RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 TBC1D14Q9P2M4 693 aa11.59□□□□□ -0.55
SHMT2-220ENST00000555634 OR12D3Q9UGF7 316 aa11.59□□□□□ -0.55
SHMT2-220ENST00000555634 CDH7Q9ULB5 785 aa11.59□□□□□ -0.55
SHMT2-220ENST00000555634 NR2E1Q9Y466 385 aa11.59□□□□□ -0.55
SHMT2-220ENST00000555634 DOCK8Q8NF50 2099 aa11.58□□□□□ -0.56
SHMT2-220ENST00000555634 SHROOM3Q8TF72 1996 aa11.58□□□□□ -0.56
SHMT2-220ENST00000555634 LEFTY2O00292 366 aa11.58□□□□□ -0.56
SHMT2-220ENST00000555634 APOL1O14791 398 aa11.58□□□□□ -0.56
SHMT2-220ENST00000555634 DDX3YO15523 660 aaKnown RBP11.58□□□□□ -0.56
SHMT2-220ENST00000555634 ACSL4O60488 711 aa11.58□□□□□ -0.56
SHMT2-220ENST00000555634 STC2O76061 302 aa11.58□□□□□ -0.56
SHMT2-220ENST00000555634 KCNA5P22460 613 aa11.58□□□□□ -0.56
SHMT2-220ENST00000555634 KDELR1P24390 212 aa11.58□□□□□ -0.56
SHMT2-220ENST00000555634 WEE1P30291 646 aa11.58□□□□□ -0.56
SHMT2-220ENST00000555634 L1CAMP32004 1257 aa11.58□□□□□ -0.56
SHMT2-220ENST00000555634 CXCR5P32302 372 aa11.58□□□□□ -0.56
SHMT2-220ENST00000555634 PTPN7P35236 360 aa11.58□□□□□ -0.56
SHMT2-220ENST00000555634 CCR2P41597 374 aa11.58□□□□□ -0.56
SHMT2-220ENST00000555634 MARCKSL1P49006 195 aa11.58□□□□□ -0.56
SHMT2-220ENST00000555634 PGFP49763 221 aa11.58□□□□□ -0.56
SHMT2-220ENST00000555634 ATXN1P54253 815 aaKnown RBP11.58□□□□□ -0.56
SHMT2-220ENST00000555634 COL19A1Q14993 1142 aa11.58□□□□□ -0.56
SHMT2-220ENST00000555634 CCDC85BQ15834 202 aaPredicted RBP11.58□□□□□ -0.56
SHMT2-220ENST00000555634 LONRF2Q1L5Z9 754 aa11.58□□□□□ -0.56
SHMT2-220ENST00000555634 PUS10Q3MIT2 529 aaKnown RBP11.58□□□□□ -0.56
SHMT2-220ENST00000555634 STXBP5Q5T5C0 1151 aa11.58□□□□□ -0.56
SHMT2-220ENST00000555634 ADGRF1Q5T601 910 aa11.58□□□□□ -0.56
SHMT2-220ENST00000555634 TMCO3Q6UWJ1 677 aa11.58□□□□□ -0.56
SHMT2-220ENST00000555634 SPOCD1Q6ZMY3 1216 aa11.58□□□□□ -0.56
SHMT2-220ENST00000555634 DENND1CQ8IV53 801 aa11.58□□□□□ -0.56
SHMT2-220ENST00000555634 NPAS3Q8IXF0 933 aa11.58□□□□□ -0.56
SHMT2-220ENST00000555634 TDRD5Q8NAT2 981 aaKnown RBP11.58□□□□□ -0.56
SHMT2-220ENST00000555634 TTC13Q8NBP0 860 aa11.58□□□□□ -0.56
SHMT2-220ENST00000555634 HJURPQ8NCD3 748 aaPredicted RBP11.58□□□□□ -0.56
SHMT2-220ENST00000555634 SH3RF2Q8TEC5 729 aa11.58□□□□□ -0.56
SHMT2-220ENST00000555634 FGF13Q92913 245 aa11.58□□□□□ -0.56
SHMT2-220ENST00000555634 RNF25Q96BH1 459 aaPredicted RBP11.58□□□□□ -0.56
SHMT2-220ENST00000555634 SLC39A13Q96H72 371 aa11.58□□□□□ -0.56
SHMT2-220ENST00000555634 RPGRIP1Q96KN7 1286 aa11.58□□□□□ -0.56
SHMT2-220ENST00000555634 CAPZA3Q96KX2 299 aa11.58□□□□□ -0.56
SHMT2-220ENST00000555634 C1orf74Q96LT6 269 aa11.58□□□□□ -0.56
SHMT2-220ENST00000555634 RPRD1AQ96P16 312 aaPredicted RBP11.58□□□□□ -0.56
SHMT2-220ENST00000555634 PEBP4Q96S96 227 aa11.58□□□□□ -0.56
SHMT2-220ENST00000555634 KLF16Q9BXK1 252 aaPredicted RBP11.58□□□□□ -0.56
SHMT2-220ENST00000555634 OSBPL2Q9H1P3 480 aa11.58□□□□□ -0.56
SHMT2-220ENST00000555634 RETREG1Q9H6L5 497 aa11.58□□□□□ -0.56
SHMT2-220ENST00000555634 UBE2ZQ9H832 354 aaPredicted RBP11.58□□□□□ -0.56
SHMT2-220ENST00000555634 HOMER3Q9NSC5 361 aa11.58□□□□□ -0.56
SHMT2-220ENST00000555634 OBP2AQ9NY56 170 aa11.58□□□□□ -0.56
SHMT2-220ENST00000555634 CLEC1BQ9P126 229 aa11.58□□□□□ -0.56
SHMT2-220ENST00000555634 EFR3BQ9Y2G0 817 aa11.58□□□□□ -0.56
SHMT2-220ENST00000555634 PI4K2BG5E9Z4 385 aa11.57□□□□□ -0.56
SHMT2-220ENST00000555634 SRGAP2O75044 1071 aa11.57□□□□□ -0.56
SHMT2-220ENST00000555634 FGGP02679 453 aa11.57□□□□□ -0.56
SHMT2-220ENST00000555634 TCF3P15923 654 aa11.57□□□□□ -0.56
SHMT2-220ENST00000555634 IL1R2P27930 398 aa11.57□□□□□ -0.56
SHMT2-220ENST00000555634 EPHB2P29323 1055 aa11.57□□□□□ -0.56
SHMT2-220ENST00000555634 IFNAR2P48551 515 aa11.57□□□□□ -0.56
SHMT2-220ENST00000555634 NRG1Q02297 640 aaPredicted RBP11.57□□□□□ -0.56
SHMT2-220ENST00000555634 USP4Q13107 963 aa11.57□□□□□ -0.56
SHMT2-220ENST00000555634 ZNF211Q13398 564 aaPredicted RBP11.57□□□□□ -0.56
SHMT2-220ENST00000555634 DPYSL3Q14195 570 aa11.57□□□□□ -0.56
SHMT2-220ENST00000555634 KAZNQ674X7 775 aa11.57□□□□□ -0.56
SHMT2-220ENST00000555634 RFX8Q6ZV50 586 aa11.57□□□□□ -0.56
SHMT2-220ENST00000555634 Q7L0L9 218 aa11.57□□□□□ -0.56
SHMT2-220ENST00000555634 ARID3BQ8IVW6 561 aaPredicted RBP11.57□□□□□ -0.56
SHMT2-220ENST00000555634 CEP112Q8N8E3 955 aa11.57□□□□□ -0.56
SHMT2-220ENST00000555634 ITFG1Q8TB96 612 aa11.57□□□□□ -0.56
SHMT2-220ENST00000555634 PPM1EQ8WY54 764 aa11.57□□□□□ -0.56
SHMT2-220ENST00000555634 ALG3Q92685 438 aa11.57□□□□□ -0.56
SHMT2-220ENST00000555634 HAUS1Q96CS2 278 aa11.57□□□□□ -0.56
SHMT2-220ENST00000555634 CYP2S1Q96SQ9 504 aa11.57□□□□□ -0.56
SHMT2-220ENST00000555634 SLC46A2Q9BY10 475 aa11.57□□□□□ -0.56
SHMT2-220ENST00000555634 FRMD8P1Q9BZ68 369 aaPredicted RBP11.57□□□□□ -0.56
SHMT2-220ENST00000555634 OSBPL8Q9BZF1 889 aa11.57□□□□□ -0.56
SHMT2-220ENST00000555634 ZYG11BQ9C0D3 744 aa11.57□□□□□ -0.56
SHMT2-220ENST00000555634 RNF38Q9H0F5 515 aa11.57□□□□□ -0.56
SHMT2-220ENST00000555634 PCDH18Q9HCL0 1135 aa11.57□□□□□ -0.56
SHMT2-220ENST00000555634 ZFP14Q9HCL3 533 aa11.57□□□□□ -0.56
SHMT2-220ENST00000555634 HAUS2Q9NVX0 235 aa11.57□□□□□ -0.56
SHMT2-220ENST00000555634 GPATCH2LQ9NWQ4 482 aa11.57□□□□□ -0.56
SHMT2-220ENST00000555634 CDC23Q9UJX2 597 aa11.57□□□□□ -0.56
SHMT2-220ENST00000555634 USP15Q9Y4E8 981 aaPredicted RBP11.57□□□□□ -0.56
SHMT2-220ENST00000555634 KIAA1549LQ6ZVL6 1849 aa11.57□□□□□ -0.56
SHMT2-220ENST00000555634 MIA3Q5JRA6 1907 aa11.56□□□□□ -0.56
SHMT2-220ENST00000555634 E9PAM4 449 aa11.56□□□□□ -0.56
SHMT2-220ENST00000555634 ADH1CP00326 375 aa11.56□□□□□ -0.56
SHMT2-220ENST00000555634 TCF4P15884 667 aa11.56□□□□□ -0.56
SHMT2-220ENST00000555634 TACR2P21452 398 aa11.56□□□□□ -0.56
SHMT2-220ENST00000555634 TGM2P21980 687 aa11.56□□□□□ -0.56
SHMT2-220ENST00000555634 ETFBP38117 255 aa11.56□□□□□ -0.56
SHMT2-220ENST00000555634 CDKN2BP42772 138 aa11.56□□□□□ -0.56
SHMT2-220ENST00000555634 HCAR3P49019 387 aa11.56□□□□□ -0.56
SHMT2-220ENST00000555634 PEX5P50542 639 aa11.56□□□□□ -0.56
SHMT2-220ENST00000555634 KCNQ1P51787 676 aa11.56□□□□□ -0.56
SHMT2-220ENST00000555634 OXCT1P55809 520 aa11.56□□□□□ -0.56
SHMT2-220ENST00000555634 CDH18Q13634 790 aa11.56□□□□□ -0.56
SHMT2-220ENST00000555634 AAK1Q2M2I8 961 aa11.56□□□□□ -0.56
SHMT2-220ENST00000555634 ANKRD20A8PQ5CZ79 823 aa11.56□□□□□ -0.56
SHMT2-220ENST00000555634 MS4A13Q5J8X5 152 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms