RNA–Protein interactions for RNA: ENST00000556203.1

ACTN1-217, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-217ENST00000556203 MYEOVQ96EZ4 313 aa15.76■□□□□ 0.11
ACTN1-217ENST00000556203 BTN2A3PQ96KV6 586 aa15.76■□□□□ 0.11
ACTN1-217ENST00000556203 PRICKLE1Q96MT3 831 aaPredicted RBP15.76■□□□□ 0.11
ACTN1-217ENST00000556203 NPY6RQ99463 290 aa15.76■□□□□ 0.11
ACTN1-217ENST00000556203 SLC2A11Q9BYW1 496 aa15.76■□□□□ 0.11
ACTN1-217ENST00000556203 IRX2Q9BZI1 471 aaPredicted RBP15.76■□□□□ 0.11
ACTN1-217ENST00000556203 TTYH3Q9C0H2 523 aa15.76■□□□□ 0.11
ACTN1-217ENST00000556203 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.76■□□□□ 0.117e-7■■■■□ 25.5
ACTN1-217ENST00000556203 RRN3Q9NYV6 651 aa15.76■□□□□ 0.11
ACTN1-217ENST00000556203 IFNKQ9P0W0 207 aa15.76■□□□□ 0.11
ACTN1-217ENST00000556203 CALCOCO1Q9P1Z2 691 aa15.76■□□□□ 0.11
ACTN1-217ENST00000556203 SLC12A6Q9UHW9 1150 aa15.76■□□□□ 0.11
ACTN1-217ENST00000556203 TYW5A2RUC4 315 aaKnown RBP15.75■□□□□ 0.11
ACTN1-217ENST00000556203 PRR23AA6NEV1 266 aa15.75■□□□□ 0.11
ACTN1-217ENST00000556203 KCNU1A8MYU2 1149 aa15.75■□□□□ 0.11
ACTN1-217ENST00000556203 GFRA3O60609 400 aa15.75■□□□□ 0.11
ACTN1-217ENST00000556203 ADAM23O75077 832 aa15.75■□□□□ 0.11
ACTN1-217ENST00000556203 TFE3P19532 575 aaPredicted RBP15.75■□□□□ 0.11
ACTN1-217ENST00000556203 FLT3P36888 993 aa15.75■□□□□ 0.11
ACTN1-217ENST00000556203 PBX1P40424 430 aa15.75■□□□□ 0.11
ACTN1-217ENST00000556203 RPS24P62847 133 aaKnown RBP15.75■□□□□ 0.11
ACTN1-217ENST00000556203 FIGNQ5HY92 759 aa15.75■□□□□ 0.11
ACTN1-217ENST00000556203 MS4A13Q5J8X5 152 aa15.75■□□□□ 0.11
ACTN1-217ENST00000556203 MPP7Q5T2T1 576 aa15.75■□□□□ 0.11
ACTN1-217ENST00000556203 E4F1Q66K89 784 aaPredicted RBP15.75■□□□□ 0.11
ACTN1-217ENST00000556203 RAP1GAP2Q684P5 730 aa15.75■□□□□ 0.11
ACTN1-217ENST00000556203 TRNP1Q6NT89 227 aa15.75■□□□□ 0.11
ACTN1-217ENST00000556203 TRMT11Q7Z4G4 463 aaKnown RBP15.75■□□□□ 0.11
ACTN1-217ENST00000556203 WDR5BQ86VZ2 330 aa15.75■□□□□ 0.11
ACTN1-217ENST00000556203 CHSY1Q86X52 802 aa15.75■□□□□ 0.11
ACTN1-217ENST00000556203 PHF13Q86YI8 300 aaPredicted RBP15.75■□□□□ 0.11
ACTN1-217ENST00000556203 ATP6V0D2Q8N8Y2 350 aa15.75■□□□□ 0.11
ACTN1-217ENST00000556203 HJURPQ8NCD3 748 aaPredicted RBP15.75■□□□□ 0.11
ACTN1-217ENST00000556203 NUP58Q9BVL2 599 aa15.75■□□□□ 0.11
ACTN1-217ENST00000556203 ADAM33Q9BZ11 813 aa15.75■□□□□ 0.11
ACTN1-217ENST00000556203 EDEM3Q9BZQ6 932 aa15.75■□□□□ 0.11
ACTN1-217ENST00000556203 METTL5Q9NRN9 209 aaKnown RBP15.75■□□□□ 0.11
ACTN1-217ENST00000556203 ADAM22Q9P0K1 906 aa15.75■□□□□ 0.11
ACTN1-217ENST00000556203 STIM2Q9P246 746 aa15.75■□□□□ 0.11
ACTN1-217ENST00000556203 TMEM59LQ9UK28 342 aa15.75■□□□□ 0.11
ACTN1-217ENST00000556203 HRO43593 1189 aa15.74■□□□□ 0.11
ACTN1-217ENST00000556203 LMNAP02545 664 aaKnown RBP15.74■□□□□ 0.11
ACTN1-217ENST00000556203 HNRNPLP14866 589 aaKnown RBP eCLIP15.74■□□□□ 0.11
ACTN1-217ENST00000556203 TACR2P21452 398 aa15.74■□□□□ 0.11
ACTN1-217ENST00000556203 TNFAIP3P21580 790 aa15.74■□□□□ 0.11
ACTN1-217ENST00000556203 HLA-FP30511 346 aa15.74■□□□□ 0.11
ACTN1-217ENST00000556203 HOXD11P31277 338 aaPredicted RBP15.74■□□□□ 0.11
ACTN1-217ENST00000556203 WASP42768 502 aa15.74■□□□□ 0.11
ACTN1-217ENST00000556203 DGKEP52429 567 aa15.74■□□□□ 0.11
ACTN1-217ENST00000556203 PTP4A2Q12974 167 aa15.74■□□□□ 0.11
ACTN1-217ENST00000556203 SRSF5Q13243 272 aaKnown RBP15.74■□□□□ 0.11
ACTN1-217ENST00000556203 SLC25A52Q3SY17 297 aa15.74■□□□□ 0.11
ACTN1-217ENST00000556203 TMEM92Q6UXU6 159 aa15.74■□□□□ 0.11
ACTN1-217ENST00000556203 CHPFQ8IZ52 775 aa15.74■□□□□ 0.11
ACTN1-217ENST00000556203 LGI2Q8N0V4 545 aa15.74■□□□□ 0.11
ACTN1-217ENST00000556203 CFAP52Q8N1V2 620 aa15.74■□□□□ 0.11
ACTN1-217ENST00000556203 EMC1Q8N766 993 aa15.74■□□□□ 0.11
ACTN1-217ENST00000556203 RNF214Q8ND24 703 aa15.74■□□□□ 0.11
ACTN1-217ENST00000556203 NT5C3BQ969T7 300 aa15.74■□□□□ 0.11
ACTN1-217ENST00000556203 CFAP57Q96MR6 1250 aa15.74■□□□□ 0.11
ACTN1-217ENST00000556203 ACOX2Q99424 681 aa15.74■□□□□ 0.11
ACTN1-217ENST00000556203 TBCBQ99426 244 aa15.74■□□□□ 0.11
ACTN1-217ENST00000556203 PIGVQ9NUD9 493 aa15.74■□□□□ 0.11
ACTN1-217ENST00000556203 AIPL1Q9NZN9 384 aa15.74■□□□□ 0.11
ACTN1-217ENST00000556203 KIAA1549LQ6ZVL6 1849 aa15.73■□□□□ 0.11
ACTN1-217ENST00000556203 CCDC163A0A0D9SF12 145 aa15.73■□□□□ 0.11
ACTN1-217ENST00000556203 F5H5T6 163 aa15.73■□□□□ 0.11
ACTN1-217ENST00000556203 AXIN1O15169 862 aa15.73■□□□□ 0.11
ACTN1-217ENST00000556203 GJB6O95452 261 aa15.73■□□□□ 0.11
ACTN1-217ENST00000556203 CALB1P05937 261 aa15.73■□□□□ 0.11
ACTN1-217ENST00000556203 NTSR1P30989 418 aa15.73■□□□□ 0.11
ACTN1-217ENST00000556203 DEUP1Q05D60 604 aa15.73■□□□□ 0.11
ACTN1-217ENST00000556203 RNF43Q68DV7 783 aa15.73■□□□□ 0.11
ACTN1-217ENST00000556203 ANO7Q6IWH7 933 aa15.73■□□□□ 0.11
ACTN1-217ENST00000556203 SND1Q7KZF4 910 aaKnown RBP eCLIP15.73■□□□□ 0.113e-8■□□□□ 8.1
ACTN1-217ENST00000556203 MON1BQ7L1V2 547 aa15.73■□□□□ 0.11
ACTN1-217ENST00000556203 ARCQ7LC44 396 aa15.73■□□□□ 0.11
ACTN1-217ENST00000556203 MFN1Q8IWA4 741 aa15.73■□□□□ 0.11
ACTN1-217ENST00000556203 WFDC5Q8TCV5 224 aa15.73■□□□□ 0.11
ACTN1-217ENST00000556203 UCMAQ8WVF2 138 aa15.73■□□□□ 0.11
ACTN1-217ENST00000556203 SORCS1Q8WY21 1168 aa15.73■□□□□ 0.11
ACTN1-217ENST00000556203 PGAP3Q96FM1 320 aaPredicted RBP15.73■□□□□ 0.11
ACTN1-217ENST00000556203 PRMT1Q99873 361 aaKnown RBP15.73■□□□□ 0.11
ACTN1-217ENST00000556203 SYT11Q9BT88 431 aa15.73■□□□□ 0.11
ACTN1-217ENST00000556203 CIPCQ9C0C6 399 aa15.73■□□□□ 0.11
ACTN1-217ENST00000556203 XPO4Q9C0E2 1151 aaKnown RBP15.73■□□□□ 0.11
ACTN1-217ENST00000556203 EPC1Q9H2F5 836 aa15.73■□□□□ 0.11
ACTN1-217ENST00000556203 HAUS4Q9H6D7 363 aa15.73■□□□□ 0.11
ACTN1-217ENST00000556203 WDCPQ9H6R7 721 aa15.73■□□□□ 0.11
ACTN1-217ENST00000556203 POLMQ9NP87 494 aaPredicted RBP15.73■□□□□ 0.11
ACTN1-217ENST00000556203 ABCB8Q9NUT2 735 aa15.73■□□□□ 0.11
ACTN1-217ENST00000556203 EBF1Q9UH73 591 aa15.73■□□□□ 0.11
ACTN1-217ENST00000556203 A0A1W2PQJ5 194 aa15.72■□□□□ 0.11
ACTN1-217ENST00000556203 TCRBV21S2A2A0A5A6 115 aa15.72■□□□□ 0.11
ACTN1-217ENST00000556203 ALDH1A2O94788 518 aa15.72■□□□□ 0.11
ACTN1-217ENST00000556203 ADCY5O95622 1261 aa15.72■□□□□ 0.11
ACTN1-217ENST00000556203 F9P00740 461 aa15.72■□□□□ 0.11
ACTN1-217ENST00000556203 TPM3P06753 285 aa15.72■□□□□ 0.11
ACTN1-217ENST00000556203 PABPC1P11940 636 aaKnown RBP15.72■□□□□ 0.11
ACTN1-217ENST00000556203 HOXB2P14652 356 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms