RNA–Protein interactions for RNA: ENST00000555405.5

NEK9-205, Transcript of NIMA related kinase 9, humanhuman

TSL 1 (best)

Gene NEK9, Length 3,357 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-205ENST00000555405 CORO1AP31146 461 aaKnown RBP10.54□□□□□ -0.72
NEK9-205ENST00000555405 GSCP56915 257 aaPredicted RBP10.54□□□□□ -0.72
NEK9-205ENST00000555405 AP1B1Q10567 949 aa10.54□□□□□ -0.72
NEK9-205ENST00000555405 CCDC25Q86WR0 208 aa10.54□□□□□ -0.72
NEK9-205ENST00000555405 CMASQ8NFW8 434 aaPredicted RBP10.54□□□□□ -0.72
NEK9-205ENST00000555405 CCDC26Q8TAB7 109 aa10.54□□□□□ -0.72
NEK9-205ENST00000555405 UXTQ9UBK9 157 aaPredicted RBP10.54□□□□□ -0.72
NEK9-205ENST00000555405 RNF14Q9UBS8 474 aa10.54□□□□□ -0.72
NEK9-205ENST00000555405 LZTS1Q9Y250 596 aa10.54□□□□□ -0.72
NEK9-205ENST00000555405 SH3BP1Q9Y3L3 701 aa10.54□□□□□ -0.72
NEK9-205ENST00000555405 TNRC18O15417 2968 aaPredicted RBP10.54□□□□□ -0.72
NEK9-205ENST00000555405 TNNT3P45378 269 aaPredicted RBP10.54□□□□□ -0.72
NEK9-205ENST00000555405 DR1Q01658 176 aa10.54□□□□□ -0.72
NEK9-205ENST00000555405 UBE3AQ05086 875 aa10.54□□□□□ -0.72
NEK9-205ENST00000555405 TFDP2Q14188 446 aa10.54□□□□□ -0.72
NEK9-205ENST00000555405 FAXCQ5TGI0 409 aa10.54□□□□□ -0.72
NEK9-205ENST00000555405 LRRC38Q5VT99 294 aa10.54□□□□□ -0.72
NEK9-205ENST00000555405 TTC27Q6P3X3 843 aa10.54□□□□□ -0.72
NEK9-205ENST00000555405 LRRC31Q6UY01 552 aa10.54□□□□□ -0.72
NEK9-205ENST00000555405 CYP4V2Q6ZWL3 525 aaPredicted RBP10.54□□□□□ -0.72
NEK9-205ENST00000555405 GET4Q7L5D6 327 aaPredicted RBP10.54□□□□□ -0.72
NEK9-205ENST00000555405 ATP6V0D2Q8N8Y2 350 aa10.54□□□□□ -0.72
NEK9-205ENST00000555405 FAM71DQ8N9W8 422 aa10.54□□□□□ -0.72
NEK9-205ENST00000555405 TTC8Q8TAM2 541 aa10.54□□□□□ -0.72
NEK9-205ENST00000555405 LRCH3Q96II8 777 aa10.54□□□□□ -0.72
NEK9-205ENST00000555405 CFAP97Q9P2B7 532 aa10.54□□□□□ -0.72
NEK9-205ENST00000555405 XIRP2A4UGR9 3374 aa10.54□□□□□ -0.72
NEK9-205ENST00000555405 MYO18AQ92614 2054 aaKnown RBP10.54□□□□□ -0.72
NEK9-205ENST00000555405 MCF2LO15068 1137 aa10.54□□□□□ -0.72
NEK9-205ENST00000555405 SCNN1AP37088 669 aa10.54□□□□□ -0.72
NEK9-205ENST00000555405 ADCY8P40145 1251 aa10.54□□□□□ -0.72
NEK9-205ENST00000555405 CXCR3P49682 368 aa10.54□□□□□ -0.72
NEK9-205ENST00000555405 POLNQ7Z5Q5 900 aa10.54□□□□□ -0.72
NEK9-205ENST00000555405 CENPIQ92674 756 aaPredicted RBP10.54□□□□□ -0.72
NEK9-205ENST00000555405 LGMNQ99538 433 aa10.54□□□□□ -0.72
NEK9-205ENST00000555405 PARD6BQ9BYG5 372 aa10.54□□□□□ -0.72
NEK9-205ENST00000555405 SMOC2Q9H3U7 446 aa10.54□□□□□ -0.72
NEK9-205ENST00000555405 COL4A6Q14031 1691 aa10.53□□□□□ -0.72
NEK9-205ENST00000555405 A0A0C4DFX4 3053 aa10.53□□□□□ -0.72
NEK9-205ENST00000555405 KCNK1O00180 336 aa10.53□□□□□ -0.72
NEK9-205ENST00000555405 FSCN2O14926 492 aa10.53□□□□□ -0.72
NEK9-205ENST00000555405 CNTN5O94779 1100 aa10.53□□□□□ -0.72
NEK9-205ENST00000555405 COILP38432 576 aaPredicted RBP10.53□□□□□ -0.72
NEK9-205ENST00000555405 PSEN1P49768 467 aa10.53□□□□□ -0.72
NEK9-205ENST00000555405 IRAK1P51617 712 aa10.53□□□□□ -0.72
NEK9-205ENST00000555405 RPS24P62847 133 aaKnown RBP10.53□□□□□ -0.72
NEK9-205ENST00000555405 COG7P83436 770 aa10.53□□□□□ -0.72
NEK9-205ENST00000555405 GRIN2CQ14957 1233 aa10.53□□□□□ -0.72
NEK9-205ENST00000555405 PDK2Q15119 407 aa10.53□□□□□ -0.72
NEK9-205ENST00000555405 SKIDA1Q1XH10 827 aa10.53□□□□□ -0.72
NEK9-205ENST00000555405 TMCO3Q6UWJ1 677 aa10.53□□□□□ -0.72
NEK9-205ENST00000555405 CCDC89Q8N998 374 aa10.53□□□□□ -0.72
NEK9-205ENST00000555405 PDZD8Q8NEN9 1154 aa10.53□□□□□ -0.72
NEK9-205ENST00000555405 ITFG1Q8TB96 612 aa10.53□□□□□ -0.72
NEK9-205ENST00000555405 NCAPGQ9BPX3 1015 aa10.53□□□□□ -0.72
NEK9-205ENST00000555405 SLC46A2Q9BY10 475 aa10.53□□□□□ -0.72
NEK9-205ENST00000555405 OLA1Q9NTK5 396 aaKnown RBP10.53□□□□□ -0.72
NEK9-205ENST00000555405 RRN3Q9NYV6 651 aa10.53□□□□□ -0.72
NEK9-205ENST00000555405 LCMT1Q9UIC8 334 aa10.53□□□□□ -0.72
NEK9-205ENST00000555405 HS3ST4Q9Y661 456 aa10.53□□□□□ -0.72
NEK9-205ENST00000555405 KCNU1A8MYU2 1149 aa10.53□□□□□ -0.72
NEK9-205ENST00000555405 AUHQ13825 339 aaKnown RBP10.53□□□□□ -0.72
NEK9-205ENST00000555405 BYSLQ13895 437 aaKnown RBP10.53□□□□□ -0.72
NEK9-205ENST00000555405 SLC5A9Q2M3M2 681 aa10.53□□□□□ -0.72
NEK9-205ENST00000555405 RFX8Q6ZV50 586 aa10.53□□□□□ -0.72
NEK9-205ENST00000555405 MAATS1Q7Z4T9 603 aa10.53□□□□□ -0.72
NEK9-205ENST00000555405 RASGEF1CQ8N431 466 aa10.53□□□□□ -0.72
NEK9-205ENST00000555405 ERLEC1Q96DZ1 483 aa10.53□□□□□ -0.72
NEK9-205ENST00000555405 SAMD11Q96NU1 681 aa10.53□□□□□ -0.72
NEK9-205ENST00000555405 PNKPQ96T60 521 aa10.53□□□□□ -0.72
NEK9-205ENST00000555405 DCLK3Q9C098 648 aa10.53□□□□□ -0.72
NEK9-205ENST00000555405 MTMR10Q9NXD2 777 aa10.53□□□□□ -0.72
NEK9-205ENST00000555405 CLIC5Q9NZA1 410 aa10.53□□□□□ -0.72
NEK9-205ENST00000555405 H3BQ06 376 aaPredicted RBP10.52□□□□□ -0.72
NEK9-205ENST00000555405 GOLGA8MH3BSY2 632 aa10.52□□□□□ -0.72
NEK9-205ENST00000555405 KCNN4O15554 427 aa10.52□□□□□ -0.72
NEK9-205ENST00000555405 ECEL1O95672 775 aa10.52□□□□□ -0.72
NEK9-205ENST00000555405 F11P03951 625 aa10.52□□□□□ -0.72
NEK9-205ENST00000555405 IL4RP24394 825 aa10.52□□□□□ -0.72
NEK9-205ENST00000555405 ACTN2P35609 894 aa10.52□□□□□ -0.72
NEK9-205ENST00000555405 HP1BP3Q5SSJ5 553 aaPredicted RBP10.52□□□□□ -0.72
NEK9-205ENST00000555405 TADA2BQ86TJ2 420 aa10.52□□□□□ -0.72
NEK9-205ENST00000555405 PAF1Q8N7H5 531 aa10.52□□□□□ -0.72
NEK9-205ENST00000555405 PLD5Q8N7P1 536 aa10.52□□□□□ -0.72
NEK9-205ENST00000555405 ARHGEF4Q9NR80 690 aa10.52□□□□□ -0.72
NEK9-205ENST00000555405 STK39Q9UEW8 545 aa10.52□□□□□ -0.72
NEK9-205ENST00000555405 CCL26Q9Y258 94 aa10.52□□□□□ -0.72
NEK9-205ENST00000555405 PTPRSQ13332 1948 aa10.52□□□□□ -0.72
NEK9-205ENST00000555405 BNIP3LO60238 219 aa10.52□□□□□ -0.73
NEK9-205ENST00000555405 PHF2O75151 1096 aa10.52□□□□□ -0.73
NEK9-205ENST00000555405 ENDOD1O94919 500 aa10.52□□□□□ -0.73
NEK9-205ENST00000555405 SLC11A2P49281 568 aa10.52□□□□□ -0.73
NEK9-205ENST00000555405 PLTPP55058 493 aa10.52□□□□□ -0.73
NEK9-205ENST00000555405 TRIP4Q15650 581 aaPredicted RBP10.52□□□□□ -0.73
NEK9-205ENST00000555405 ARHGAP15Q53QZ3 475 aa10.52□□□□□ -0.73
NEK9-205ENST00000555405 PIK3R6Q5UE93 754 aa10.52□□□□□ -0.73
NEK9-205ENST00000555405 Q7L0L9 218 aa10.52□□□□□ -0.73
NEK9-205ENST00000555405 KDELC2Q7Z4H8 507 aa10.52□□□□□ -0.73
NEK9-205ENST00000555405 PQLC3Q8N755 202 aa10.52□□□□□ -0.73
NEK9-205ENST00000555405 GLIS1Q8NBF1 620 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms