RNA–Protein interactions for RNA: ENST00000556013.2

PTCSC3-201, Transcript of papillary thyroid carcinoma susceptibility candidate 3, humanhuman

TSL 1 (best) BASIC

Gene PTCSC3, Length 571 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCSC3-201ENST00000556013 KCNH2Q12809 1159 aa8.11□□□□□ -1.11
PTCSC3-201ENST00000556013 MTA1Q13330 715 aa8.11□□□□□ -1.11
PTCSC3-201ENST00000556013 ARID5BQ14865 1188 aa8.11□□□□□ -1.11
PTCSC3-201ENST00000556013 PLEKHG6Q3KR16 790 aa8.11□□□□□ -1.11
PTCSC3-201ENST00000556013 CCDC40Q4G0X9 1142 aa8.11□□□□□ -1.11
PTCSC3-201ENST00000556013 PIK3R6Q5UE93 754 aa8.11□□□□□ -1.11
PTCSC3-201ENST00000556013 TMEM215Q68D42 235 aa8.11□□□□□ -1.11
PTCSC3-201ENST00000556013 TTI2Q6NXR4 508 aa8.11□□□□□ -1.11
PTCSC3-201ENST00000556013 PMF1Q6P1K2 205 aa8.11□□□□□ -1.11
PTCSC3-201ENST00000556013 KIAA1324Q6UXG2 1013 aaKnown RBP8.11□□□□□ -1.11
PTCSC3-201ENST00000556013 SERPINA13PQ6UXR4 307 aa8.11□□□□□ -1.11
PTCSC3-201ENST00000556013 ARMCX6Q7L4S7 300 aa8.11□□□□□ -1.11
PTCSC3-201ENST00000556013 PPM1KQ8N3J5 372 aa8.11□□□□□ -1.11
PTCSC3-201ENST00000556013 MINDY1Q8N5J2 469 aa8.11□□□□□ -1.11
PTCSC3-201ENST00000556013 DEFB124Q8NES8 71 aa8.11□□□□□ -1.11
PTCSC3-201ENST00000556013 FIBINQ8TAL6 211 aa8.11□□□□□ -1.11
PTCSC3-201ENST00000556013 UBA3Q8TBC4 463 aa8.11□□□□□ -1.11
PTCSC3-201ENST00000556013 TTC17Q96AE7 1141 aa8.11□□□□□ -1.11
PTCSC3-201ENST00000556013 TOE1Q96GM8 510 aaKnown RBP8.11□□□□□ -1.11
PTCSC3-201ENST00000556013 KIAA1522Q9P206 1035 aaPredicted RBP8.11□□□□□ -1.11
PTCSC3-201ENST00000556013 SFMBT1Q9UHJ3 866 aa8.11□□□□□ -1.11
PTCSC3-201ENST00000556013 MAN1B1Q9UKM7 699 aa8.11□□□□□ -1.11
PTCSC3-201ENST00000556013 TPX2Q9ULW0 747 aaKnown RBP8.11□□□□□ -1.11
PTCSC3-201ENST00000556013 CLEC4EQ9ULY5 219 aa8.11□□□□□ -1.11
PTCSC3-201ENST00000556013 MSRB2Q9Y3D2 182 aa8.11□□□□□ -1.11
PTCSC3-201ENST00000556013 PCDHB4Q9Y5E5 795 aa8.11□□□□□ -1.11
PTCSC3-201ENST00000556013 PCDHGB2Q9Y5G2 931 aa8.11□□□□□ -1.11
PTCSC3-201ENST00000556013 RAD54BQ9Y620 910 aa8.11□□□□□ -1.11
PTCSC3-201ENST00000556013 CHD8Q9HCK8 2581 aa8.1□□□□□ -1.11
PTCSC3-201ENST00000556013 TARSL2A2RTX5 802 aaKnown RBP8.1□□□□□ -1.11
PTCSC3-201ENST00000556013 TYW5A2RUC4 315 aaKnown RBP8.1□□□□□ -1.11
PTCSC3-201ENST00000556013 TRIM49BA6NDI0 452 aa8.1□□□□□ -1.11
PTCSC3-201ENST00000556013 KCNJ18B7U540 433 aa8.1□□□□□ -1.11
PTCSC3-201ENST00000556013 RNF225M0QZC1 329 aaPredicted RBP8.1□□□□□ -1.11
PTCSC3-201ENST00000556013 MED7O43513 233 aa8.1□□□□□ -1.11
PTCSC3-201ENST00000556013 LTFP02788 710 aa8.1□□□□□ -1.11
PTCSC3-201ENST00000556013 ASLP04424 464 aa8.1□□□□□ -1.11
PTCSC3-201ENST00000556013 EPHX1P07099 455 aa8.1□□□□□ -1.11
PTCSC3-201ENST00000556013 PABPC1P11940 636 aaKnown RBP8.1□□□□□ -1.11
PTCSC3-201ENST00000556013 MAPK8P45983 427 aa8.1□□□□□ -1.11
PTCSC3-201ENST00000556013 TBX4P57082 545 aa8.1□□□□□ -1.11
PTCSC3-201ENST00000556013 MORC3Q14149 939 aa8.1□□□□□ -1.11
PTCSC3-201ENST00000556013 SUZ12Q15022 739 aaKnown RBP8.1□□□□□ -1.11
PTCSC3-201ENST00000556013 UNQ6494/PRO21346Q6UXR6 183 aa8.1□□□□□ -1.11
PTCSC3-201ENST00000556013 CHST9Q7L1S5 443 aa8.1□□□□□ -1.11
PTCSC3-201ENST00000556013 GLRX5Q86SX6 157 aa8.1□□□□□ -1.11
PTCSC3-201ENST00000556013 TMEM110Q86TL2 294 aa8.1□□□□□ -1.11
PTCSC3-201ENST00000556013 ADIPOR2Q86V24 386 aa8.1□□□□□ -1.11
PTCSC3-201ENST00000556013 TRIM59Q8IWR1 403 aa8.1□□□□□ -1.11
PTCSC3-201ENST00000556013 DEFB119Q8N690 84 aa8.1□□□□□ -1.11
PTCSC3-201ENST00000556013 C1orf216Q8TAB5 229 aa8.1□□□□□ -1.11
PTCSC3-201ENST00000556013 TFAP2BQ92481 460 aa8.1□□□□□ -1.11
PTCSC3-201ENST00000556013 NDRG1Q92597 394 aaKnown RBP8.1□□□□□ -1.11
PTCSC3-201ENST00000556013 BHMTQ93088 406 aa8.1□□□□□ -1.11
PTCSC3-201ENST00000556013 SLC39A13Q96H72 371 aa8.1□□□□□ -1.11
PTCSC3-201ENST00000556013 SERPINB11Q96P15 392 aa8.1□□□□□ -1.11
PTCSC3-201ENST00000556013 MED15Q96RN5 788 aa8.1□□□□□ -1.11
PTCSC3-201ENST00000556013 PPP1R9BQ96SB3 815 aa8.1□□□□□ -1.11
PTCSC3-201ENST00000556013 GPR174Q9BXC1 333 aa8.1□□□□□ -1.11
PTCSC3-201ENST00000556013 TMEM121BQ9BXQ6 578 aaPredicted RBP8.1□□□□□ -1.11
PTCSC3-201ENST00000556013 SLC4A5Q9BY07 1137 aa8.1□□□□□ -1.11
PTCSC3-201ENST00000556013 ADAM33Q9BZ11 813 aa8.1□□□□□ -1.11
PTCSC3-201ENST00000556013 CIPCQ9C0C6 399 aa8.1□□□□□ -1.11
PTCSC3-201ENST00000556013 SGK2Q9HBY8 427 aa8.1□□□□□ -1.11
PTCSC3-201ENST00000556013 TLR6Q9Y2C9 796 aa8.1□□□□□ -1.11
PTCSC3-201ENST00000556013 PCDHB9Q9Y5E1 797 aa8.1□□□□□ -1.11
PTCSC3-201ENST00000556013 MAP1BP46821 2468 aaKnown RBP8.1□□□□□ -1.11
PTCSC3-201ENST00000556013 TNRC6BQ9UPQ9 1833 aaKnown RBP8.09□□□□□ -1.11
PTCSC3-201ENST00000556013 BCAT2O15382 392 aaPredicted RBP8.09□□□□□ -1.11
PTCSC3-201ENST00000556013 DFNA5O60443 496 aa8.09□□□□□ -1.11
PTCSC3-201ENST00000556013 GABBR2O75899 941 aa8.09□□□□□ -1.11
PTCSC3-201ENST00000556013 KRT37O76014 449 aa8.09□□□□□ -1.11
PTCSC3-201ENST00000556013 CER1O95813 267 aa8.09□□□□□ -1.11
PTCSC3-201ENST00000556013 AFPP02771 609 aaKnown RBP8.09□□□□□ -1.11
PTCSC3-201ENST00000556013 GLI1P08151 1106 aa8.09□□□□□ -1.11
PTCSC3-201ENST00000556013 SRPRAP08240 638 aaKnown RBP8.09□□□□□ -1.11
PTCSC3-201ENST00000556013 LCP1P13796 627 aa8.09□□□□□ -1.11
PTCSC3-201ENST00000556013 CD44P16070 742 aaKnown RBP8.09□□□□□ -1.11
PTCSC3-201ENST00000556013 POLR2EP19388 210 aaKnown RBP8.09□□□□□ -1.11
PTCSC3-201ENST00000556013 BMP6P22004 513 aa8.09□□□□□ -1.11
PTCSC3-201ENST00000556013 VASPP50552 380 aaPredicted RBP8.09□□□□□ -1.11
PTCSC3-201ENST00000556013 OXCT1P55809 520 aa8.09□□□□□ -1.11
PTCSC3-201ENST00000556013 LRMPQ12912 555 aa8.09□□□□□ -1.11
PTCSC3-201ENST00000556013 FOXC1Q12948 553 aa8.09□□□□□ -1.11
PTCSC3-201ENST00000556013 EIF4EBP2Q13542 120 aaPredicted RBP8.09□□□□□ -1.11
PTCSC3-201ENST00000556013 SLC12A1Q13621 1099 aa8.09□□□□□ -1.11
PTCSC3-201ENST00000556013 TRIP6Q15654 476 aaKnown RBP8.09□□□□□ -1.11
PTCSC3-201ENST00000556013 PTPRNQ16849 979 aa8.09□□□□□ -1.11
PTCSC3-201ENST00000556013 DCAF12L1Q5VU92 463 aa8.09□□□□□ -1.11
PTCSC3-201ENST00000556013 MBLAC2Q68D91 279 aa8.09□□□□□ -1.11
PTCSC3-201ENST00000556013 USP30Q70CQ3 517 aa8.09□□□□□ -1.11
PTCSC3-201ENST00000556013 CCDC117Q8IWD4 279 aaPredicted RBP8.09□□□□□ -1.11
PTCSC3-201ENST00000556013 NELFBQ8WX92 580 aa8.09□□□□□ -1.11
PTCSC3-201ENST00000556013 ZNF606Q8WXB4 792 aa8.09□□□□□ -1.11
PTCSC3-201ENST00000556013 ADAMTS14Q8WXS8 1223 aa8.09□□□□□ -1.11
PTCSC3-201ENST00000556013 EDEM1Q92611 657 aa8.09□□□□□ -1.11
PTCSC3-201ENST00000556013 GATA6Q92908 595 aa8.09□□□□□ -1.11
PTCSC3-201ENST00000556013 LMLNQ96KR4 655 aa8.09□□□□□ -1.11
PTCSC3-201ENST00000556013 ZSWIM1Q9BR11 485 aa8.09□□□□□ -1.11
PTCSC3-201ENST00000556013 SCNM1Q9BWG6 230 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms