RNA–Protein interactions for RNA: ENST00000554685.2

SHOX2-206, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-206ENST00000554685 ADGRE1Q14246 886 aa14.86□□□□□ -0.03
SHOX2-206ENST00000554685 CA9Q16790 459 aa14.86□□□□□ -0.03
SHOX2-206ENST00000554685 SLC5A9Q2M3M2 681 aa14.86□□□□□ -0.03
SHOX2-206ENST00000554685 CTC1Q2NKJ3 1217 aa14.86□□□□□ -0.03
SHOX2-206ENST00000554685 ANKRD20A8PQ5CZ79 823 aa14.86□□□□□ -0.03
SHOX2-206ENST00000554685 ATAT1Q5SQI0 421 aa14.86□□□□□ -0.03
SHOX2-206ENST00000554685 SYCE2Q6PIF2 218 aa14.86□□□□□ -0.03
SHOX2-206ENST00000554685 CTAGE6Q86UF2 777 aa14.86□□□□□ -0.03
SHOX2-206ENST00000554685 CTAGE4Q8IX94 777 aa14.86□□□□□ -0.03
SHOX2-206ENST00000554685 CMTM8Q8IZV2 173 aa14.86□□□□□ -0.03
SHOX2-206ENST00000554685 TSC1Q92574 1164 aa14.86□□□□□ -0.03
SHOX2-206ENST00000554685 TBC1D31Q96DN5 1066 aa14.86□□□□□ -0.03
SHOX2-206ENST00000554685 PABPC5Q96DU9 382 aaKnown RBP14.86□□□□□ -0.03
SHOX2-206ENST00000554685 TCEAL4Q96EI5 215 aa14.86□□□□□ -0.03
SHOX2-206ENST00000554685 MS4A14Q96JA4 679 aa14.86□□□□□ -0.03
SHOX2-206ENST00000554685 CSPG4P5Q96PW8 444 aa14.86□□□□□ -0.03
SHOX2-206ENST00000554685 RNF157Q96PX1 679 aa14.86□□□□□ -0.03
SHOX2-206ENST00000554685 SLC46A2Q9BY10 475 aa14.86□□□□□ -0.03
SHOX2-206ENST00000554685 FRMD8P1Q9BZ68 369 aaPredicted RBP14.86□□□□□ -0.03
SHOX2-206ENST00000554685 ADAM7Q9H2U9 754 aa14.86□□□□□ -0.03
SHOX2-206ENST00000554685 KIF9Q9HAQ2 790 aa14.86□□□□□ -0.03
SHOX2-206ENST00000554685 MTMR10Q9NXD2 777 aa14.86□□□□□ -0.03
SHOX2-206ENST00000554685 CLDND1Q9NY35 253 aa14.86□□□□□ -0.03
SHOX2-206ENST00000554685 SH3BP1Q9Y3L3 701 aa14.86□□□□□ -0.03
SHOX2-206ENST00000554685 KRIT1O00522 736 aa14.85□□□□□ -0.03
SHOX2-206ENST00000554685 APOL1O14791 398 aa14.85□□□□□ -0.03
SHOX2-206ENST00000554685 FGF10O15520 208 aaPredicted RBP14.85□□□□□ -0.03
SHOX2-206ENST00000554685 CD48P09326 243 aa14.85□□□□□ -0.03
SHOX2-206ENST00000554685 IRF1P10914 325 aa14.85□□□□□ -0.03
SHOX2-206ENST00000554685 TCF3P15923 654 aa14.85□□□□□ -0.03
SHOX2-206ENST00000554685 CEBPBP17676 345 aa14.85□□□□□ -0.03
SHOX2-206ENST00000554685 CORO1AP31146 461 aaKnown RBP14.85□□□□□ -0.03
SHOX2-206ENST00000554685 COL19A1Q14993 1142 aa14.85□□□□□ -0.03
SHOX2-206ENST00000554685 KAZNQ674X7 775 aa14.85□□□□□ -0.03
SHOX2-206ENST00000554685 AADACL2Q6P093 401 aa14.85□□□□□ -0.03
SHOX2-206ENST00000554685 RFX8Q6ZV50 586 aa14.85□□□□□ -0.03
SHOX2-206ENST00000554685 BBS12Q6ZW61 710 aa14.85□□□□□ -0.03
SHOX2-206ENST00000554685 BZW1Q7L1Q6 419 aaKnown RBP14.85□□□□□ -0.03
SHOX2-206ENST00000554685 CHSY1Q86X52 802 aa14.85□□□□□ -0.03
SHOX2-206ENST00000554685 KIAA1958Q8N8K9 716 aa14.85□□□□□ -0.03
SHOX2-206ENST00000554685 ZFRQ96KR1 1074 aaKnown RBP14.85□□□□□ -0.03
SHOX2-206ENST00000554685 RUNDC3BQ96NL0 473 aa14.85□□□□□ -0.03
SHOX2-206ENST00000554685 SLC22A12Q96S37 553 aa14.85□□□□□ -0.03
SHOX2-206ENST00000554685 CYP2S1Q96SQ9 504 aa14.85□□□□□ -0.03
SHOX2-206ENST00000554685 CARD6Q9BX69 1037 aa14.85□□□□□ -0.03
SHOX2-206ENST00000554685 HEMGNQ9BXL5 484 aa14.85□□□□□ -0.03
SHOX2-206ENST00000554685 SIK2Q9H0K1 926 aa14.85□□□□□ -0.03
SHOX2-206ENST00000554685 RETREG1Q9H6L5 497 aa14.85□□□□□ -0.03
SHOX2-206ENST00000554685 CATSPERBQ9H7T0 1116 aa14.85□□□□□ -0.03
SHOX2-206ENST00000554685 ANLNQ9NQW6 1124 aa14.85□□□□□ -0.03
SHOX2-206ENST00000554685 SMPD4Q9NXE4 827 aa14.85□□□□□ -0.03
SHOX2-206ENST00000554685 CWC15Q9P013 229 aaKnown RBP14.85□□□□□ -0.03
SHOX2-206ENST00000554685 HS3ST4Q9Y661 456 aa14.85□□□□□ -0.03
SHOX2-206ENST00000554685 E2F8A0AVK6 867 aa14.84□□□□□ -0.03
SHOX2-206ENST00000554685 F5H5T6 163 aa14.84□□□□□ -0.03
SHOX2-206ENST00000554685 I6L893 689 aaPredicted RBP14.84□□□□□ -0.03
SHOX2-206ENST00000554685 CST8O60676 142 aa14.84□□□□□ -0.03
SHOX2-206ENST00000554685 LRIG2O94898 1065 aa14.84□□□□□ -0.03
SHOX2-206ENST00000554685 SLU7O95391 586 aaKnown RBP14.84□□□□□ -0.03
SHOX2-206ENST00000554685 KRT10P13645 584 aa14.84□□□□□ -0.03
SHOX2-206ENST00000554685 GOT1P17174 413 aa14.84□□□□□ -0.03
SHOX2-206ENST00000554685 TGM2P21980 687 aa14.84□□□□□ -0.03
SHOX2-206ENST00000554685 EPHB2P29323 1055 aa14.84□□□□□ -0.03
SHOX2-206ENST00000554685 KCNQ1P51787 676 aa14.84□□□□□ -0.03
SHOX2-206ENST00000554685 KLF1Q13351 362 aaPredicted RBP14.84□□□□□ -0.03
SHOX2-206ENST00000554685 MS4A13Q5J8X5 152 aa14.84□□□□□ -0.03
SHOX2-206ENST00000554685 RABGAP1LQ5R372 815 aa14.84□□□□□ -0.03
SHOX2-206ENST00000554685 STXBP5Q5T5C0 1151 aa14.84□□□□□ -0.03
SHOX2-206ENST00000554685 PIK3R6Q5UE93 754 aa14.84□□□□□ -0.03
SHOX2-206ENST00000554685 EP400NLQ6ZTU2 488 aa14.84□□□□□ -0.03
SHOX2-206ENST00000554685 PYROXD2Q8N2H3 581 aa14.84□□□□□ -0.03
SHOX2-206ENST00000554685 MICALL1Q8N3F8 863 aa14.84□□□□□ -0.03
SHOX2-206ENST00000554685 LRCH3Q96II8 777 aa14.84□□□□□ -0.03
SHOX2-206ENST00000554685 NECTIN4Q96NY8 510 aa14.84□□□□□ -0.03
SHOX2-206ENST00000554685 TMPRSS4Q9NRS4 437 aa14.84□□□□□ -0.03
SHOX2-206ENST00000554685 GKN1Q9NS71 199 aa14.84□□□□□ -0.03
SHOX2-206ENST00000554685 TDP1Q9NUW8 608 aa14.84□□□□□ -0.03
SHOX2-206ENST00000554685 GDE1Q9NZC3 331 aa14.84□□□□□ -0.03
SHOX2-206ENST00000554685 CLEC1BQ9P126 229 aa14.84□□□□□ -0.03
SHOX2-206ENST00000554685 PPARGC1AQ9UBK2 798 aaKnown RBP14.84□□□□□ -0.03
SHOX2-206ENST00000554685 TRANK1O15050 2925 aa14.84□□□□□ -0.03
SHOX2-206ENST00000554685 TYW5A2RUC4 315 aaKnown RBP14.83□□□□□ -0.04
SHOX2-206ENST00000554685 E9PAM4 449 aa14.83□□□□□ -0.04
SHOX2-206ENST00000554685 APOC4-APOC2K7ER74 178 aa14.83□□□□□ -0.04
SHOX2-206ENST00000554685 LEFTY2O00292 366 aa14.83□□□□□ -0.04
SHOX2-206ENST00000554685 PDE2AO00408 941 aaPredicted RBP14.83□□□□□ -0.04
SHOX2-206ENST00000554685 TBX10O75333 385 aa14.83□□□□□ -0.04
SHOX2-206ENST00000554685 ZNF189O75820 626 aaPredicted RBP14.83□□□□□ -0.04
SHOX2-206ENST00000554685 APOC2P02655 101 aa14.83□□□□□ -0.04
SHOX2-206ENST00000554685 TACR2P21452 398 aa14.83□□□□□ -0.04
SHOX2-206ENST00000554685 IL4RP24394 825 aa14.83□□□□□ -0.04
SHOX2-206ENST00000554685 HOXC13P31276 330 aa14.83□□□□□ -0.04
SHOX2-206ENST00000554685 SERPINB6P35237 376 aa14.83□□□□□ -0.04
SHOX2-206ENST00000554685 MMRN1Q13201 1228 aa14.83□□□□□ -0.04
SHOX2-206ENST00000554685 AUHQ13825 339 aaKnown RBP14.83□□□□□ -0.04
SHOX2-206ENST00000554685 DPYSQ14117 519 aa14.83□□□□□ -0.04
SHOX2-206ENST00000554685 ADGRF1Q5T601 910 aa14.83□□□□□ -0.04
SHOX2-206ENST00000554685 MANEALQ5VSG8 457 aa14.83□□□□□ -0.04
SHOX2-206ENST00000554685 TTC39BQ5VTQ0 682 aaPredicted RBP14.83□□□□□ -0.04
SHOX2-206ENST00000554685 RAP1GAP2Q684P5 730 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms