUFS2O75306 463 aa13.29□□□□□ -0.28
APEX1-213ENST00000556296 BEST1O76090 585 aa13.29□□□□□ -0.28
APEX1-213ENST00000556296 TRIM16O95361 564 aa13.29□□□□□ -0.28
APEX1-213ENST00000556296 CHRM1P11229 460 aaPredicted RBP13.29□□□□□ -0.28
APEX1-213ENST00000556296 GNSP15586 552 aa13.29□□□□□ -0.28
APEX1-213ENST00000556296 CHRNB2P17787 502 aa13.29□□□□□ -0.28
APEX1-213ENST00000556296 ENGP17813 658 aa13.29□□□□□ -0.28
APEX1-213ENST00000556296 CDH5P33151 784 aaPredicted RBP13.29□□□□□ -0.28
APEX1-213ENST00000556296 GPD2P43304 727 aa13.29□□□□□ -0.28
APEX1-213ENST00000556296 PLA2G4AP47712 749 aa13.29□□□□□ -0.28
APEX1-213ENST00000556296 SNX16P57768 344 aa13.29□□□□□ -0.28
APEX1-213ENST00000556296 MAP7D1Q3KQU3 841 aa13.29□□□□□ -0.28
APEX1-213ENST00000556296 SYCP2LQ5T4T6 812 aa13.29□□□□□ -0.28
APEX1-213ENST00000556296 EMC10Q5UCC4 262 aa13.29□□□□□ -0.28
APEX1-213ENST00000556296 PPP1R2P3Q6NXS1 205 aa13.29□□□□□ -0.28
APEX1-213ENST00000556296 WDR59Q6PJI9 974 aa13.29□□□□□ -0.28
APEX1-213ENST00000556296 ZNF571Q7Z3V5 609 aaPredicted RBP13.29□□□□□ -0.28
APEX1-213ENST00000556296 PIGZQ86VD9 579 aa13.29□□□□□ -0.28
APEX1-213ENST00000556296 C12orf40Q86WS4 652 aa13.29□□□□□ -0.28
APEX1-213ENST00000556296 BBS7Q8IWZ6 715 aa13.29□□□□□ -0.28
APEX1-213ENST00000556296 ETFBKMTQ8IXQ9 262 aa13.29□□□□□ -0.28
APEX1-213ENST00000556296 CHPFQ8IZ52 775 aa13.29□□□□□ -0.28
APEX1-213ENST00000556296 TERB1Q8NA31 727 aa13.29□□□□□ -0.28
APEX1-213ENST00000556296 MSANTD4Q8NCY6 345 aa13.29□□□□□ -0.28
APEX1-213ENST00000556296 SCAMP5Q8TAC9 235 aa13.29□□□□□ -0.28
APEX1-213ENST00000556296 STK32AQ8WU08 396 aa13.29□□□□□ -0.28
APEX1-213ENST00000556296 SLC35F5Q8WV83 523 aa13.29□□□□□ -0.28
APEX1-213ENST00000556296 CDK5RAP1Q96SZ6 601 aaKnown RBP13.29□□□□□ -0.28
APEX1-213ENST00000556296 SYT11Q9BT88 431 aa13.29□□□□□ -0.28
APEX1-213ENST00000556296 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.29□□□□□ -0.28
APEX1-213ENST00000556296 ADAM33Q9BZ11 813 aa13.29□□□□□ -0.28
APEX1-213ENST00000556296 DEF6Q9H4E7 631 aa13.29□□□□□ -0.28
APEX1-213ENST00000556296 DNAJC17Q9NVM6 304 aaKnown RBP13.29□□□□□ -0.28
APEX1-213ENST00000556296 ARHGAP20Q9P2F6 1191 aa13.29□□□□□ -0.28
APEX1-213ENST00000556296 SUSD2Q9UGT4 822 aa13.29□□□□□ -0.28
APEX1-213ENST00000556296 PILRBQ9UKJ0 227 aa13.29□□□□□ -0.28
APEX1-213ENST00000556296 THADAQ6YHU6 1953 aa13.29□□□□□ -0.28
APEX1-213ENST00000556296 ADAM23O75077 832 aa13.28□□□□□ -0.28
APEX1-213ENST00000556296 CYP1A1P04798 512 aaPredicted RBP13.28□□□□□ -0.28
APEX1-213ENST00000556296 IRF1P10914 325 aa13.28□□□□□ -0.28
APEX1-213ENST00000556296 PTGER3P43115 390 aa13.28□□□□□ -0.28
APEX1-213ENST00000556296 PSEN1P49768 467 aa13.28□□□□□ -0.28
APEX1-213ENST00000556296 PDCLQ13371 301 aa13.28□□□□□ -0.28
APEX1-213ENST00000556296 MAPK8IP2Q13387 824 aaPredicted RBP13.28□□□□□ -0.28
APEX1-213ENST00000556296 HTR3DQ70Z44 454 aa13.28□□□□□ -0.28
APEX1-213ENST00000556296 CCDC186Q7Z3E2 898 aa13.28□□□□□ -0.28
APEX1-213ENST00000556296 TMEM25Q86YD3 366 aa13.28□□□□□ -0.28
APEX1-213ENST00000556296 KDF1Q8NAX2 398 aaPredicted RBP13.28□□□□□ -0.28
APEX1-213ENST00000556296 C1orf131Q8NDD1 294 aaKnown RBP13.28□□□□□ -0.28
APEX1-213ENST00000556296 DEFB124Q8NES8 71 aa13.28□□□□□ -0.28
APEX1-213ENST00000556296 IPO4Q8TEX9 1081 aaKnown RBP13.28□□□□□ -0.28
APEX1-213ENST00000556296 KCTD13Q8WZ19 329 aa13.28□□□□□ -0.28
APEX1-213ENST00000556296 FOXJ1Q92949 421 aa13.28□□□□□ -0.28
APEX1-213ENST00000556296 PDLIM2Q96JY6 352 aa13.28□□□□□ -0.28
APEX1-213ENST00000556296 HSFY1Q96LI6 401 aa13.28□□□□□ -0.28
APEX1-213ENST00000556296 CCDC42Q96M95 316 aa13.28□□□□□ -0.28
APEX1-213ENST00000556296 GTPBP2Q9BX10 602 aaKnown RBP13.28□□□□□ -0.28
APEX1-213ENST00000556296 BBS2Q9BXC9 721 aa13.28□□□□□ -0.28
APEX1-213ENST00000556296 MIS12Q9H081 205 aa13.28□□□□□ -0.28
APEX1-213ENST00000556296 CCSER2Q9H7U1 834 aa13.28□□□□□ -0.28
APEX1-213ENST00000556296 LRRC4Q9HBW1 653 aa13.28□□□□□ -0.28
APEX1-213ENST00000556296 CYLDQ9NQC7 956 aa13.28□□□□□ -0.28
APEX1-213ENST00000556296 MBD1Q9UIS9 605 aaPredicted RBP13.28□□□□□ -0.28
APEX1-213ENST00000556296 ZNF510Q9Y2H8 683 aa13.28□□□□□ -0.28
APEX1-213ENST00000556296 PLXND1Q9Y4D7 1925 aa13.27□□□□□ -0.28
APEX1-213ENST00000556296 ANTXRLA6NF34 631 aa13.27□□□□□ -0.29
APEX1-213ENST00000556296 C1QTNF9BB2RNN3 333 aa13.27□□□□□ -0.29
APEX1-213ENST00000556296 NEDD8-MDP1E9PL57 170 aa13.27□□□□□ -0.29
APEX1-213ENST00000556296 GFRA2O00451 464 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms