RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 FOXO1Q12778 655 aa5.74□□□□□ -1.49
SCFD1-211ENST00000554437 SRSF7Q16629 238 aaKnown RBP eCLIP5.74□□□□□ -1.49
SCFD1-211ENST00000554437 FAM110CQ1W6H9 321 aa5.74□□□□□ -1.49
SCFD1-211ENST00000554437 LIN54Q6MZP7 749 aa5.74□□□□□ -1.49
SCFD1-211ENST00000554437 SLC18B1Q6NT16 456 aa5.74□□□□□ -1.49
SCFD1-211ENST00000554437 ERAP2Q6P179 960 aa5.74□□□□□ -1.49
SCFD1-211ENST00000554437 NFRKBQ6P4R8 1299 aa5.74□□□□□ -1.49
SCFD1-211ENST00000554437 RAB11FIP2Q7L804 512 aa5.74□□□□□ -1.49
SCFD1-211ENST00000554437 SCAMP5Q8TAC9 235 aa5.74□□□□□ -1.49
SCFD1-211ENST00000554437 MAP4K1Q92918 833 aa5.74□□□□□ -1.49
SCFD1-211ENST00000554437 FAM118BQ9BPY3 351 aa5.74□□□□□ -1.49
SCFD1-211ENST00000554437 MECRQ9BV79 373 aa5.74□□□□□ -1.49
SCFD1-211ENST00000554437 SORBS1Q9BX66 1292 aaKnown RBP5.74□□□□□ -1.49
SCFD1-211ENST00000554437 PABPC3Q9H361 631 aaKnown RBP5.74□□□□□ -1.49
SCFD1-211ENST00000554437 MLXIPQ9HAP2 919 aa5.74□□□□□ -1.49
SCFD1-211ENST00000554437 KLHL13Q9P2N7 655 aa5.74□□□□□ -1.49
SCFD1-211ENST00000554437 TRPC5Q9UL62 973 aaPredicted RBP5.74□□□□□ -1.49
SCFD1-211ENST00000554437 DAPP1Q9UN19 280 aa5.74□□□□□ -1.49
SCFD1-211ENST00000554437 SLC12A4Q9UP95 1085 aa5.74□□□□□ -1.49
SCFD1-211ENST00000554437 ZBTB1Q9Y2K1 713 aa5.74□□□□□ -1.49
SCFD1-211ENST00000554437 SMIM35A0A1B0GVV1 85 aa5.73□□□□□ -1.49
SCFD1-211ENST00000554437 EFCAB8A8MWE9 144 aa5.73□□□□□ -1.49
SCFD1-211ENST00000554437 NBNO60934 754 aa5.73□□□□□ -1.49
SCFD1-211ENST00000554437 EIF3JO75822 258 aaKnown RBP5.73□□□□□ -1.49
SCFD1-211ENST00000554437 GRK5P34947 590 aa5.73□□□□□ -1.49
SCFD1-211ENST00000554437 PNLIPRP1P54315 467 aa5.73□□□□□ -1.49
SCFD1-211ENST00000554437 RPL15P61313 204 aaKnown RBP5.73□□□□□ -1.49
SCFD1-211ENST00000554437 YPEL5P62699 121 aa5.73□□□□□ -1.49
SCFD1-211ENST00000554437 RPS6KA2Q15349 733 aa5.73□□□□□ -1.49
SCFD1-211ENST00000554437 TIGD6Q17RP2 521 aa5.73□□□□□ -1.49
SCFD1-211ENST00000554437 SUPT20HL1Q3ZLR7 823 aa5.73□□□□□ -1.49
SCFD1-211ENST00000554437 TRIM60Q495X7 471 aa5.73□□□□□ -1.49
SCFD1-211ENST00000554437 TFAP2DQ7Z6R9 452 aa5.73□□□□□ -1.49
SCFD1-211ENST00000554437 SMC5Q8IY18 1101 aa5.73□□□□□ -1.49
SCFD1-211ENST00000554437 SRRM1Q8IYB3 904 aaKnown RBP5.73□□□□□ -1.49
SCFD1-211ENST00000554437 LAS2Q8IYD9 372 aa5.73□□□□□ -1.49
SCFD1-211ENST00000554437 SRFBP1Q8NEF9 429 aaKnown RBP5.73□□□□□ -1.49
SCFD1-211ENST00000554437 STT3BQ8TCJ2 826 aa5.73□□□□□ -1.49
SCFD1-211ENST00000554437 OTUD7AQ8TE49 926 aaPredicted RBP5.73□□□□□ -1.49
SCFD1-211ENST00000554437 ASB12Q8WXK4 309 aa5.73□□□□□ -1.49
SCFD1-211ENST00000554437 CCT6BQ92526 530 aa5.73□□□□□ -1.49
SCFD1-211ENST00000554437 CELF1Q92879 486 aaKnown RBP5.73□□□□□ -1.49
SCFD1-211ENST00000554437 TRMT61AQ96FX7 289 aaKnown RBP5.73□□□□□ -1.49
SCFD1-211ENST00000554437 ZNF845Q96IR2 970 aaPredicted RBP5.73□□□□□ -1.49
SCFD1-211ENST00000554437 TRIM2Q9C040 744 aa5.73□□□□□ -1.49
SCFD1-211ENST00000554437 VPS16Q9H269 839 aa5.73□□□□□ -1.49
SCFD1-211ENST00000554437 ELAC1Q9H777 363 aaKnown RBP5.73□□□□□ -1.49
SCFD1-211ENST00000554437 PRDM8Q9NQV8 689 aa5.73□□□□□ -1.49
SCFD1-211ENST00000554437 TBC1D3DA0A087WVF3 549 aa5.72□□□□□ -1.49
SCFD1-211ENST00000554437 TBC1D3IA0A087WXS9 549 aa5.72□□□□□ -1.49
SCFD1-211ENST00000554437 TBC1D3EA0A087X179 549 aa5.72□□□□□ -1.49
SCFD1-211ENST00000554437 TBC1D3KA0A087X1G2 549 aa5.72□□□□□ -1.49
SCFD1-211ENST00000554437 TBC1D3BA6NDS4 549 aa5.72□□□□□ -1.49
SCFD1-211ENST00000554437 TBC1D3FA6NER0 549 aaPredicted RBP5.72□□□□□ -1.49
SCFD1-211ENST00000554437 HMX3A6NHT5 357 aa5.72□□□□□ -1.49
SCFD1-211ENST00000554437 TBC1D3LB9A6J9 549 aa5.72□□□□□ -1.49
SCFD1-211ENST00000554437 IFRD1O00458 451 aaPredicted RBP5.72□□□□□ -1.49
SCFD1-211ENST00000554437 RRHO14718 337 aa5.72□□□□□ -1.49
SCFD1-211ENST00000554437 TBC1D3HP0C7X1 549 aa5.72□□□□□ -1.49
SCFD1-211ENST00000554437 PRR35P0CG20 571 aa5.72□□□□□ -1.49
SCFD1-211ENST00000554437 SFPQP23246 707 aaKnown RBP eCLIP5.72□□□□□ -1.49
SCFD1-211ENST00000554437 KELP23276 732 aa5.72□□□□□ -1.49
SCFD1-211ENST00000554437 ABCG1P45844 678 aa5.72□□□□□ -1.49
SCFD1-211ENST00000554437 ZNF84P51523 738 aa5.72□□□□□ -1.49
SCFD1-211ENST00000554437 RBM6P78332 1123 aaKnown RBP5.72□□□□□ -1.49
SCFD1-211ENST00000554437 EZH2Q15910 746 aaKnown RBP5.72□□□□□ -1.49
SCFD1-211ENST00000554437 GLE1Q53GS7 698 aaKnown RBP5.72□□□□□ -1.49
SCFD1-211ENST00000554437 MEX3CQ5U5Q3 659 aaKnown RBP5.72□□□□□ -1.49
SCFD1-211ENST00000554437 ANO1Q5XXA6 986 aa5.72□□□□□ -1.49
SCFD1-211ENST00000554437 TBC1D3GQ6DHY5 549 aa5.72□□□□□ -1.49
SCFD1-211ENST00000554437 TANGO2Q6ICL3 276 aa5.72□□□□□ -1.49
SCFD1-211ENST00000554437 TBC1D3CQ6IPX1 549 aa5.72□□□□□ -1.49
SCFD1-211ENST00000554437 NEK8Q86SG6 692 aa5.72□□□□□ -1.49
SCFD1-211ENST00000554437 UEVLDQ8IX04 471 aa5.72□□□□□ -1.49
SCFD1-211ENST00000554437 TBC1D3Q8IZP1 549 aaPredicted RBP5.72□□□□□ -1.49
SCFD1-211ENST00000554437 RUBCNQ92622 972 aa5.72□□□□□ -1.49
SCFD1-211ENST00000554437 PIGKQ92643 395 aa5.72□□□□□ -1.49
SCFD1-211ENST00000554437 C3orf49Q96BT1 292 aa5.72□□□□□ -1.49
SCFD1-211ENST00000554437 GPR78Q96P69 363 aa5.72□□□□□ -1.49
SCFD1-211ENST00000554437 TM2D2Q9BX73 214 aa5.72□□□□□ -1.49
SCFD1-211ENST00000554437 PPCSQ9HAB8 311 aa5.72□□□□□ -1.49
SCFD1-211ENST00000554437 NRIP3Q9NQ35 241 aa5.72□□□□□ -1.49
SCFD1-211ENST00000554437 LIN7CQ9NUP9 197 aaKnown RBP5.72□□□□□ -1.49
SCFD1-211ENST00000554437 C19orf53Q9UNZ5 99 aaPredicted RBP5.72□□□□□ -1.49
SCFD1-211ENST00000554437 B3GNT3Q9Y2A9 372 aa5.72□□□□□ -1.49
SCFD1-211ENST00000554437 SLC38A8A6NNN8 435 aa5.71□□□□□ -1.5
SCFD1-211ENST00000554437 KCNU1A8MYU2 1149 aa5.71□□□□□ -1.5
SCFD1-211ENST00000554437 INPPL1O15357 1258 aa5.71□□□□□ -1.5
SCFD1-211ENST00000554437 KAT7O95251 611 aa5.71□□□□□ -1.5
SCFD1-211ENST00000554437 ALDOAP04075 364 aaKnown RBP5.71□□□□□ -1.5
SCFD1-211ENST00000554437 ENO1P06733 434 aaKnown RBP5.71□□□□□ -1.5
SCFD1-211ENST00000554437 IDUAP35475 653 aa5.71□□□□□ -1.5
SCFD1-211ENST00000554437 GRK6P43250 576 aa5.71□□□□□ -1.5
SCFD1-211ENST00000554437 FAM3BP58499 235 aaPredicted RBP5.71□□□□□ -1.5
SCFD1-211ENST00000554437 TAS2R50P59544 299 aa5.71□□□□□ -1.5
SCFD1-211ENST00000554437 GHRHRQ02643 423 aa5.71□□□□□ -1.5
SCFD1-211ENST00000554437 TLE3Q04726 772 aa5.71□□□□□ -1.5
SCFD1-211ENST00000554437 MTA1Q13330 715 aa5.71□□□□□ -1.5
SCFD1-211ENST00000554437 PRKG1Q13976 671 aa5.71□□□□□ -1.5
SCFD1-211ENST00000554437 COLEC12Q5KU26 742 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms