RNA–Protein interactions for RNA: ENST00000555964.5

XRCC3-215, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4

Gene XRCC3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-215ENST00000555964 DNTTP04053 509 aa17.68■□□□□ 0.42
XRCC3-215ENST00000555964 CAPNS1P04632 268 aa17.68■□□□□ 0.42
XRCC3-215ENST00000555964 PRR29P0C7W0 189 aa17.68■□□□□ 0.42
XRCC3-215ENST00000555964 SETSIPP0DME0 302 aa17.68■□□□□ 0.42
XRCC3-215ENST00000555964 C7P10643 843 aa17.68■□□□□ 0.42
XRCC3-215ENST00000555964 HLA-FP30511 346 aa17.68■□□□□ 0.42
XRCC3-215ENST00000555964 GRIA4P48058 902 aa17.68■□□□□ 0.42
XRCC3-215ENST00000555964 ADIGQ0VDE8 80 aa17.68■□□□□ 0.42
XRCC3-215ENST00000555964 ZCWPW2Q504Y3 356 aa17.68■□□□□ 0.42
XRCC3-215ENST00000555964 CHST9Q7L1S5 443 aa17.68■□□□□ 0.42
XRCC3-215ENST00000555964 FAM124AQ86V42 546 aa17.68■□□□□ 0.42
XRCC3-215ENST00000555964 WDFY3Q8IZQ1 3526 aa17.68■□□□□ 0.42
XRCC3-215ENST00000555964 GALNT15Q8N3T1 639 aa17.68■□□□□ 0.42
XRCC3-215ENST00000555964 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.68■□□□□ 0.42
XRCC3-215ENST00000555964 PNPLA1Q8N8W4 532 aa17.68■□□□□ 0.42
XRCC3-215ENST00000555964 C1orf216Q8TAB5 229 aa17.68■□□□□ 0.42
XRCC3-215ENST00000555964 RHBDD1Q8TEB9 315 aa17.68■□□□□ 0.42
XRCC3-215ENST00000555964 SORCS1Q8WY21 1168 aa17.68■□□□□ 0.42
XRCC3-215ENST00000555964 SEMA4DQ92854 862 aa17.68■□□□□ 0.42
XRCC3-215ENST00000555964 TMEM245Q9H330 911 aa17.68■□□□□ 0.42
XRCC3-215ENST00000555964 SGK2Q9HBY8 427 aa17.68■□□□□ 0.42
XRCC3-215ENST00000555964 CNGB3Q9NQW8 809 aa17.68■□□□□ 0.42
XRCC3-215ENST00000555964 SUN2Q9UH99 717 aa17.68■□□□□ 0.42
XRCC3-215ENST00000555964 GGA2Q9UJY4 613 aa17.68■□□□□ 0.42
XRCC3-215ENST00000555964 KIAA1257Q9ULG3 409 aa17.68■□□□□ 0.42
XRCC3-215ENST00000555964 CLEC4EQ9ULY5 219 aa17.68■□□□□ 0.42
XRCC3-215ENST00000555964 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.68■□□□□ 0.42
XRCC3-215ENST00000555964 URB1O60287 2271 aaKnown RBP17.68■□□□□ 0.42
XRCC3-215ENST00000555964 A0A1B0GVT2 93 aa17.67■□□□□ 0.42
XRCC3-215ENST00000555964 TYW5A2RUC4 315 aaKnown RBP17.67■□□□□ 0.42
XRCC3-215ENST00000555964 TAF4O00268 1085 aa17.67■□□□□ 0.42
XRCC3-215ENST00000555964 PABPC1P11940 636 aaKnown RBP17.67■□□□□ 0.42
XRCC3-215ENST00000555964 HLA-EP13747 358 aa17.67■□□□□ 0.42
XRCC3-215ENST00000555964 CD19P15391 556 aa17.67■□□□□ 0.42
XRCC3-215ENST00000555964 TBXAS1P24557 533 aaPredicted RBP17.67■□□□□ 0.42
XRCC3-215ENST00000555964 NDUFA8P51970 172 aa17.67■□□□□ 0.42
XRCC3-215ENST00000555964 CUL2Q13617 745 aa17.67■□□□□ 0.42
XRCC3-215ENST00000555964 PKP1Q13835 747 aa17.67■□□□□ 0.42
XRCC3-215ENST00000555964 MPP7Q5T2T1 576 aa17.67■□□□□ 0.42
XRCC3-215ENST00000555964 TCERG1LQ5VWI1 586 aa17.67■□□□□ 0.42
XRCC3-215ENST00000555964 BSPRYQ5W0U4 402 aa17.67■□□□□ 0.42
XRCC3-215ENST00000555964 NUGGCQ68CJ6 796 aa17.67■□□□□ 0.42
XRCC3-215ENST00000555964 TMEM215Q68D42 235 aa17.67■□□□□ 0.42
XRCC3-215ENST00000555964 KRBA2Q6ZNG9 492 aa17.67■□□□□ 0.42
XRCC3-215ENST00000555964 UNC45BQ8IWX7 931 aa17.67■□□□□ 0.42
XRCC3-215ENST00000555964 SCML4Q8N228 414 aa17.67■□□□□ 0.42
XRCC3-215ENST00000555964 BAHD1Q8TBE0 780 aaPredicted RBP17.67■□□□□ 0.42
XRCC3-215ENST00000555964 TSG101Q99816 390 aa17.67■□□□□ 0.42
XRCC3-215ENST00000555964 SCAND2PQ9GZW5 306 aaPredicted RBP17.67■□□□□ 0.42
XRCC3-215ENST00000555964 IL21RQ9HBE5 538 aa17.67■□□□□ 0.42
XRCC3-215ENST00000555964 RMND1Q9NWS8 449 aa17.67■□□□□ 0.42
XRCC3-215ENST00000555964 SCML1Q9UN30 329 aa17.67■□□□□ 0.42
XRCC3-215ENST00000555964 GPSM3Q9Y4H4 160 aa17.67■□□□□ 0.42
XRCC3-215ENST00000555964 SPEGQ15772 3267 aa17.66■□□□□ 0.42
XRCC3-215ENST00000555964 A0A1W2PQ27 194 aa17.66■□□□□ 0.42
XRCC3-215ENST00000555964 A0A1W2PQ64 194 aa17.66■□□□□ 0.42
XRCC3-215ENST00000555964 SLC16A3O15427 465 aaKnown RBP17.66■□□□□ 0.42
XRCC3-215ENST00000555964 IRAK2O43187 625 aa17.66■□□□□ 0.42
XRCC3-215ENST00000555964 DFNA5O60443 496 aa17.66■□□□□ 0.42
XRCC3-215ENST00000555964 DLDP09622 509 aaKnown RBP17.66■□□□□ 0.42
XRCC3-215ENST00000555964 VDRP11473 427 aa17.66■□□□□ 0.42
XRCC3-215ENST00000555964 POLR2EP19388 210 aaKnown RBP17.66■□□□□ 0.42
XRCC3-215ENST00000555964 GRK6P43250 576 aa17.66■□□□□ 0.42
XRCC3-215ENST00000555964 SLC11A2P49281 568 aa17.66■□□□□ 0.42
XRCC3-215ENST00000555964 CCT8P50990 548 aa17.66■□□□□ 0.42
XRCC3-215ENST00000555964 DCAF17Q5H9S7 520 aaPredicted RBP17.66■□□□□ 0.42
XRCC3-215ENST00000555964 ZNF776Q68DI1 518 aaPredicted RBP17.66■□□□□ 0.42
XRCC3-215ENST00000555964 DBX2Q6ZNG2 339 aa17.66■□□□□ 0.42
XRCC3-215ENST00000555964 TMPRSS7Q7RTY8 843 aa17.66■□□□□ 0.42
XRCC3-215ENST00000555964 ADAT2Q7Z6V5 191 aaKnown RBP17.66■□□□□ 0.42
XRCC3-215ENST00000555964 SLCO6A1Q86UG4 719 aa17.66■□□□□ 0.42
XRCC3-215ENST00000555964 KCTD13Q8WZ19 329 aa17.66■□□□□ 0.42
XRCC3-215ENST00000555964 IGSF8Q969P0 613 aa17.66■□□□□ 0.42
XRCC3-215ENST00000555964 SKA1Q96BD8 255 aa17.66■□□□□ 0.42
XRCC3-215ENST00000555964 DDX50Q9BQ39 737 aaKnown RBP17.66■□□□□ 0.42
XRCC3-215ENST00000555964 C6orf106Q9H6K1 298 aaPredicted RBP17.66■□□□□ 0.42
XRCC3-215ENST00000555964 ABCB8Q9NUT2 735 aa17.66■□□□□ 0.42
XRCC3-215ENST00000555964 NCKAP1Q9Y2A7 1128 aa17.66■□□□□ 0.42
XRCC3-215ENST00000555964 TSPAN3O60637 253 aa17.65■□□□□ 0.42
XRCC3-215ENST00000555964 RNASEH1O60930 286 aaKnown RBP17.65■□□□□ 0.42
XRCC3-215ENST00000555964 CD27P26842 260 aa17.65■□□□□ 0.42
XRCC3-215ENST00000555964 ACSL1P33121 698 aa17.65■□□□□ 0.42
XRCC3-215ENST00000555964 CSNK1EP49674 416 aaKnown RBP17.65■□□□□ 0.42
XRCC3-215ENST00000555964 KIF19Q2TAC6 998 aa17.65■□□□□ 0.42
XRCC3-215ENST00000555964 MBLAC2Q68D91 279 aa17.65■□□□□ 0.42
XRCC3-215ENST00000555964 CCDC117Q8IWD4 279 aaPredicted RBP17.65■□□□□ 0.42
XRCC3-215ENST00000555964 CYB5D2Q8WUJ1 264 aa17.65■□□□□ 0.42
XRCC3-215ENST00000555964 TATDN2Q93075 761 aa17.65■□□□□ 0.42
XRCC3-215ENST00000555964 GTPBP4Q9BZE4 634 aaKnown RBP17.65■□□□□ 0.42
XRCC3-215ENST00000555964 TM9SF3Q9HD45 589 aa17.65■□□□□ 0.42
XRCC3-215ENST00000555964 DKK4Q9UBT3 224 aa17.65■□□□□ 0.42
XRCC3-215ENST00000555964 SFMBT1Q9UHJ3 866 aa17.65■□□□□ 0.42
XRCC3-215ENST00000555964 ANKRD6Q9Y2G4 727 aa17.65■□□□□ 0.42
XRCC3-215ENST00000555964 COQ4Q9Y3A0 265 aa17.65■□□□□ 0.42
XRCC3-215ENST00000555964 DMXL2Q8TDJ6 3036 aa17.65■□□□□ 0.42
XRCC3-215ENST00000555964 TNFSF14O43557 240 aa17.64■□□□□ 0.41
XRCC3-215ENST00000555964 PCDHGA12O60330 932 aa17.64■□□□□ 0.41
XRCC3-215ENST00000555964 DKK1O94907 266 aa17.64■□□□□ 0.41
XRCC3-215ENST00000555964 HOXB3P14651 431 aaPredicted RBP17.64■□□□□ 0.41
XRCC3-215ENST00000555964 ST8SIA6P61647 398 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms