RNA–Protein interactions for RNA: ENST00000555935.1

CHD8-209, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 2,617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-209ENST00000555935 COX4I2Q96KJ9 171 aa7.99□□□□□ -1.13
CHD8-209ENST00000555935 ZNF597Q96LX8 424 aa7.99□□□□□ -1.13
CHD8-209ENST00000555935 FERMT1Q9BQL6 677 aa7.99□□□□□ -1.13
CHD8-209ENST00000555935 CDH19Q9H159 772 aa7.99□□□□□ -1.13
CHD8-209ENST00000555935 PDZD7Q9H5P4 517 aa7.99□□□□□ -1.13
CHD8-209ENST00000555935 PNPLA3Q9NST1 481 aa7.99□□□□□ -1.13
CHD8-209ENST00000555935 TUBA8Q9NY65 449 aaPredicted RBP7.99□□□□□ -1.13
CHD8-209ENST00000555935 COPG2Q9UBF2 871 aa7.99□□□□□ -1.13
CHD8-209ENST00000555935 USP18Q9UMW8 372 aa7.99□□□□□ -1.13
CHD8-209ENST00000555935 ZNF541Q9H0D2 1346 aa7.99□□□□□ -1.13
CHD8-209ENST00000555935 ARHGEF37A1IGU5 675 aa7.99□□□□□ -1.13
CHD8-209ENST00000555935 TMEM114B3SHH9 223 aa7.99□□□□□ -1.13
CHD8-209ENST00000555935 H3BNH8 94 aa7.99□□□□□ -1.13
CHD8-209ENST00000555935 BOLA2-SMG1P6H3BVE0 249 aa7.99□□□□□ -1.13
CHD8-209ENST00000555935 PPEF1O14829 653 aaPredicted RBP7.99□□□□□ -1.13
CHD8-209ENST00000555935 MED7O43513 233 aa7.99□□□□□ -1.13
CHD8-209ENST00000555935 ENTPD3O75355 529 aa7.99□□□□□ -1.13
CHD8-209ENST00000555935 H2AFYO75367 372 aaKnown RBP7.99□□□□□ -1.13
CHD8-209ENST00000555935 E2F6O75461 281 aa7.99□□□□□ -1.13
CHD8-209ENST00000555935 ALDH1A2O94788 518 aa7.99□□□□□ -1.13
CHD8-209ENST00000555935 TOP3BO95985 862 aaKnown RBP7.99□□□□□ -1.13
CHD8-209ENST00000555935 ALDOAP04075 364 aaKnown RBP7.99□□□□□ -1.13
CHD8-209ENST00000555935 ZNF26P17031 533 aaPredicted RBP7.99□□□□□ -1.13
CHD8-209ENST00000555935 XRCC1P18887 633 aaPredicted RBP7.99□□□□□ -1.13
CHD8-209ENST00000555935 TGM2P21980 687 aa7.99□□□□□ -1.13
CHD8-209ENST00000555935 PIK3R1P27986 724 aa7.99□□□□□ -1.13
CHD8-209ENST00000555935 HMOX2P30519 316 aa7.99□□□□□ -1.13
CHD8-209ENST00000555935 HK2P52789 917 aa7.99□□□□□ -1.13
CHD8-209ENST00000555935 OXCT1P55809 520 aa7.99□□□□□ -1.13
CHD8-209ENST00000555935 PSMC1P62191 440 aaKnown RBP7.99□□□□□ -1.13
CHD8-209ENST00000555935 ESRRGP62508 458 aa7.99□□□□□ -1.13
CHD8-209ENST00000555935 MRPS9P82933 396 aaKnown RBP7.99□□□□□ -1.13
CHD8-209ENST00000555935 GSTM4Q03013 218 aa7.99□□□□□ -1.13
CHD8-209ENST00000555935 PEX6Q13608 980 aa7.99□□□□□ -1.13
CHD8-209ENST00000555935 PDE1CQ14123 709 aaPredicted RBP7.99□□□□□ -1.13
CHD8-209ENST00000555935 RFTN1Q14699 578 aaPredicted RBP7.99□□□□□ -1.13
CHD8-209ENST00000555935 C16orf72Q14CZ0 275 aa7.99□□□□□ -1.13
CHD8-209ENST00000555935 HERC3Q15034 1050 aa7.99□□□□□ -1.13
CHD8-209ENST00000555935 CYTH1Q15438 398 aa7.99□□□□□ -1.13
CHD8-209ENST00000555935 CCDC153Q494R4 210 aa7.99□□□□□ -1.13
CHD8-209ENST00000555935 PTPN20Q4JDL3 420 aa7.99□□□□□ -1.13
CHD8-209ENST00000555935 CCDC92Q53HC0 331 aaPredicted RBP7.99□□□□□ -1.13
CHD8-209ENST00000555935 VWA5B1Q5TIE3 1220 aa7.99□□□□□ -1.13
CHD8-209ENST00000555935 STEAP4Q687X5 459 aa7.99□□□□□ -1.13
CHD8-209ENST00000555935 NPNTQ6UXI9 565 aa7.99□□□□□ -1.13
CHD8-209ENST00000555935 CARM1Q86X55 608 aa7.99□□□□□ -1.13
CHD8-209ENST00000555935 GALNT4Q8N4A0 578 aa7.99□□□□□ -1.13
CHD8-209ENST00000555935 LZTR1Q8N653 840 aa7.99□□□□□ -1.13
CHD8-209ENST00000555935 BHLHE22Q8NFJ8 381 aaPredicted RBP7.99□□□□□ -1.13
CHD8-209ENST00000555935 RIN3Q8TB24 985 aa7.99□□□□□ -1.13
CHD8-209ENST00000555935 GIPC3Q8TF64 312 aa7.99□□□□□ -1.13
CHD8-209ENST00000555935 BORCS5Q969J3 196 aa7.99□□□□□ -1.13
CHD8-209ENST00000555935 LENG8Q96PV6 779 aaPredicted RBP7.99□□□□□ -1.13
CHD8-209ENST00000555935 RANBP9Q96S59 729 aa7.99□□□□□ -1.13
CHD8-209ENST00000555935 CDRT15Q96T59 188 aa7.99□□□□□ -1.13
CHD8-209ENST00000555935 MPHOSPH6Q99547 160 aaKnown RBP7.99□□□□□ -1.13
CHD8-209ENST00000555935 SLX1AQ9BQ83 275 aa7.99□□□□□ -1.13
CHD8-209ENST00000555935 OXCT2Q9BYC2 517 aaPredicted RBP7.99□□□□□ -1.13
CHD8-209ENST00000555935 NIF3L1Q9GZT8 377 aa7.99□□□□□ -1.13
CHD8-209ENST00000555935 COG4Q9H9E3 785 aa7.99□□□□□ -1.13
CHD8-209ENST00000555935 PDLIM7Q9NR12 457 aa7.99□□□□□ -1.13
CHD8-209ENST00000555935 CISHQ9NSE2 258 aa7.99□□□□□ -1.13
CHD8-209ENST00000555935 ASNSD1Q9NWL6 643 aa7.99□□□□□ -1.13
CHD8-209ENST00000555935 COL20A1Q9P218 1284 aa7.99□□□□□ -1.13
CHD8-209ENST00000555935 EPS15L1Q9UBC2 864 aa7.99□□□□□ -1.13
CHD8-209ENST00000555935 PCSK1NQ9UHG2 260 aa7.99□□□□□ -1.13
CHD8-209ENST00000555935 CCNL1Q9UK58 526 aaPredicted RBP7.99□□□□□ -1.13
CHD8-209ENST00000555935 FEM1BQ9UK73 627 aa7.99□□□□□ -1.13
CHD8-209ENST00000555935 CDH7Q9ULB5 785 aa7.99□□□□□ -1.13
CHD8-209ENST00000555935 TDRKHQ9Y2W6 561 aaKnown RBP7.99□□□□□ -1.13
CHD8-209ENST00000555935 RNF11Q9Y3C5 154 aa7.99□□□□□ -1.13
CHD8-209ENST00000555935 COL2A1P02458 1487 aaPredicted RBP7.99□□□□□ -1.13
CHD8-209ENST00000555935 MYH9P35579 1960 aaKnown RBP7.99□□□□□ -1.13
CHD8-209ENST00000555935 ADAMTSL1Q8N6G6 1762 aa7.99□□□□□ -1.13
CHD8-209ENST00000555935 TPP1O14773 563 aa7.99□□□□□ -1.13
CHD8-209ENST00000555935 AIM2O14862 343 aa7.99□□□□□ -1.13
CHD8-209ENST00000555935 ADCY6O43306 1168 aa7.99□□□□□ -1.13
CHD8-209ENST00000555935 KLHL41O60662 606 aa7.99□□□□□ -1.13
CHD8-209ENST00000555935 CLASP2O75122 1294 aaKnown RBP7.99□□□□□ -1.13
CHD8-209ENST00000555935 CCNE2O96020 404 aa7.99□□□□□ -1.13
CHD8-209ENST00000555935 ENTPD1P49961 510 aa7.99□□□□□ -1.13
CHD8-209ENST00000555935 CDH6P55285 790 aa7.99□□□□□ -1.13
CHD8-209ENST00000555935 NAA20P61599 178 aa7.99□□□□□ -1.13
CHD8-209ENST00000555935 FKBP1AP62942 108 aaKnown RBP7.99□□□□□ -1.13
CHD8-209ENST00000555935 RELAQ04206 551 aa7.99□□□□□ -1.13
CHD8-209ENST00000555935 BTG3Q14201 252 aaPredicted RBP7.99□□□□□ -1.13
CHD8-209ENST00000555935 KRT80Q6KB66 452 aa7.99□□□□□ -1.13
CHD8-209ENST00000555935 TRMT1LQ7Z2T5 733 aaKnown RBP7.99□□□□□ -1.13
CHD8-209ENST00000555935 SNX32Q86XE0 403 aa7.99□□□□□ -1.13
CHD8-209ENST00000555935 OR5B17Q8NGF7 314 aa7.99□□□□□ -1.13
CHD8-209ENST00000555935 SREK1Q8WXA9 508 aaKnown RBP7.99□□□□□ -1.13
CHD8-209ENST00000555935 ATP6V0A1Q93050 837 aa7.99□□□□□ -1.13
CHD8-209ENST00000555935 EME1Q96AY2 570 aa7.99□□□□□ -1.13
CHD8-209ENST00000555935 SGF29Q96ES7 293 aa7.99□□□□□ -1.13
CHD8-209ENST00000555935 RMND5BQ96G75 393 aaPredicted RBP7.99□□□□□ -1.13
CHD8-209ENST00000555935 PHF12Q96QT6 1004 aa7.99□□□□□ -1.13
CHD8-209ENST00000555935 CSRNP1Q96S65 589 aa7.99□□□□□ -1.13
CHD8-209ENST00000555935 MRPL40Q9NQ50 206 aaKnown RBP7.99□□□□□ -1.13
CHD8-209ENST00000555935 TCF7L2Q9NQB0 619 aa7.99□□□□□ -1.13
CHD8-209ENST00000555935 XPNPEP3Q9NQH7 507 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms