RNA–Protein interactions for RNA: ENST00000553837.5

SHMT2-207, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 2,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-207ENST00000553837 CHSY1Q86X52 802 aa12.63□□□□□ -0.39
SHMT2-207ENST00000553837 TTC13Q8NBP0 860 aa12.63□□□□□ -0.39
SHMT2-207ENST00000553837 RBM15BQ8NDT2 890 aaKnown RBP12.63□□□□□ -0.39
SHMT2-207ENST00000553837 SPATA18Q8TC71 538 aa12.63□□□□□ -0.39
SHMT2-207ENST00000553837 FAM172AQ8WUF8 416 aa12.63□□□□□ -0.39
SHMT2-207ENST00000553837 EMID1Q96A84 441 aaPredicted RBP12.63□□□□□ -0.39
SHMT2-207ENST00000553837 MAML3Q96JK9 1138 aa12.63□□□□□ -0.39
SHMT2-207ENST00000553837 ARPC5LQ9BPX5 153 aa12.63□□□□□ -0.39
SHMT2-207ENST00000553837 THTPAQ9BU02 230 aa12.63□□□□□ -0.39
SHMT2-207ENST00000553837 KLHL4Q9C0H6 718 aa12.63□□□□□ -0.39
SHMT2-207ENST00000553837 VTA1Q9NP79 307 aa12.63□□□□□ -0.39
SHMT2-207ENST00000553837 TUBA8Q9NY65 449 aaPredicted RBP12.63□□□□□ -0.39
SHMT2-207ENST00000553837 TAGLN3Q9UI15 199 aa12.63□□□□□ -0.39
SHMT2-207ENST00000553837 ITGA11Q9UKX5 1188 aa12.63□□□□□ -0.39
SHMT2-207ENST00000553837 PPM1HQ9ULR3 514 aa12.63□□□□□ -0.39
SHMT2-207ENST00000553837 PLA2G4CQ9UP65 541 aa12.63□□□□□ -0.39
SHMT2-207ENST00000553837 SSX2IPQ9Y2D8 614 aa12.63□□□□□ -0.39
SHMT2-207ENST00000553837 HES2Q9Y543 173 aa12.63□□□□□ -0.39
SHMT2-207ENST00000553837 CAPN14A8MX76 684 aa12.63□□□□□ -0.39
SHMT2-207ENST00000553837 E7ESA3 106 aa12.63□□□□□ -0.39
SHMT2-207ENST00000553837 AP1G1O43747 822 aa12.63□□□□□ -0.39
SHMT2-207ENST00000553837 VCLP18206 1134 aa12.63□□□□□ -0.39
SHMT2-207ENST00000553837 TFE3P19532 575 aaPredicted RBP12.63□□□□□ -0.39
SHMT2-207ENST00000553837 GRIA2P42262 883 aa12.63□□□□□ -0.39
SHMT2-207ENST00000553837 CPA2P48052 419 aa12.63□□□□□ -0.39
SHMT2-207ENST00000553837 CYLC2Q14093 348 aaPredicted RBP12.63□□□□□ -0.39
SHMT2-207ENST00000553837 CA9Q16790 459 aa12.63□□□□□ -0.39
SHMT2-207ENST00000553837 PKDCCQ504Y2 493 aa12.63□□□□□ -0.39
SHMT2-207ENST00000553837 SMYD5Q6GMV2 418 aa12.63□□□□□ -0.39
SHMT2-207ENST00000553837 RAPH1Q70E73 1250 aa12.63□□□□□ -0.39
SHMT2-207ENST00000553837 TTC7BQ86TV6 843 aa12.63□□□□□ -0.39
SHMT2-207ENST00000553837 ACOT1Q86TX2 421 aa12.63□□□□□ -0.39
SHMT2-207ENST00000553837 ATP11CQ8NB49 1132 aa12.63□□□□□ -0.39
SHMT2-207ENST00000553837 FBXO36Q8NEA4 188 aa12.63□□□□□ -0.39
SHMT2-207ENST00000553837 C18orf25Q96B23 403 aaPredicted RBP12.63□□□□□ -0.39
SHMT2-207ENST00000553837 CNPY3Q9BT09 278 aa12.63□□□□□ -0.39
SHMT2-207ENST00000553837 EIF2AQ9BY44 585 aaKnown RBP12.63□□□□□ -0.39
SHMT2-207ENST00000553837 MAGEB5Q9BZ81 275 aa12.63□□□□□ -0.39
SHMT2-207ENST00000553837 NMUR2Q9GZQ4 415 aa12.63□□□□□ -0.39
SHMT2-207ENST00000553837 S100A14Q9HCY8 104 aa12.63□□□□□ -0.39
SHMT2-207ENST00000553837 FAM49BQ9NUQ9 324 aa12.63□□□□□ -0.39
SHMT2-207ENST00000553837 ASNSD1Q9NWL6 643 aa12.63□□□□□ -0.39
SHMT2-207ENST00000553837 KCNK4Q9NYG8 393 aa12.63□□□□□ -0.39
SHMT2-207ENST00000553837 ARMCX1Q9P291 453 aa12.63□□□□□ -0.39
SHMT2-207ENST00000553837 SLC17A7Q9P2U7 560 aa12.63□□□□□ -0.39
SHMT2-207ENST00000553837 SLC7A8Q9UHI5 535 aa12.63□□□□□ -0.39
SHMT2-207ENST00000553837 TMED5Q9Y3A6 229 aa12.63□□□□□ -0.39
SHMT2-207ENST00000553837 PDHXO00330 501 aa12.62□□□□□ -0.39
SHMT2-207ENST00000553837 MAP3K6O95382 1288 aa12.62□□□□□ -0.39
SHMT2-207ENST00000553837 ENO1P06733 434 aaKnown RBP12.62□□□□□ -0.39
SHMT2-207ENST00000553837 P4HA1P13674 534 aa12.62□□□□□ -0.39
SHMT2-207ENST00000553837 CHN2P52757 468 aa12.62□□□□□ -0.39
SHMT2-207ENST00000553837 TBCCQ15814 346 aa12.62□□□□□ -0.39
SHMT2-207ENST00000553837 KLHL38Q2WGJ6 581 aa12.62□□□□□ -0.39
SHMT2-207ENST00000553837 MMEL1Q495T6 779 aa12.62□□□□□ -0.39
SHMT2-207ENST00000553837 HSP90AA5PQ58FG0 334 aa12.62□□□□□ -0.39
SHMT2-207ENST00000553837 C1orf228Q6PIY5 440 aa12.62□□□□□ -0.39
SHMT2-207ENST00000553837 USP50Q70EL3 339 aaPredicted RBP12.62□□□□□ -0.39
SHMT2-207ENST00000553837 ZNF554Q86TJ5 538 aa12.62□□□□□ -0.39
SHMT2-207ENST00000553837 PYROXD1Q8WU10 500 aa12.62□□□□□ -0.39
SHMT2-207ENST00000553837 SYT17Q9BSW7 474 aa12.62□□□□□ -0.39
SHMT2-207ENST00000553837 NT5C1AQ9BXI3 368 aa12.62□□□□□ -0.39
SHMT2-207ENST00000553837 B3GNT5Q9BYG0 378 aa12.62□□□□□ -0.39
SHMT2-207ENST00000553837 FRMD8P1Q9BZ68 369 aaPredicted RBP12.62□□□□□ -0.39
SHMT2-207ENST00000553837 C1orf21Q9H246 121 aa12.62□□□□□ -0.39
SHMT2-207ENST00000553837 C12orf65Q9H3J6 166 aaKnown RBP12.62□□□□□ -0.39
SHMT2-207ENST00000553837 ALG13Q9NP73 1137 aaKnown RBP12.62□□□□□ -0.39
SHMT2-207ENST00000553837 TIMMDC1Q9NPL8 285 aa12.62□□□□□ -0.39
SHMT2-207ENST00000553837 SETD4Q9NVD3 440 aa12.62□□□□□ -0.39
SHMT2-207ENST00000553837 SNTG2Q9NY99 539 aa12.62□□□□□ -0.39
SHMT2-207ENST00000553837 XPO7Q9UIA9 1087 aaKnown RBP12.62□□□□□ -0.39
SHMT2-207ENST00000553837 GINS2Q9Y248 185 aa12.62□□□□□ -0.39
SHMT2-207ENST00000553837 COL1A2P08123 1366 aa12.62□□□□□ -0.39
SHMT2-207ENST00000553837 A0A0J9YVX5 310 aa12.62□□□□□ -0.39
SHMT2-207ENST00000553837 STRNO43815 780 aa12.62□□□□□ -0.39
SHMT2-207ENST00000553837 USP1O94782 785 aa12.62□□□□□ -0.39
SHMT2-207ENST00000553837 STAU1O95793 577 aaKnown RBP12.62□□□□□ -0.39
SHMT2-207ENST00000553837 MMP3P08254 477 aa12.62□□□□□ -0.39
SHMT2-207ENST00000553837 GRM5P41594 1212 aa12.62□□□□□ -0.39
SHMT2-207ENST00000553837 RPL5P46777 297 aaKnown RBP12.62□□□□□ -0.39
SHMT2-207ENST00000553837 ACAP1Q15027 740 aa12.62□□□□□ -0.39
SHMT2-207ENST00000553837 PDK3Q15120 406 aa12.62□□□□□ -0.39
SHMT2-207ENST00000553837 NOMO1Q15155 1222 aa12.62□□□□□ -0.39
SHMT2-207ENST00000553837 BBS9Q3SYG4 887 aa12.62□□□□□ -0.39
SHMT2-207ENST00000553837 GLRA4Q5JXX5 417 aa12.62□□□□□ -0.39
SHMT2-207ENST00000553837 OLFML2BQ68BL8 750 aa12.62□□□□□ -0.39
SHMT2-207ENST00000553837 OLFML1Q6UWY5 402 aa12.62□□□□□ -0.39
SHMT2-207ENST00000553837 C3orf62Q6ZUJ4 267 aa12.62□□□□□ -0.39
SHMT2-207ENST00000553837 PCGF5Q86SE9 256 aa12.62□□□□□ -0.39
SHMT2-207ENST00000553837 DHDDSQ86SQ9 333 aa12.62□□□□□ -0.39
SHMT2-207ENST00000553837 SCUBE3Q8IX30 993 aa12.62□□□□□ -0.39
SHMT2-207ENST00000553837 ALDH16A1Q8IZ83 802 aa12.62□□□□□ -0.39
SHMT2-207ENST00000553837 PQLC3Q8N755 202 aa12.62□□□□□ -0.39
SHMT2-207ENST00000553837 MZB1Q8WU39 189 aa12.62□□□□□ -0.39
SHMT2-207ENST00000553837 MS4A4AQ96JQ5 239 aa12.62□□□□□ -0.39
SHMT2-207ENST00000553837 DHRS4Q9BTZ2 278 aa12.62□□□□□ -0.39
SHMT2-207ENST00000553837 ADAMTS10Q9H324 1103 aa12.62□□□□□ -0.39
SHMT2-207ENST00000553837 DPEP3Q9H4B8 488 aa12.62□□□□□ -0.39
SHMT2-207ENST00000553837 RSAD1Q9HA92 442 aa12.62□□□□□ -0.39
SHMT2-207ENST00000553837 USP29Q9HBJ7 922 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms