RNA–Protein interactions for RNA: ENST00000555506.1

KTN1-222, Transcript of kinectin 1, human

TSL 1 (best)

Gene KTN1, Length 1,464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KTN1-222	ENST00000555506	TBC1D3	Q8IZP1	549 aa	Predicted RBP	4.89	□□□□□ -1.63
KTN1-222	ENST00000555506	TCP11L2	Q8N4U5	519 aa		4.89	□□□□□ -1.63
KTN1-222	ENST00000555506	PTGR2	Q8N8N7	351 aa	Predicted RBP	4.89	□□□□□ -1.63
KTN1-222	ENST00000555506	FAM71D	Q8N9W8	422 aa		4.89	□□□□□ -1.63
KTN1-222	ENST00000555506	BEND2	Q8NDZ0	799 aa		4.89	□□□□□ -1.63
KTN1-222	ENST00000555506	OR52L2P	Q8NGH6	319 aa		4.89	□□□□□ -1.63
KTN1-222	ENST00000555506	GPR150	Q8NGU9	434 aa		4.89	□□□□□ -1.63
KTN1-222	ENST00000555506	GLMP	Q8WWB7	406 aa		4.89	□□□□□ -1.63
KTN1-222	ENST00000555506	TFAP2B	Q92481	460 aa		4.89	□□□□□ -1.63
KTN1-222	ENST00000555506	RRP36	Q96EU6	259 aa	Known RBP	4.89	□□□□□ -1.63
KTN1-222	ENST00000555506	PIGS	Q96S52	555 aa		4.89	□□□□□ -1.63
KTN1-222	ENST00000555506	CINP	Q9BW66	212 aa	Predicted RBP	4.89	□□□□□ -1.63
KTN1-222	ENST00000555506	RMI1	Q9H9A7	625 aa		4.89	□□□□□ -1.63
KTN1-222	ENST00000555506	SAP30L	Q9HAJ7	183 aa		4.89	□□□□□ -1.63
KTN1-222	ENST00000555506	SNX15	Q9NRS6	342 aa		4.89	□□□□□ -1.63
KTN1-222	ENST00000555506	RAB21	Q9UL25	225 aa		4.89	□□□□□ -1.63
KTN1-222	ENST00000555506	AFG3L2	Q9Y4W6	797 aa		4.89	□□□□□ -1.63
KTN1-222	ENST00000555506	PCDHA10	Q9Y5I2	948 aa		4.89	□□□□□ -1.63
KTN1-222	ENST00000555506	BAIAP3	O94812	1187 aa		4.88	□□□□□ -1.63
KTN1-222	ENST00000555506	GC	P02774	474 aa		4.88	□□□□□ -1.63
KTN1-222	ENST00000555506	HNRNPA1	P09651	372 aa	Known RBP eCLIP	4.88	□□□□□ -1.63
KTN1-222	ENST00000555506	CAPN3	P20807	821 aa		4.88	□□□□□ -1.63
KTN1-222	ENST00000555506	LMO1	P25800	156 aa		4.88	□□□□□ -1.63
KTN1-222	ENST00000555506	ITPKB	P27987	946 aa		4.88	□□□□□ -1.63
KTN1-222	ENST00000555506	GRK5	P34947	590 aa		4.88	□□□□□ -1.63
KTN1-222	ENST00000555506	EIF5	P55010	431 aa	Known RBP	4.88	□□□□□ -1.63
KTN1-222	ENST00000555506	TXNL4A	P83876	142 aa	Known RBP	4.88	□□□□□ -1.63
KTN1-222	ENST00000555506	KRTAP15-1	Q3LI76	137 aa		4.88	□□□□□ -1.63
KTN1-222	ENST00000555506	TBC1D25	Q3MII6	688 aa		4.88	□□□□□ -1.63
KTN1-222	ENST00000555506	KAZN	Q674X7	775 aa		4.88	□□□□□ -1.63
KTN1-222	ENST00000555506	ANO7	Q6IWH7	933 aa		4.88	□□□□□ -1.63
KTN1-222	ENST00000555506	SYNE3	Q6ZMZ3	975 aa		4.88	□□□□□ -1.63
KTN1-222	ENST00000555506		Q6ZNX1	250 aa		4.88	□□□□□ -1.63
KTN1-222	ENST00000555506	ZNF551	Q7Z340	670 aa	Predicted RBP	4.88	□□□□□ -1.63
KTN1-222	ENST00000555506	WDR53	Q7Z5U6	358 aa	Predicted RBP	4.88	□□□□□ -1.63
KTN1-222	ENST00000555506	ST8SIA4	Q92187	359 aa		4.88	□□□□□ -1.63
KTN1-222	ENST00000555506	PRR11	Q96HE9	360 aa	Predicted RBP	4.88	□□□□□ -1.63
KTN1-222	ENST00000555506	AGXT2	Q9BYV1	514 aa		4.88	□□□□□ -1.63
KTN1-222	ENST00000555506	PREB	Q9HCU5	417 aa		4.88	□□□□□ -1.63
KTN1-222	ENST00000555506	ARHGEF3	Q9NR81	526 aa		4.88	□□□□□ -1.63
KTN1-222	ENST00000555506	DUSP22	Q9NRW4	184 aa		4.88	□□□□□ -1.63
KTN1-222	ENST00000555506	SERTAD4	Q9NUC0	356 aa		4.88	□□□□□ -1.63
KTN1-222	ENST00000555506	SYBU	Q9NX95	663 aa		4.88	□□□□□ -1.63
KTN1-222	ENST00000555506	DLL3	Q9NYJ7	618 aa		4.88	□□□□□ -1.63
KTN1-222	ENST00000555506	TBX20	Q9UMR3	447 aa		4.88	□□□□□ -1.63
KTN1-222	ENST00000555506	SLC12A4	Q9UP95	1085 aa		4.88	□□□□□ -1.63
KTN1-222	ENST00000555506	RCE1	Q9Y256	329 aa		4.88	□□□□□ -1.63
KTN1-222	ENST00000555506	MAST3	O60307	1309 aa		4.88	□□□□□ -1.63
KTN1-222	ENST00000555506	AGAP5	A6NIR3	686 aa		4.88	□□□□□ -1.63
KTN1-222	ENST00000555506	KLK10	O43240	276 aa		4.88	□□□□□ -1.63
KTN1-222	ENST00000555506	URI1	O94763	535 aa	Predicted RBP	4.88	□□□□□ -1.63
KTN1-222	ENST00000555506	IFIT1	P09914	478 aa	Known RBP	4.88	□□□□□ -1.63
KTN1-222	ENST00000555506	MYCL	P12524	364 aa	Predicted RBP	4.88	□□□□□ -1.63
KTN1-222	ENST00000555506	CPA1	P15085	419 aa		4.88	□□□□□ -1.63
KTN1-222	ENST00000555506	CYP2C18	P33260	490 aa		4.88	□□□□□ -1.63
KTN1-222	ENST00000555506	PNPLA4	P41247	253 aa		4.88	□□□□□ -1.63
KTN1-222	ENST00000555506	DIO1	P49895	249 aa		4.88	□□□□□ -1.63
KTN1-222	ENST00000555506	RCAN1	P53805	252 aa		4.88	□□□□□ -1.63
KTN1-222	ENST00000555506	FOXL2	P58012	376 aa		4.88	□□□□□ -1.63
KTN1-222	ENST00000555506	TAS2R50	P59544	299 aa		4.88	□□□□□ -1.63
KTN1-222	ENST00000555506	CCDC15	Q0P6D6	951 aa		4.88	□□□□□ -1.63
KTN1-222	ENST00000555506	LRRC24	Q50LG9	513 aa		4.88	□□□□□ -1.63
KTN1-222	ENST00000555506	WDR45B	Q5MNZ6	344 aa		4.88	□□□□□ -1.63
KTN1-222	ENST00000555506	HECTD2	Q5U5R9	776 aa		4.88	□□□□□ -1.63
KTN1-222	ENST00000555506	DSTYK	Q6XUX3	929 aa		4.88	□□□□□ -1.63
KTN1-222	ENST00000555506	ZSCAN2	Q7Z7L9	614 aa	Predicted RBP	4.88	□□□□□ -1.63
KTN1-222	ENST00000555506	ABHD11	Q8NFV4	315 aa		4.88	□□□□□ -1.63
KTN1-222	ENST00000555506	LINS1	Q8NG48	757 aa		4.88	□□□□□ -1.63
KTN1-222	ENST00000555506	TRMT61A	Q96FX7	289 aa	Known RBP	4.88	□□□□□ -1.63
KTN1-222	ENST00000555506	RBM17	Q96I25	401 aa	Known RBP	4.88	□□□□□ -1.63
KTN1-222	ENST00000555506	LENG8	Q96PV6	779 aa	Predicted RBP	4.88	□□□□□ -1.63
KTN1-222	ENST00000555506	ARHGAP39	Q9C0H5	1083 aa		4.88	□□□□□ -1.63
KTN1-222	ENST00000555506	PAIP1	Q9H074	479 aa	Known RBP	4.88	□□□□□ -1.63
KTN1-222	ENST00000555506	CDCP1	Q9H5V8	836 aa		4.88	□□□□□ -1.63
KTN1-222	ENST00000555506	CYP4F11	Q9HBI6	524 aa		4.88	□□□□□ -1.63
KTN1-222	ENST00000555506	ARHGAP26	Q9UNA1	814 aa		4.88	□□□□□ -1.63
KTN1-222	ENST00000555506	SCIN	Q9Y6U3	715 aa		4.88	□□□□□ -1.63
KTN1-222	ENST00000555506	C3orf70	A6NLC5	250 aa	Predicted RBP	4.87	□□□□□ -1.63
KTN1-222	ENST00000555506	PPFIA2	O75334	1257 aa		4.87	□□□□□ -1.63
KTN1-222	ENST00000555506	TBX18	O95935	607 aa		4.87	□□□□□ -1.63
KTN1-222	ENST00000555506	CSF1	P09603	554 aa		4.87	□□□□□ -1.63
KTN1-222	ENST00000555506	NPS	P0C0P6	89 aa		4.87	□□□□□ -1.63
KTN1-222	ENST00000555506	CHN1	P15882	459 aa		4.87	□□□□□ -1.63
KTN1-222	ENST00000555506	ENG	P17813	658 aa		4.87	□□□□□ -1.63
KTN1-222	ENST00000555506	MATN1	P21941	496 aa		4.87	□□□□□ -1.63
KTN1-222	ENST00000555506	PCP4	P48539	62 aa		4.87	□□□□□ -1.63
KTN1-222	ENST00000555506	KRTAP10-9	P60411	292 aa		4.87	□□□□□ -1.63
KTN1-222	ENST00000555506	GPC5	P78333	572 aa		4.87	□□□□□ -1.63
KTN1-222	ENST00000555506	RAE1	P78406	368 aa	Known RBP	4.87	□□□□□ -1.63
KTN1-222	ENST00000555506	PSG6	Q00889	435 aa		4.87	□□□□□ -1.63
KTN1-222	ENST00000555506	CBWD5	Q5RIA9	395 aa		4.87	□□□□□ -1.63
KTN1-222	ENST00000555506	L1TD1	Q5T7N2	865 aa	Known RBP	4.87	□□□□□ -1.63
KTN1-222	ENST00000555506	SLC9C2	Q5TAH2	1124 aa		4.87	□□□□□ -1.63
KTN1-222	ENST00000555506	WDR93	Q6P2C0	686 aa		4.87	□□□□□ -1.63
KTN1-222	ENST00000555506	ANKRD16	Q6P6B7	361 aa		4.87	□□□□□ -1.63
KTN1-222	ENST00000555506	TBC1D1	Q86TI0	1168 aa	Predicted RBP	4.87	□□□□□ -1.63
KTN1-222	ENST00000555506	SFTPA1	Q8IWL2	248 aa		4.87	□□□□□ -1.63
KTN1-222	ENST00000555506	LCORL	Q8N3X6	602 aa		4.87	□□□□□ -1.63
KTN1-222	ENST00000555506	SLC44A3	Q8N4M1	653 aa		4.87	□□□□□ -1.63
KTN1-222	ENST00000555506	ANKRD44	Q8N8A2	993 aa		4.87	□□□□□ -1.63

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