RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 SFNP31947 248 aa16.09■□□□□ 0.17
SYNE3-203ENST00000554873 CLDN10P78369 228 aa16.09■□□□□ 0.17
SYNE3-203ENST00000554873 KRT76Q01546 638 aa16.09■□□□□ 0.17
SYNE3-203ENST00000554873 GHRHRQ02643 423 aa16.09■□□□□ 0.17
SYNE3-203ENST00000554873 ZFYVE27Q5T4F4 411 aa16.09■□□□□ 0.17
SYNE3-203ENST00000554873 PHF13Q86YI8 300 aaPredicted RBP16.09■□□□□ 0.17
SYNE3-203ENST00000554873 RCOR2Q8IZ40 523 aa16.09■□□□□ 0.17
SYNE3-203ENST00000554873 FEZF2Q8TBJ5 459 aa16.09■□□□□ 0.17
SYNE3-203ENST00000554873 VCPIP1Q96JH7 1222 aa16.09■□□□□ 0.17
SYNE3-203ENST00000554873 SLITRK1Q96PX8 696 aa16.09■□□□□ 0.17
SYNE3-203ENST00000554873 EHD1Q9H4M9 534 aa16.09■□□□□ 0.17
SYNE3-203ENST00000554873 CAAP1Q9H8G2 361 aa16.09■□□□□ 0.17
SYNE3-203ENST00000554873 EPS15L1Q9UBC2 864 aa16.09■□□□□ 0.17
SYNE3-203ENST00000554873 KLHL3Q9UH77 587 aa16.09■□□□□ 0.17
SYNE3-203ENST00000554873 CNOT11Q9UKZ1 510 aaKnown RBP16.09■□□□□ 0.17
SYNE3-203ENST00000554873 B3GNT3Q9Y2A9 372 aa16.09■□□□□ 0.17
SYNE3-203ENST00000554873 A0A0B4J269 797 aa16.09■□□□□ 0.17
SYNE3-203ENST00000554873 VNN1O95497 513 aa16.09■□□□□ 0.17
SYNE3-203ENST00000554873 GNA15P30679 374 aa16.09■□□□□ 0.17
SYNE3-203ENST00000554873 TUBB3Q13509 450 aa16.09■□□□□ 0.17
SYNE3-203ENST00000554873 NR1D2Q14995 579 aa16.09■□□□□ 0.17
SYNE3-203ENST00000554873 CES4AQ5XG92 561 aa16.09■□□□□ 0.17
SYNE3-203ENST00000554873 STN1Q9H668 368 aaKnown RBP16.09■□□□□ 0.17
SYNE3-203ENST00000554873 IKBKGQ9Y6K9 419 aa16.09■□□□□ 0.17
SYNE3-203ENST00000554873 PTPRJQ12913 1337 aa16.09■□□□□ 0.17
SYNE3-203ENST00000554873 TESPA1A2RU30 521 aaPredicted RBP16.09■□□□□ 0.17
SYNE3-203ENST00000554873 KRBA1A5PL33 1030 aa16.09■□□□□ 0.17
SYNE3-203ENST00000554873 GOLGA8SH3BPF8 625 aa16.09■□□□□ 0.17
SYNE3-203ENST00000554873 GOLGA8MH3BSY2 632 aa16.09■□□□□ 0.17
SYNE3-203ENST00000554873 SNNO75324 88 aaPredicted RBP16.09■□□□□ 0.17
SYNE3-203ENST00000554873 ENPEPQ07075 957 aa16.09■□□□□ 0.17
SYNE3-203ENST00000554873 DRICH1Q6PGQ1 229 aaPredicted RBP16.09■□□□□ 0.17
SYNE3-203ENST00000554873 XKR5Q6UX68 686 aa16.09■□□□□ 0.17
SYNE3-203ENST00000554873 TRIM72Q6ZMU5 477 aa16.09■□□□□ 0.17
SYNE3-203ENST00000554873 RMND5BQ96G75 393 aaPredicted RBP16.09■□□□□ 0.17
SYNE3-203ENST00000554873 WRNIP1Q96S55 665 aa16.09■□□□□ 0.17
SYNE3-203ENST00000554873 COPS7BQ9H9Q2 264 aaPredicted RBP16.09■□□□□ 0.17
SYNE3-203ENST00000554873 ERVK-11Q9UQG0 969 aa16.09■□□□□ 0.17
SYNE3-203ENST00000554873 CCDC195A0A1B0GUA6 201 aa16.08■□□□□ 0.16
SYNE3-203ENST00000554873 EXTL3O43909 919 aa16.08■□□□□ 0.16
SYNE3-203ENST00000554873 STBD1O95210 358 aa16.08■□□□□ 0.16
SYNE3-203ENST00000554873 ACOT2P49753 483 aa16.08■□□□□ 0.16
SYNE3-203ENST00000554873 FAAP100Q0VG06 881 aa16.08■□□□□ 0.16
SYNE3-203ENST00000554873 CUL2Q13617 745 aa16.08■□□□□ 0.16
SYNE3-203ENST00000554873 CDHR3Q6ZTQ4 885 aa16.08■□□□□ 0.16
SYNE3-203ENST00000554873 VASH1Q7L8A9 365 aaPredicted RBP16.08■□□□□ 0.16
SYNE3-203ENST00000554873 KRT27Q7Z3Y8 459 aa16.08■□□□□ 0.16
SYNE3-203ENST00000554873 NUDCD3Q8IVD9 361 aa16.08■□□□□ 0.16
SYNE3-203ENST00000554873 PALM2Q8IXS6 379 aa16.08■□□□□ 0.16
SYNE3-203ENST00000554873 TAMM41Q96BW9 452 aa16.08■□□□□ 0.16
SYNE3-203ENST00000554873 OTUD5Q96G74 571 aa16.08■□□□□ 0.16
SYNE3-203ENST00000554873 RMDN3Q96TC7 470 aa16.08■□□□□ 0.16
SYNE3-203ENST00000554873 SENP7Q9BQF6 1050 aa16.08■□□□□ 0.16
SYNE3-203ENST00000554873 ZNF341Q9BYN7 854 aa16.08■□□□□ 0.16
SYNE3-203ENST00000554873 PNPLA3Q9NST1 481 aa16.08■□□□□ 0.16
SYNE3-203ENST00000554873 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.08■□□□□ 0.16
SYNE3-203ENST00000554873 GABBR1Q9UBS5 961 aa16.08■□□□□ 0.16
SYNE3-203ENST00000554873 STK39Q9UEW8 545 aa16.08■□□□□ 0.16
SYNE3-203ENST00000554873 APOBEC2Q9Y235 224 aaKnown RBP16.08■□□□□ 0.16
SYNE3-203ENST00000554873 PCDHA10Q9Y5I2 948 aa16.08■□□□□ 0.16
SYNE3-203ENST00000554873 IVNS1ABPQ9Y6Y0 642 aa16.08■□□□□ 0.16
SYNE3-203ENST00000554873 CFAP99D6REC4 459 aa16.08■□□□□ 0.16
SYNE3-203ENST00000554873 ATE1O95260 518 aa16.08■□□□□ 0.16
SYNE3-203ENST00000554873 NLRP11P59045 1033 aaKnown RBP16.08■□□□□ 0.16
SYNE3-203ENST00000554873 CTBSQ01459 385 aa16.08■□□□□ 0.16
SYNE3-203ENST00000554873 TRIM16LQ309B1 348 aa16.08■□□□□ 0.16
SYNE3-203ENST00000554873 GRIN3AQ8TCU5 1115 aa16.08■□□□□ 0.16
SYNE3-203ENST00000554873 TRUB1Q8WWH5 349 aaKnown RBP16.08■□□□□ 0.16
SYNE3-203ENST00000554873 SH3GL1Q99961 368 aa16.08■□□□□ 0.16
SYNE3-203ENST00000554873 FERMT1Q9BQL6 677 aa16.08■□□□□ 0.16
SYNE3-203ENST00000554873 PDCD2LQ9BRP1 358 aa16.08■□□□□ 0.16
SYNE3-203ENST00000554873 TDRD1Q9BXT4 1180 aaKnown RBP16.08■□□□□ 0.16
SYNE3-203ENST00000554873 XPNPEP1Q9NQW7 623 aa16.08■□□□□ 0.16
SYNE3-203ENST00000554873 PDLIM7Q9NR12 457 aa16.08■□□□□ 0.16
SYNE3-203ENST00000554873 PARVAQ9NVD7 372 aa16.08■□□□□ 0.16
SYNE3-203ENST00000554873 IP6K2Q9UHH9 426 aa16.08■□□□□ 0.16
SYNE3-203ENST00000554873 DRG1Q9Y295 367 aaKnown RBP16.08■□□□□ 0.16
SYNE3-203ENST00000554873 PLLPQ9Y342 182 aa16.08■□□□□ 0.16
SYNE3-203ENST00000554873 ARHGEF37A1IGU5 675 aa16.07■□□□□ 0.16
SYNE3-203ENST00000554873 H0YIN7 160 aa16.07■□□□□ 0.16
SYNE3-203ENST00000554873 TNFRSF10AO00220 468 aa16.07■□□□□ 0.16
SYNE3-203ENST00000554873 KPNA4O00629 521 aaPredicted RBP16.07■□□□□ 0.16
SYNE3-203ENST00000554873 JAK1P23458 1154 aa16.07■□□□□ 0.16
SYNE3-203ENST00000554873 L1CAMP32004 1257 aa16.07■□□□□ 0.16
SYNE3-203ENST00000554873 BMXP51813 675 aa16.07■□□□□ 0.16
SYNE3-203ENST00000554873 MRPS22P82650 360 aaKnown RBP16.07■□□□□ 0.16
SYNE3-203ENST00000554873 C1QBPQ07021 282 aaKnown RBP16.07■□□□□ 0.16
SYNE3-203ENST00000554873 FAM209AQ5JX71 171 aa16.07■□□□□ 0.16
SYNE3-203ENST00000554873 TXNRD3NBQ6F5E7 133 aa16.07■□□□□ 0.16
SYNE3-203ENST00000554873 IFNLR1Q8IU57 520 aaPredicted RBP16.07■□□□□ 0.16
SYNE3-203ENST00000554873 WDR75Q8IWA0 830 aaKnown RBP16.07■□□□□ 0.16
SYNE3-203ENST00000554873 FBXO36Q8NEA4 188 aa16.07■□□□□ 0.16
SYNE3-203ENST00000554873 ATP2A3Q93084 1043 aa16.07■□□□□ 0.16
SYNE3-203ENST00000554873 ANLNQ9NQW6 1124 aa16.07■□□□□ 0.16
SYNE3-203ENST00000554873 ANKRD34BA5PLL1 514 aa16.07■□□□□ 0.16
SYNE3-203ENST00000554873 TMEM191CA6NGB0 347 aa16.07■□□□□ 0.16
SYNE3-203ENST00000554873 F8VP50 259 aa16.07■□□□□ 0.16
SYNE3-203ENST00000554873 H0YJX3 145 aa16.07■□□□□ 0.16
SYNE3-203ENST00000554873 KRT1P04264 644 aa16.07■□□□□ 0.16
SYNE3-203ENST00000554873 INHBAP08476 426 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms