RNA–Protein interactions for RNA: ENST00000556256.1

SCFD1-218, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-218ENST00000556256 SPATA31A7Q8IWB4 1347 aa3.86□□□□□ -1.79
SCFD1-218ENST00000556256 A0A1B0GVT2 93 aa3.85□□□□□ -1.79
SCFD1-218ENST00000556256 E2F8A0AVK6 867 aa3.85□□□□□ -1.79
SCFD1-218ENST00000556256 DENND3A2RUS2 1198 aa3.85□□□□□ -1.79
SCFD1-218ENST00000556256 TTC34A8MYJ7 566 aa3.85□□□□□ -1.79
SCFD1-218ENST00000556256 INAFM1C9JVW0 142 aa3.85□□□□□ -1.79
SCFD1-218ENST00000556256 MDM4O15151 490 aa3.85□□□□□ -1.79
SCFD1-218ENST00000556256 WNT1P04628 370 aa3.85□□□□□ -1.79
SCFD1-218ENST00000556256 YY1P25490 414 aa3.85□□□□□ -1.79
SCFD1-218ENST00000556256 PLAG1Q6DJT9 500 aa3.85□□□□□ -1.79
SCFD1-218ENST00000556256 ISM2Q6H9L7 571 aa3.85□□□□□ -1.79
SCFD1-218ENST00000556256 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.85□□□□□ -1.79
SCFD1-218ENST00000556256 C16orf82Q7Z2V1 217 aa3.85□□□□□ -1.79
SCFD1-218ENST00000556256 ZBTB46Q86UZ6 589 aa3.85□□□□□ -1.79
SCFD1-218ENST00000556256 RHPN2Q8IUC4 686 aa3.85□□□□□ -1.79
SCFD1-218ENST00000556256 SMCR8Q8TEV9 937 aaPredicted RBP3.85□□□□□ -1.79
SCFD1-218ENST00000556256 RHOBTB2Q9BYZ6 727 aa3.85□□□□□ -1.79
SCFD1-218ENST00000556256 MAGED2Q9UNF1 606 aaPredicted RBP3.85□□□□□ -1.79
SCFD1-218ENST00000556256 LAMP3Q9UQV4 416 aa3.85□□□□□ -1.79
SCFD1-218ENST00000556256 PCDHB2Q9Y5E7 798 aa3.85□□□□□ -1.79
SCFD1-218ENST00000556256 CKAP5Q14008 2032 aa3.84□□□□□ -1.79
SCFD1-218ENST00000556256 BECN2A8MW95 431 aa3.84□□□□□ -1.79
SCFD1-218ENST00000556256 TSPAN6O43657 245 aa3.84□□□□□ -1.79
SCFD1-218ENST00000556256 RFPL1O75677 317 aa3.84□□□□□ -1.79
SCFD1-218ENST00000556256 WDR47O94967 919 aa3.84□□□□□ -1.79
SCFD1-218ENST00000556256 ENO1P06733 434 aaKnown RBP3.84□□□□□ -1.79
SCFD1-218ENST00000556256 BTF3P20290 206 aaKnown RBP3.84□□□□□ -1.79
SCFD1-218ENST00000556256 NDUFS1P28331 727 aa3.84□□□□□ -1.79
SCFD1-218ENST00000556256 POU5F1BQ06416 359 aa3.84□□□□□ -1.79
SCFD1-218ENST00000556256 COASYQ13057 564 aa3.84□□□□□ -1.79
SCFD1-218ENST00000556256 SF3B4Q15427 424 aaKnown RBP eCLIP3.84□□□□□ -1.79
SCFD1-218ENST00000556256 ZNF718Q3SXZ3 478 aa3.84□□□□□ -1.79
SCFD1-218ENST00000556256 HMBOX1Q6NT76 420 aa3.84□□□□□ -1.79
SCFD1-218ENST00000556256 MZT2AQ6P582 158 aa3.84□□□□□ -1.79
SCFD1-218ENST00000556256 PARM1Q6UWI2 310 aa3.84□□□□□ -1.79
SCFD1-218ENST00000556256 DDIASQ8IXT1 998 aa3.84□□□□□ -1.79
SCFD1-218ENST00000556256 NMD3Q96D46 503 aaKnown RBP3.84□□□□□ -1.79
SCFD1-218ENST00000556256 ZNF845Q96IR2 970 aaPredicted RBP3.84□□□□□ -1.79
SCFD1-218ENST00000556256 ACO2Q99798 780 aaKnown RBP3.84□□□□□ -1.79
SCFD1-218ENST00000556256 PLAC1Q9HBJ0 212 aa3.84□□□□□ -1.79
SCFD1-218ENST00000556256 CHPF2Q9P2E5 772 aa3.84□□□□□ -1.79
SCFD1-218ENST00000556256 MID2Q9UJV3 735 aa3.84□□□□□ -1.79
SCFD1-218ENST00000556256 DPPA5A6NC42 116 aa3.83□□□□□ -1.8
SCFD1-218ENST00000556256 SRRM3A6NNA2 597 aaPredicted RBP3.83□□□□□ -1.8
SCFD1-218ENST00000556256 MARCH6O60337 910 aa3.83□□□□□ -1.8
SCFD1-218ENST00000556256 MAP4K4O95819 1239 aaPredicted RBP3.83□□□□□ -1.8
SCFD1-218ENST00000556256 SCGB1D2O95969 90 aa3.83□□□□□ -1.8
SCFD1-218ENST00000556256 SLC3A2P08195 630 aaKnown RBP3.83□□□□□ -1.8
SCFD1-218ENST00000556256 AKR1A1P14550 325 aa3.83□□□□□ -1.8
SCFD1-218ENST00000556256 CIITAP33076 1130 aa3.83□□□□□ -1.8
SCFD1-218ENST00000556256 KIF5AQ12840 1032 aa3.83□□□□□ -1.8
SCFD1-218ENST00000556256 GPS2Q13227 327 aa3.83□□□□□ -1.8
SCFD1-218ENST00000556256 KCNJ12Q14500 433 aa3.83□□□□□ -1.8
SCFD1-218ENST00000556256 ACOX1Q15067 660 aa3.83□□□□□ -1.8
SCFD1-218ENST00000556256 C3orf38Q5JPI3 329 aa3.83□□□□□ -1.8
SCFD1-218ENST00000556256 C9orf57Q5W0N0 161 aa3.83□□□□□ -1.8
SCFD1-218ENST00000556256 DHRS13Q6UX07 377 aa3.83□□□□□ -1.8
SCFD1-218ENST00000556256 KYAT3Q6YP21 454 aaKnown RBP3.83□□□□□ -1.8
SCFD1-218ENST00000556256 Q6ZTK2 550 aa3.83□□□□□ -1.8
SCFD1-218ENST00000556256 GPSM1Q86YR5 675 aa3.83□□□□□ -1.8
SCFD1-218ENST00000556256 WBP2Q969T9 261 aa3.83□□□□□ -1.8
SCFD1-218ENST00000556256 INPP4AQ96PE3 977 aaPredicted RBP3.83□□□□□ -1.8
SCFD1-218ENST00000556256 SELENOOQ9BVL4 669 aa3.83□□□□□ -1.8
SCFD1-218ENST00000556256 ZCWPW1Q9H0M4 648 aa3.83□□□□□ -1.8
SCFD1-218ENST00000556256 CHST8Q9H2A9 424 aa3.83□□□□□ -1.8
SCFD1-218ENST00000556256 MAP6D1Q9H9H5 199 aa3.83□□□□□ -1.8
SCFD1-218ENST00000556256 SPAG4Q9NPE6 437 aa3.83□□□□□ -1.8
SCFD1-218ENST00000556256 AASDHPPTQ9NRN7 309 aa3.83□□□□□ -1.8
SCFD1-218ENST00000556256 ZIM2Q9NZV7 527 aa3.83□□□□□ -1.8
SCFD1-218ENST00000556256 HPSEQ9Y251 543 aa3.83□□□□□ -1.8
SCFD1-218ENST00000556256 EMSYQ7Z589 1322 aa3.83□□□□□ -1.8
SCFD1-218ENST00000556256 OBSCNQ5VST9 7968 aa3.82□□□□□ -1.8
SCFD1-218ENST00000556256 RHODO00212 210 aa3.82□□□□□ -1.8
SCFD1-218ENST00000556256 RGS14O43566 566 aa3.82□□□□□ -1.8
SCFD1-218ENST00000556256 ZBTB11O95625 1053 aaPredicted RBP3.82□□□□□ -1.8
SCFD1-218ENST00000556256 TXNP10599 105 aaKnown RBP3.82□□□□□ -1.8
SCFD1-218ENST00000556256 IL1R1P14778 569 aa3.82□□□□□ -1.8
SCFD1-218ENST00000556256 PBX1P40424 430 aa3.82□□□□□ -1.8
SCFD1-218ENST00000556256 CLCN5P51795 746 aa3.82□□□□□ -1.8
SCFD1-218ENST00000556256 DGKQP52824 942 aa3.82□□□□□ -1.8
SCFD1-218ENST00000556256 ABATP80404 500 aa3.82□□□□□ -1.8
SCFD1-218ENST00000556256 EEF1A2Q05639 463 aaKnown RBP3.82□□□□□ -1.8
SCFD1-218ENST00000556256 PPP2R5AQ15172 486 aa3.82□□□□□ -1.8
SCFD1-218ENST00000556256 EEF1AKMT2Q5JPI9 291 aaKnown RBP3.82□□□□□ -1.8
SCFD1-218ENST00000556256 Q5PR19 223 aa3.82□□□□□ -1.8
SCFD1-218ENST00000556256 NXNQ6DKJ4 435 aa3.82□□□□□ -1.8
SCFD1-218ENST00000556256 FMNL3Q8IVF7 1028 aa3.82□□□□□ -1.8
SCFD1-218ENST00000556256 MUC20Q8N307 709 aaPredicted RBP3.82□□□□□ -1.8
SCFD1-218ENST00000556256 MBD3L2Q8NHZ7 208 aaPredicted RBP3.82□□□□□ -1.8
SCFD1-218ENST00000556256 SUN3Q8TAQ9 357 aa3.82□□□□□ -1.8
SCFD1-218ENST00000556256 ERVK-5Q9HDB9 667 aa3.82□□□□□ -1.8
SCFD1-218ENST00000556256 RGS17Q9UGC6 210 aaPredicted RBP3.82□□□□□ -1.8
SCFD1-218ENST00000556256 SPRY3O43610 288 aa3.81□□□□□ -1.8
SCFD1-218ENST00000556256 SGPL1O95470 568 aa3.81□□□□□ -1.8
SCFD1-218ENST00000556256 CYP1A2P05177 515 aa3.81□□□□□ -1.8
SCFD1-218ENST00000556256 ZKSCAN1P17029 563 aaPredicted RBP3.81□□□□□ -1.8
SCFD1-218ENST00000556256 HOXD3P31249 432 aaPredicted RBP3.81□□□□□ -1.8
SCFD1-218ENST00000556256 CXCR3P49682 368 aa3.81□□□□□ -1.8
SCFD1-218ENST00000556256 AGTR2P50052 363 aa3.81□□□□□ -1.8
SCFD1-218ENST00000556256 DLX5P56178 289 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms