RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 ELMO1Q92556 727 aa7.04□□□□□ -1.28
SYNE2-216ENST00000555002 DPY30Q9C005 99 aa7.04□□□□□ -1.28
SYNE2-216ENST00000555002 AASDHPPTQ9NRN7 309 aa7.04□□□□□ -1.28
SYNE2-216ENST00000555002 DAPK2Q9UIK4 370 aa7.04□□□□□ -1.28
SYNE2-216ENST00000555002 USP18Q9UMW8 372 aa7.04□□□□□ -1.28
SYNE2-216ENST00000555002 COG5Q9UP83 839 aa7.04□□□□□ -1.28
SYNE2-216ENST00000555002 PBRM1Q86U86 1689 aa7.04□□□□□ -1.28
SYNE2-216ENST00000555002 POLR1AO95602 1720 aaPredicted RBP7.04□□□□□ -1.28
SYNE2-216ENST00000555002 PSMD9O00233 223 aa7.03□□□□□ -1.28
SYNE2-216ENST00000555002 KPNA5O15131 536 aa7.03□□□□□ -1.28
SYNE2-216ENST00000555002 RAG1P15918 1043 aa7.03□□□□□ -1.28
SYNE2-216ENST00000555002 PHF21BQ96EK2 531 aa7.03□□□□□ -1.28
SYNE2-216ENST00000555002 WDR24Q96S15 920 aa7.03□□□□□ -1.28
SYNE2-216ENST00000555002 DSN1Q9H410 356 aa7.03□□□□□ -1.28
SYNE2-216ENST00000555002 GPR108Q9NPR9 543 aa7.03□□□□□ -1.28
SYNE2-216ENST00000555002 PRMT7Q9NVM4 692 aaPredicted RBP7.03□□□□□ -1.28
SYNE2-216ENST00000555002 GRID1Q9ULK0 1009 aa7.03□□□□□ -1.28
SYNE2-216ENST00000555002 MRPS7Q9Y2R9 242 aaKnown RBP7.03□□□□□ -1.28
SYNE2-216ENST00000555002 CRYL1Q9Y2S2 319 aa7.03□□□□□ -1.28
SYNE2-216ENST00000555002 UBA1P22314 1058 aaKnown RBP7.03□□□□□ -1.28
SYNE2-216ENST00000555002 GRB14Q14449 540 aa7.03□□□□□ -1.28
SYNE2-216ENST00000555002 CYP2A13Q16696 494 aa7.03□□□□□ -1.28
SYNE2-216ENST00000555002 BARGINQ6ZT62 677 aa7.03□□□□□ -1.28
SYNE2-216ENST00000555002 TMEM132CQ8N3T6 1108 aa7.03□□□□□ -1.28
SYNE2-216ENST00000555002 CXorf40AQ8TE69 158 aa7.03□□□□□ -1.28
SYNE2-216ENST00000555002 DNAJC13O75165 2243 aa7.03□□□□□ -1.28
SYNE2-216ENST00000555002 KIAA0391O15091 583 aaKnown RBP7.03□□□□□ -1.28
SYNE2-216ENST00000555002 POMCP01189 267 aa7.03□□□□□ -1.28
SYNE2-216ENST00000555002 FGFR3P22607 806 aa7.03□□□□□ -1.28
SYNE2-216ENST00000555002 INSCQ1MX18 579 aa7.03□□□□□ -1.28
SYNE2-216ENST00000555002 EML3Q32P44 896 aa7.03□□□□□ -1.28
SYNE2-216ENST00000555002 TKFCQ3LXA3 575 aa7.03□□□□□ -1.28
SYNE2-216ENST00000555002 SEZ6Q53EL9 994 aa7.03□□□□□ -1.28
SYNE2-216ENST00000555002 MFSD7Q6UXD7 560 aa7.03□□□□□ -1.28
SYNE2-216ENST00000555002 LGI2Q8N0V4 545 aa7.03□□□□□ -1.28
SYNE2-216ENST00000555002 EFCAB3Q8N7B9 438 aa7.03□□□□□ -1.28
SYNE2-216ENST00000555002 NMD3Q96D46 503 aaKnown RBP7.03□□□□□ -1.28
SYNE2-216ENST00000555002 EPORP19235 508 aa7.03□□□□□ -1.28
SYNE2-216ENST00000555002 RPL10AP62906 217 aaKnown RBP7.03□□□□□ -1.28
SYNE2-216ENST00000555002 POU6F1Q14863 301 aa7.03□□□□□ -1.28
SYNE2-216ENST00000555002 GPAT3Q53EU6 434 aa7.03□□□□□ -1.28
SYNE2-216ENST00000555002 MPPE1Q53F39 396 aa7.03□□□□□ -1.28
SYNE2-216ENST00000555002 LIN54Q6MZP7 749 aa7.03□□□□□ -1.28
SYNE2-216ENST00000555002 ZNF280DQ6N043 979 aa7.03□□□□□ -1.28
SYNE2-216ENST00000555002 RBM43Q6ZSC3 357 aaKnown RBP7.03□□□□□ -1.28
SYNE2-216ENST00000555002 GALNTL5Q7Z4T8 443 aa7.03□□□□□ -1.28
SYNE2-216ENST00000555002 SMYD1Q8NB12 490 aa7.03□□□□□ -1.28
SYNE2-216ENST00000555002 KBTBD7Q8WVZ9 684 aa7.03□□□□□ -1.28
SYNE2-216ENST00000555002 CCT8L2Q96SF2 557 aa7.03□□□□□ -1.28
SYNE2-216ENST00000555002 ABCC2Q92887 1545 aa7.03□□□□□ -1.28
SYNE2-216ENST00000555002 TMEM114B3SHH9 223 aa7.03□□□□□ -1.28
SYNE2-216ENST00000555002 CYP2A6P11509 494 aaPredicted RBP7.03□□□□□ -1.28
SYNE2-216ENST00000555002 CYP2F1P24903 491 aa7.03□□□□□ -1.28
SYNE2-216ENST00000555002 PNPLA4P41247 253 aa7.03□□□□□ -1.28
SYNE2-216ENST00000555002 ZBTB49Q6ZSB9 765 aa7.03□□□□□ -1.28
SYNE2-216ENST00000555002 SCUBE1Q8IWY4 988 aa7.03□□□□□ -1.28
SYNE2-216ENST00000555002 FEZF2Q8TBJ5 459 aa7.03□□□□□ -1.28
SYNE2-216ENST00000555002 GBA2Q9HCG7 927 aaPredicted RBP7.03□□□□□ -1.28
SYNE2-216ENST00000555002 HMG20AQ9NP66 347 aa7.03□□□□□ -1.28
SYNE2-216ENST00000555002 ANO9A1A5B4 782 aa7.03□□□□□ -1.28
SYNE2-216ENST00000555002 TM9SF1O15321 606 aa7.03□□□□□ -1.28
SYNE2-216ENST00000555002 FOXN1O15353 648 aa7.03□□□□□ -1.28
SYNE2-216ENST00000555002 AP1S2P56377 157 aa7.03□□□□□ -1.28
SYNE2-216ENST00000555002 SMCO1Q147U7 214 aa7.03□□□□□ -1.28
SYNE2-216ENST00000555002 ARRDC4Q8NCT1 418 aa7.03□□□□□ -1.28
SYNE2-216ENST00000555002 SYT15Q9BQS2 421 aa7.03□□□□□ -1.28
SYNE2-216ENST00000555002 CEP41Q9BYV8 373 aa7.03□□□□□ -1.28
SYNE2-216ENST00000555002 CELF4Q9BZC1 486 aaKnown RBP7.03□□□□□ -1.28
SYNE2-216ENST00000555002 KLHL4Q9C0H6 718 aa7.03□□□□□ -1.28
SYNE2-216ENST00000555002 ADPRHL2Q9NX46 363 aa7.03□□□□□ -1.28
SYNE2-216ENST00000555002 TCOF1Q13428 1488 aaKnown RBP7.03□□□□□ -1.28
SYNE2-216ENST00000555002 STAT5AP42229 794 aa7.03□□□□□ -1.28
SYNE2-216ENST00000555002 OMPP47874 163 aa7.03□□□□□ -1.28
SYNE2-216ENST00000555002 CXorf40BQ96DE9 158 aa7.03□□□□□ -1.28
SYNE2-216ENST00000555002 IGSF9BQ9UPX0 1349 aa7.03□□□□□ -1.28
SYNE2-216ENST00000555002 MYMKA6NI61 221 aa7.03□□□□□ -1.28
SYNE2-216ENST00000555002 RAD51BO15315 384 aa7.03□□□□□ -1.28
SYNE2-216ENST00000555002 INPP4BO15327 924 aa7.03□□□□□ -1.28
SYNE2-216ENST00000555002 BCL10O95999 233 aa7.03□□□□□ -1.28
SYNE2-216ENST00000555002 JCHAINP01591 159 aa7.03□□□□□ -1.28
SYNE2-216ENST00000555002 AMHP03971 560 aa7.03□□□□□ -1.28
SYNE2-216ENST00000555002 COX7A2P14406 83 aa7.03□□□□□ -1.28
SYNE2-216ENST00000555002 FMO4P31512 558 aa7.03□□□□□ -1.28
SYNE2-216ENST00000555002 TCF7P36402 384 aaPredicted RBP7.03□□□□□ -1.28
SYNE2-216ENST00000555002 SPANXN2Q5MJ10 180 aa7.03□□□□□ -1.28
SYNE2-216ENST00000555002 TPGS1Q6ZTW0 290 aa7.03□□□□□ -1.28
SYNE2-216ENST00000555002 SUGP1Q8IWZ8 645 aaKnown RBP7.03□□□□□ -1.28
SYNE2-216ENST00000555002 EID3Q8N140 333 aa7.03□□□□□ -1.28
SYNE2-216ENST00000555002 ZNF483Q8TF39 744 aaPredicted RBP7.03□□□□□ -1.28
SYNE2-216ENST00000555002 ATL1Q8WXF7 558 aa7.03□□□□□ -1.28
SYNE2-216ENST00000555002 TARS2Q9BW92 718 aaKnown RBP7.03□□□□□ -1.28
SYNE2-216ENST00000555002 PDGFDQ9GZP0 370 aaPredicted RBP7.03□□□□□ -1.28
SYNE2-216ENST00000555002 CLEC4AQ9UMR7 237 aa7.03□□□□□ -1.28
SYNE2-216ENST00000555002 ABHD14A-ACY1A0A1B0GW23 586 aa7.03□□□□□ -1.28
SYNE2-216ENST00000555002 FAM92AA1XBS5 289 aa7.03□□□□□ -1.28
SYNE2-216ENST00000555002 ZNF208O43345 1280 aa7.03□□□□□ -1.28
SYNE2-216ENST00000555002 HNF4AP41235 474 aa7.03□□□□□ -1.28
SYNE2-216ENST00000555002 ITGA1P56199 1179 aa7.03□□□□□ -1.28
SYNE2-216ENST00000555002 AP5B1Q2VPB7 878 aa7.03□□□□□ -1.28
SYNE2-216ENST00000555002 PREPLQ4J6C6 727 aaPredicted RBP7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms