RNA–Protein interactions for RNA: ENST00000554808.1

LINC01397-201, Transcript of long intergenic non-protein coding RNA 1397, humanhuman

TSL 4 BASIC

Gene LINC01397, Length 579 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01397-201ENST00000554808 SLFN11Q7Z7L1 901 aa8.35□□□□□ -1.07
LINC01397-201ENST00000554808 VSIG1Q86XK7 387 aa8.35□□□□□ -1.07
LINC01397-201ENST00000554808 DENND1CQ8IV53 801 aa8.35□□□□□ -1.07
LINC01397-201ENST00000554808 CCDC117Q8IWD4 279 aaPredicted RBP8.35□□□□□ -1.07
LINC01397-201ENST00000554808 SUGP1Q8IWZ8 645 aaKnown RBP8.35□□□□□ -1.07
LINC01397-201ENST00000554808 GJD3Q8N144 294 aa8.35□□□□□ -1.07
LINC01397-201ENST00000554808 SLC44A3Q8N4M1 653 aa8.35□□□□□ -1.07
LINC01397-201ENST00000554808 ADAM32Q8TC27 787 aa8.35□□□□□ -1.07
LINC01397-201ENST00000554808 TRIM44Q96DX7 344 aaPredicted RBP8.35□□□□□ -1.07
LINC01397-201ENST00000554808 FAM83CQ9BQN1 747 aa8.35□□□□□ -1.07
LINC01397-201ENST00000554808 TKTL2Q9H0I9 626 aa8.35□□□□□ -1.07
LINC01397-201ENST00000554808 OSBPL2Q9H1P3 480 aa8.35□□□□□ -1.07
LINC01397-201ENST00000554808 C8orf33Q9H7E9 229 aaPredicted RBP8.35□□□□□ -1.07
LINC01397-201ENST00000554808 SPHK2Q9NRA0 654 aa8.35□□□□□ -1.07
LINC01397-201ENST00000554808 GKN1Q9NS71 199 aa8.35□□□□□ -1.07
LINC01397-201ENST00000554808 MARK1Q9P0L2 795 aa8.35□□□□□ -1.07
LINC01397-201ENST00000554808 COX16Q9P0S2 106 aa8.35□□□□□ -1.07
LINC01397-201ENST00000554808 AGO1Q9UL18 857 aaKnown RBP8.35□□□□□ -1.07
LINC01397-201ENST00000554808 USP18Q9UMW8 372 aa8.35□□□□□ -1.07
LINC01397-201ENST00000554808 PPP2R2CQ9Y2T4 447 aa8.35□□□□□ -1.07
LINC01397-201ENST00000554808 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.35□□□□□ -1.07
LINC01397-201ENST00000554808 REXO2Q9Y3B8 237 aaKnown RBP8.35□□□□□ -1.07
LINC01397-201ENST00000554808 MIF4GDA9UHW6 222 aaKnown RBP8.34□□□□□ -1.07
LINC01397-201ENST00000554808 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.34□□□□□ -1.07
LINC01397-201ENST00000554808 PSTPIP1O43586 416 aa8.34□□□□□ -1.07
LINC01397-201ENST00000554808 SPOPO43791 374 aa8.34□□□□□ -1.07
LINC01397-201ENST00000554808 GREM1O60565 184 aa8.34□□□□□ -1.07
LINC01397-201ENST00000554808 GPR37L1O60883 481 aa8.34□□□□□ -1.07
LINC01397-201ENST00000554808 LRCH4O75427 683 aa8.34□□□□□ -1.07
LINC01397-201ENST00000554808 GJB6O95452 261 aa8.34□□□□□ -1.07
LINC01397-201ENST00000554808 HMBSP08397 361 aa8.34□□□□□ -1.07
LINC01397-201ENST00000554808 ADRA1BP35368 520 aa8.34□□□□□ -1.07
LINC01397-201ENST00000554808 OXCT1P55809 520 aa8.34□□□□□ -1.07
LINC01397-201ENST00000554808 PITX1P78337 314 aaPredicted RBP8.34□□□□□ -1.07
LINC01397-201ENST00000554808 ZXDBP98169 803 aa8.34□□□□□ -1.07
LINC01397-201ENST00000554808 OGDHQ02218 1023 aa8.34□□□□□ -1.07
LINC01397-201ENST00000554808 ZNF252P-AS1Q0IIN9 211 aa8.34□□□□□ -1.07
LINC01397-201ENST00000554808 RUNX3Q13761 415 aa8.34□□□□□ -1.07
LINC01397-201ENST00000554808 MESDQ14696 234 aa8.34□□□□□ -1.07
LINC01397-201ENST00000554808 ODF2Q5BJF6 829 aa8.34□□□□□ -1.07
LINC01397-201ENST00000554808 ZC3H12AQ5D1E8 599 aaKnown RBP8.34□□□□□ -1.07
LINC01397-201ENST00000554808 LRRC38Q5VT99 294 aa8.34□□□□□ -1.07
LINC01397-201ENST00000554808 POTEHQ6S545 545 aa8.34□□□□□ -1.07
LINC01397-201ENST00000554808 PHLDB2Q86SQ0 1253 aa8.34□□□□□ -1.07
LINC01397-201ENST00000554808 DAAM2Q86T65 1068 aa8.34□□□□□ -1.07
LINC01397-201ENST00000554808 RALGPS2Q86X27 583 aaPredicted RBP8.34□□□□□ -1.07
LINC01397-201ENST00000554808 CHSY1Q86X52 802 aa8.34□□□□□ -1.07
LINC01397-201ENST00000554808 FAM131BQ86XD5 332 aa8.34□□□□□ -1.07
LINC01397-201ENST00000554808 DNAAF5Q86Y56 855 aa8.34□□□□□ -1.07
LINC01397-201ENST00000554808 RNF135Q8IUD6 432 aa8.34□□□□□ -1.07
LINC01397-201ENST00000554808 MAP7D3Q8IWC1 876 aa8.34□□□□□ -1.07
LINC01397-201ENST00000554808 BBS7Q8IWZ6 715 aa8.34□□□□□ -1.07
LINC01397-201ENST00000554808 ADGRG2Q8IZP9 1017 aa8.34□□□□□ -1.07
LINC01397-201ENST00000554808 HJURPQ8NCD3 748 aaPredicted RBP8.34□□□□□ -1.07
LINC01397-201ENST00000554808 TRIM58Q8NG06 486 aa8.34□□□□□ -1.07
LINC01397-201ENST00000554808 TPCN2Q8NHX9 752 aa8.34□□□□□ -1.07
LINC01397-201ENST00000554808 CCDC26Q8TAB7 109 aa8.34□□□□□ -1.07
LINC01397-201ENST00000554808 KIAA1524Q8TCG1 905 aa8.34□□□□□ -1.07
LINC01397-201ENST00000554808 SHDQ96IW2 340 aa8.34□□□□□ -1.07
LINC01397-201ENST00000554808 XPO6Q96QU8 1125 aaKnown RBP8.34□□□□□ -1.07
LINC01397-201ENST00000554808 EPAS1Q99814 870 aa8.34□□□□□ -1.07
LINC01397-201ENST00000554808 DESI2Q9BSY9 194 aa8.34□□□□□ -1.07
LINC01397-201ENST00000554808 SLC2A11Q9BYW1 496 aa8.34□□□□□ -1.07
LINC01397-201ENST00000554808 SMG9Q9H0W8 520 aaKnown RBP8.34□□□□□ -1.07
LINC01397-201ENST00000554808 ECT2Q9H8V3 914 aa8.34□□□□□ -1.07
LINC01397-201ENST00000554808 ZWILCHQ9H900 591 aa8.34□□□□□ -1.07
LINC01397-201ENST00000554808 PRDM16Q9HAZ2 1276 aa8.34□□□□□ -1.07
LINC01397-201ENST00000554808 OSGEPQ9NPF4 335 aa8.34□□□□□ -1.07
LINC01397-201ENST00000554808 DDX56Q9NY93 547 aaKnown RBP8.34□□□□□ -1.07
LINC01397-201ENST00000554808 RCOR3Q9P2K3 495 aaPredicted RBP8.34□□□□□ -1.07
LINC01397-201ENST00000554808 PPARGC1AQ9UBK2 798 aaKnown RBP8.34□□□□□ -1.07
LINC01397-201ENST00000554808 WNT16Q9UBV4 365 aa8.34□□□□□ -1.07
LINC01397-201ENST00000554808 FZD10Q9ULW2 581 aa8.34□□□□□ -1.07
LINC01397-201ENST00000554808 AP4E1Q9UPM8 1137 aa8.34□□□□□ -1.07
LINC01397-201ENST00000554808 MUC22E2RYF6 1773 aaPredicted RBP8.34□□□□□ -1.07
LINC01397-201ENST00000554808 PLXND1Q9Y4D7 1925 aa8.34□□□□□ -1.07
LINC01397-201ENST00000554808 MYO15AQ9UKN7 3530 aa8.34□□□□□ -1.07
LINC01397-201ENST00000554808 TECTAO75443 2155 aa8.34□□□□□ -1.08
LINC01397-201ENST00000554808 CFAP54Q96N23 3096 aa8.33□□□□□ -1.08
LINC01397-201ENST00000554808 F5P12259 2224 aa8.33□□□□□ -1.08
LINC01397-201ENST00000554808 A0A1B0GVM2 712 aa8.33□□□□□ -1.08
LINC01397-201ENST00000554808 FAM170AA1A519 330 aa8.33□□□□□ -1.08
LINC01397-201ENST00000554808 CCDC66A2RUB6 948 aa8.33□□□□□ -1.08
LINC01397-201ENST00000554808 TCAF2A6NFQ2 919 aa8.33□□□□□ -1.08
LINC01397-201ENST00000554808 ZNF487B1APH4 448 aa8.33□□□□□ -1.08
LINC01397-201ENST00000554808 ARNTLO00327 626 aa8.33□□□□□ -1.08
LINC01397-201ENST00000554808 MAN2B1O00754 1011 aa8.33□□□□□ -1.08
LINC01397-201ENST00000554808 FGF10O15520 208 aaPredicted RBP8.33□□□□□ -1.08
LINC01397-201ENST00000554808 HOXC11O43248 304 aaPredicted RBP8.33□□□□□ -1.08
LINC01397-201ENST00000554808 PAGE1O75459 146 aa8.33□□□□□ -1.08
LINC01397-201ENST00000554808 MOCS2O96007 188 aaPredicted RBP8.33□□□□□ -1.08
LINC01397-201ENST00000554808 KLKB1P03952 638 aa8.33□□□□□ -1.08
LINC01397-201ENST00000554808 ADH5P11766 374 aa8.33□□□□□ -1.08
LINC01397-201ENST00000554808 ALADP13716 330 aa8.33□□□□□ -1.08
LINC01397-201ENST00000554808 TFE3P19532 575 aaPredicted RBP8.33□□□□□ -1.08
LINC01397-201ENST00000554808 TACR2P21452 398 aa8.33□□□□□ -1.08
LINC01397-201ENST00000554808 MIPP30301 263 aa8.33□□□□□ -1.08
LINC01397-201ENST00000554808 L1CAMP32004 1257 aa8.33□□□□□ -1.08
LINC01397-201ENST00000554808 ETFBP38117 255 aa8.33□□□□□ -1.08
LINC01397-201ENST00000554808 ARL4AP40617 200 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms