RNA–Protein interactions for RNA: ENST00000555252.5

MTHFD1-210, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 1 (best)

Gene MTHFD1, Length 2,053 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-210ENST00000555252 PAK5Q9P286 719 aa11.02□□□□□ -0.65
MTHFD1-210ENST00000555252 PRPF19Q9UMS4 504 aaKnown RBP11.02□□□□□ -0.65
MTHFD1-210ENST00000555252 PTPRFP10586 1907 aa11.02□□□□□ -0.65
MTHFD1-210ENST00000555252 PAPPA2Q9BXP8 1791 aa11.01□□□□□ -0.65
MTHFD1-210ENST00000555252 CILPO75339 1184 aa11.01□□□□□ -0.65
MTHFD1-210ENST00000555252 CD48P09326 243 aa11.01□□□□□ -0.65
MTHFD1-210ENST00000555252 CXCL8P10145 99 aa11.01□□□□□ -0.65
MTHFD1-210ENST00000555252 RAG1P15918 1043 aa11.01□□□□□ -0.65
MTHFD1-210ENST00000555252 GRK2P25098 689 aa11.01□□□□□ -0.65
MTHFD1-210ENST00000555252 ALDH1A3P47895 512 aa11.01□□□□□ -0.65
MTHFD1-210ENST00000555252 NR1H2P55055 460 aa11.01□□□□□ -0.65
MTHFD1-210ENST00000555252 MTTPP55157 894 aa11.01□□□□□ -0.65
MTHFD1-210ENST00000555252 EIF3EP60228 445 aaKnown RBP11.01□□□□□ -0.65
MTHFD1-210ENST00000555252 APOFQ13790 326 aa11.01□□□□□ -0.65
MTHFD1-210ENST00000555252 KRT81Q14533 505 aa11.01□□□□□ -0.65
MTHFD1-210ENST00000555252 TRIM50Q86XT4 487 aa11.01□□□□□ -0.65
MTHFD1-210ENST00000555252 SULF1Q8IWU6 871 aa11.01□□□□□ -0.65
MTHFD1-210ENST00000555252 PQLC1Q8N2U9 271 aa11.01□□□□□ -0.65
MTHFD1-210ENST00000555252 SLC25A41Q8N5S1 370 aa11.01□□□□□ -0.65
MTHFD1-210ENST00000555252 C1orf127Q8N9H9 656 aa11.01□□□□□ -0.65
MTHFD1-210ENST00000555252 SLC4A11Q8NBS3 891 aa11.01□□□□□ -0.65
MTHFD1-210ENST00000555252 KCTD6Q8NC69 237 aa11.01□□□□□ -0.65
MTHFD1-210ENST00000555252 ADCY4Q8NFM4 1077 aa11.01□□□□□ -0.65
MTHFD1-210ENST00000555252 JOSD2Q8TAC2 188 aa11.01□□□□□ -0.65
MTHFD1-210ENST00000555252 ADARB2Q9NS39 739 aaKnown RBP11.01□□□□□ -0.65
MTHFD1-210ENST00000555252 SIX4Q9UIU6 781 aa11.01□□□□□ -0.65
MTHFD1-210ENST00000555252 LACTBL1A8MY62 500 aa11□□□□□ -0.65
MTHFD1-210ENST00000555252 H3BNX3 289 aa11□□□□□ -0.65
MTHFD1-210ENST00000555252 B4GALT5O43286 388 aa11□□□□□ -0.65
MTHFD1-210ENST00000555252 PEX10O60683 326 aa11□□□□□ -0.65
MTHFD1-210ENST00000555252 MICAL2O94851 1124 aa11□□□□□ -0.65
MTHFD1-210ENST00000555252 C22orf31O95567 290 aa11□□□□□ -0.65
MTHFD1-210ENST00000555252 TRUB2O95900 331 aaKnown RBP11□□□□□ -0.65
MTHFD1-210ENST00000555252 STAG3L1P0CL83 205 aa11□□□□□ -0.65
MTHFD1-210ENST00000555252 TXNP10599 105 aaKnown RBP11□□□□□ -0.65
MTHFD1-210ENST00000555252 SERPINB6P35237 376 aa11□□□□□ -0.65
MTHFD1-210ENST00000555252 OSTNP61366 133 aa11□□□□□ -0.65
MTHFD1-210ENST00000555252 SLC25A3Q00325 362 aa11□□□□□ -0.65
MTHFD1-210ENST00000555252 USP4Q13107 963 aa11□□□□□ -0.65
MTHFD1-210ENST00000555252 LAMC2Q13753 1193 aa11□□□□□ -0.65
MTHFD1-210ENST00000555252 UBAP2LQ14157 1087 aaKnown RBP11□□□□□ -0.65
MTHFD1-210ENST00000555252 STILQ15468 1287 aa11□□□□□ -0.65
MTHFD1-210ENST00000555252 FSCBQ5H9T9 825 aa11□□□□□ -0.65
MTHFD1-210ENST00000555252 MDH1BQ5I0G3 518 aa11□□□□□ -0.65
MTHFD1-210ENST00000555252 FBXL19Q6PCT2 694 aa11□□□□□ -0.65
MTHFD1-210ENST00000555252 FASTKD5Q7L8L6 764 aaKnown RBP11□□□□□ -0.65
MTHFD1-210ENST00000555252 ZNF554Q86TJ5 538 aa11□□□□□ -0.65
MTHFD1-210ENST00000555252 RFX6Q8HWS3 928 aa11□□□□□ -0.65
MTHFD1-210ENST00000555252 IGDCC3Q8IVU1 814 aa11□□□□□ -0.65
MTHFD1-210ENST00000555252 UNC45BQ8IWX7 931 aa11□□□□□ -0.65
MTHFD1-210ENST00000555252 ANKRD13AQ8IZ07 590 aa11□□□□□ -0.65
MTHFD1-210ENST00000555252 PPM1NQ8N819 430 aa11□□□□□ -0.65
MTHFD1-210ENST00000555252 MCUQ8NE86 351 aa11□□□□□ -0.65
MTHFD1-210ENST00000555252 SHCBP1Q8NEM2 672 aa11□□□□□ -0.65
MTHFD1-210ENST00000555252 RTP4Q96DX8 246 aa11□□□□□ -0.65
MTHFD1-210ENST00000555252 DCUN1D1Q96GG9 259 aa11□□□□□ -0.65
MTHFD1-210ENST00000555252 CPXM1Q96SM3 734 aa11□□□□□ -0.65
MTHFD1-210ENST00000555252 SERPINI1Q99574 410 aa11□□□□□ -0.65
MTHFD1-210ENST00000555252 VPS28Q9UK41 221 aa11□□□□□ -0.65
MTHFD1-210ENST00000555252 CNOT11Q9UKZ1 510 aaKnown RBP11□□□□□ -0.65
MTHFD1-210ENST00000555252 KCNH4Q9UQ05 1017 aa11□□□□□ -0.65
MTHFD1-210ENST00000555252 LZTS1Q9Y250 596 aa11□□□□□ -0.65
MTHFD1-210ENST00000555252 COL1A2P08123 1366 aa11□□□□□ -0.65
MTHFD1-210ENST00000555252 H0YJX3 145 aa11□□□□□ -0.65
MTHFD1-210ENST00000555252 TXNDC9O14530 226 aa11□□□□□ -0.65
MTHFD1-210ENST00000555252 SIN3BO75182 1162 aa11□□□□□ -0.65
MTHFD1-210ENST00000555252 APOEP02649 317 aa11□□□□□ -0.65
MTHFD1-210ENST00000555252 ERBB2P04626 1255 aa11□□□□□ -0.65
MTHFD1-210ENST00000555252 CAPNS1P04632 268 aa11□□□□□ -0.65
MTHFD1-210ENST00000555252 PGK2P07205 417 aa11□□□□□ -0.65
MTHFD1-210ENST00000555252 RBP3P10745 1247 aa11□□□□□ -0.65
MTHFD1-210ENST00000555252 CDK4P11802 303 aa11□□□□□ -0.65
MTHFD1-210ENST00000555252 IL1R2P27930 398 aa11□□□□□ -0.65
MTHFD1-210ENST00000555252 TPP2P29144 1249 aaPredicted RBP11□□□□□ -0.65
MTHFD1-210ENST00000555252 ZNF143P52747 638 aaPredicted RBP11□□□□□ -0.65
MTHFD1-210ENST00000555252 ADARP55265 1226 aaKnown RBP11□□□□□ -0.65
MTHFD1-210ENST00000555252 ROR1Q01973 937 aa11□□□□□ -0.65
MTHFD1-210ENST00000555252 PPIL2Q13356 520 aa11□□□□□ -0.65
MTHFD1-210ENST00000555252 TFDP2Q14188 446 aa11□□□□□ -0.65
MTHFD1-210ENST00000555252 NOMO1Q15155 1222 aa11□□□□□ -0.65
MTHFD1-210ENST00000555252 GRAMD1BQ3KR37 738 aa11□□□□□ -0.65
MTHFD1-210ENST00000555252 NADK2Q4G0N4 442 aa11□□□□□ -0.65
MTHFD1-210ENST00000555252 FAM47CQ5HY64 1035 aa11□□□□□ -0.65
MTHFD1-210ENST00000555252 METTL21CQ5VZV1 264 aa11□□□□□ -0.65
MTHFD1-210ENST00000555252 ARFGAP1Q8N6T3 406 aa11□□□□□ -0.65
MTHFD1-210ENST00000555252 PPP4R1Q8TF05 950 aa11□□□□□ -0.65
MTHFD1-210ENST00000555252 GAB3Q8WWW8 586 aa11□□□□□ -0.65
MTHFD1-210ENST00000555252 CNKSR2Q8WXI2 1034 aa11□□□□□ -0.65
MTHFD1-210ENST00000555252 DLG3Q92796 817 aa11□□□□□ -0.65
MTHFD1-210ENST00000555252 ADPGKQ9BRR6 497 aa11□□□□□ -0.65
MTHFD1-210ENST00000555252 RTKNQ9BST9 563 aa11□□□□□ -0.65
MTHFD1-210ENST00000555252 HAUS8Q9BT25 410 aa11□□□□□ -0.65
MTHFD1-210ENST00000555252 MECRQ9BV79 373 aa11□□□□□ -0.65
MTHFD1-210ENST00000555252 SDCBP2Q9H190 292 aa11□□□□□ -0.65
MTHFD1-210ENST00000555252 ELP3Q9H9T3 547 aa11□□□□□ -0.65
MTHFD1-210ENST00000555252 POPDC2Q9HBU9 364 aa11□□□□□ -0.65
MTHFD1-210ENST00000555252 CYTH4Q9UIA0 394 aa11□□□□□ -0.65
MTHFD1-210ENST00000555252 ARHGAP26Q9UNA1 814 aa11□□□□□ -0.65
MTHFD1-210ENST00000555252 PCDHGA4Q9Y5G9 962 aa11□□□□□ -0.65
MTHFD1-210ENST00000555252 GPR25O00155 361 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms