RNA–Protein interactions for RNA: ENST00000553751.1

FOXA1-203, Transcript of forkhead box A1, humanhuman

TSL 4

Gene FOXA1, Length 507 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-203ENST00000553751 MMS22LQ6ZRQ5 1243 aa21.14■□□□□ 0.97
FOXA1-203ENST00000553751 TRMT11Q7Z4G4 463 aaKnown RBP21.14■□□□□ 0.97
FOXA1-203ENST00000553751 ANKS1BQ7Z6G8 1248 aa21.14■□□□□ 0.97
FOXA1-203ENST00000553751 ACOX2Q99424 681 aa21.14■□□□□ 0.97
FOXA1-203ENST00000553751 ADAM33Q9BZ11 813 aa21.14■□□□□ 0.97
FOXA1-203ENST00000553751 NUCKS1Q9H1E3 243 aaKnown RBP21.14■□□□□ 0.97
FOXA1-203ENST00000553751 COX16Q9P0S2 106 aa21.14■□□□□ 0.97
FOXA1-203ENST00000553751 EBF1Q9UH73 591 aa21.14■□□□□ 0.97
FOXA1-203ENST00000553751 MYO6Q9UM54 1294 aa21.14■□□□□ 0.97
FOXA1-203ENST00000553751 ZNF292O60281 2723 aa21.14■□□□□ 0.97
FOXA1-203ENST00000553751 KCNU1A8MYU2 1149 aa21.13■□□□□ 0.97
FOXA1-203ENST00000553751 UNGP13051 313 aaPredicted RBP21.13■□□□□ 0.97
FOXA1-203ENST00000553751 GBP1P32455 592 aa21.13■□□□□ 0.97
FOXA1-203ENST00000553751 FANCCQ00597 558 aa21.13■□□□□ 0.97
FOXA1-203ENST00000553751 CENPCQ03188 943 aa21.13■□□□□ 0.97
FOXA1-203ENST00000553751 MS4A13Q5J8X5 152 aa21.13■□□□□ 0.97
FOXA1-203ENST00000553751 RASSF3Q86WH2 238 aa21.13■□□□□ 0.97
FOXA1-203ENST00000553751 HJURPQ8NCD3 748 aaPredicted RBP21.13■□□□□ 0.97
FOXA1-203ENST00000553751 NT5C3BQ969T7 300 aa21.13■□□□□ 0.97
FOXA1-203ENST00000553751 BTN2A3PQ96KV6 586 aa21.13■□□□□ 0.97
FOXA1-203ENST00000553751 NPY6RQ99463 290 aa21.13■□□□□ 0.97
FOXA1-203ENST00000553751 DDX50Q9BQ39 737 aaKnown RBP21.13■□□□□ 0.97
FOXA1-203ENST00000553751 TTYH3Q9C0H2 523 aa21.13■□□□□ 0.97
FOXA1-203ENST00000553751 SLTMQ9NWH9 1034 aaKnown RBP eCLIP21.13■□□□□ 0.97
FOXA1-203ENST00000553751 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP21.13■□□□□ 0.97
FOXA1-203ENST00000553751 EML5Q05BV3 1969 aa21.13■□□□□ 0.97
FOXA1-203ENST00000553751 LRRC53A6NM62 1247 aa21.12■□□□□ 0.97
FOXA1-203ENST00000553751 GOLGA8SH3BPF8 625 aa21.12■□□□□ 0.97
FOXA1-203ENST00000553751 AXIN1O15169 862 aa21.12■□□□□ 0.97
FOXA1-203ENST00000553751 TBL1XO60907 577 aa21.12■□□□□ 0.97
FOXA1-203ENST00000553751 SLC2A3P11169 496 aa21.12■□□□□ 0.97
FOXA1-203ENST00000553751 FERP16591 822 aa21.12■□□□□ 0.97
FOXA1-203ENST00000553751 TFE3P19532 575 aaPredicted RBP21.12■□□□□ 0.97
FOXA1-203ENST00000553751 HLA-FP30511 346 aa21.12■□□□□ 0.97
FOXA1-203ENST00000553751 NTSR1P30989 418 aa21.12■□□□□ 0.97
FOXA1-203ENST00000553751 CCR1P32246 355 aa21.12■□□□□ 0.97
FOXA1-203ENST00000553751 FLT3P36888 993 aa21.12■□□□□ 0.97
FOXA1-203ENST00000553751 RNASE9P60153 205 aaKnown RBP21.12■□□□□ 0.97
FOXA1-203ENST00000553751 NME3Q13232 169 aa21.12■□□□□ 0.97
FOXA1-203ENST00000553751 CLEC16AQ2KHT3 1053 aa21.12■□□□□ 0.97
FOXA1-203ENST00000553751 ANO7Q6IWH7 933 aa21.12■□□□□ 0.97
FOXA1-203ENST00000553751 TRNP1Q6NT89 227 aa21.12■□□□□ 0.97
FOXA1-203ENST00000553751 MDGA1Q8NFP4 955 aa21.12■□□□□ 0.97
FOXA1-203ENST00000553751 SLC30A5Q8TAD4 765 aa21.12■□□□□ 0.97
FOXA1-203ENST00000553751 OLIG1Q8TAK6 271 aa21.12■□□□□ 0.97
FOXA1-203ENST00000553751 WFDC5Q8TCV5 224 aa21.12■□□□□ 0.97
FOXA1-203ENST00000553751 C11orf70Q9BRQ4 267 aa21.12■□□□□ 0.97
FOXA1-203ENST00000553751 RRN3Q9NYV6 651 aa21.12■□□□□ 0.97
FOXA1-203ENST00000553751 TMEM59LQ9UK28 342 aa21.12■□□□□ 0.97
FOXA1-203ENST00000553751 STAP1Q9ULZ2 295 aa21.12■□□□□ 0.97
FOXA1-203ENST00000553751 PTPRZ1P23471 2315 aaPredicted RBP21.11■□□□□ 0.97
FOXA1-203ENST00000553751 FRYLO94915 3013 aa21.11■□□□□ 0.97
FOXA1-203ENST00000553751 GOLGA6L19H0YKK7 550 aa21.11■□□□□ 0.97
FOXA1-203ENST00000553751 M0QYT0 321 aa21.11■□□□□ 0.97
FOXA1-203ENST00000553751 TACR2P21452 398 aa21.11■□□□□ 0.97
FOXA1-203ENST00000553751 WASP42768 502 aa21.11■□□□□ 0.97
FOXA1-203ENST00000553751 RPS24P62847 133 aaKnown RBP21.11■□□□□ 0.97
FOXA1-203ENST00000553751 PTP4A2Q12974 167 aa21.11■□□□□ 0.97
FOXA1-203ENST00000553751 SIM2Q14190 667 aaPredicted RBP21.11■□□□□ 0.97
FOXA1-203ENST00000553751 EIF4HQ15056 248 aaKnown RBP21.11■□□□□ 0.97
FOXA1-203ENST00000553751 RAP1GAP2Q684P5 730 aa21.11■□□□□ 0.97
FOXA1-203ENST00000553751 TMEM215Q68D42 235 aa21.11■□□□□ 0.97
FOXA1-203ENST00000553751 IRF2BP2Q7Z5L9 587 aa21.11■□□□□ 0.97
FOXA1-203ENST00000553751 CHPFQ8IZ52 775 aa21.11■□□□□ 0.97
FOXA1-203ENST00000553751 DDX51Q8N8A6 666 aaKnown RBP eCLIP21.11■□□□□ 0.97
FOXA1-203ENST00000553751 ATP6V0D2Q8N8Y2 350 aa21.11■□□□□ 0.97
FOXA1-203ENST00000553751 GAB3Q8WWW8 586 aa21.11■□□□□ 0.97
FOXA1-203ENST00000553751 PRMT1Q99873 361 aaKnown RBP21.11■□□□□ 0.97
FOXA1-203ENST00000553751 GABRG3Q99928 467 aa21.11■□□□□ 0.97
FOXA1-203ENST00000553751 AGPAT1Q99943 283 aa21.11■□□□□ 0.97
FOXA1-203ENST00000553751 SYT11Q9BT88 431 aa21.11■□□□□ 0.97
FOXA1-203ENST00000553751 CD248Q9HCU0 757 aa21.11■□□□□ 0.97
FOXA1-203ENST00000553751 PIGVQ9NUD9 493 aa21.11■□□□□ 0.97
FOXA1-203ENST00000553751 A0A1W2PQF6 199 aa21.1■□□□□ 0.97
FOXA1-203ENST00000553751 RPP40O75818 363 aaKnown RBP21.1■□□□□ 0.97
FOXA1-203ENST00000553751 CCDC172P0C7W6 258 aa21.1■□□□□ 0.97
FOXA1-203ENST00000553751 HOXB2P14652 356 aa21.1■□□□□ 0.97
FOXA1-203ENST00000553751 ABCB4P21439 1286 aa21.1■□□□□ 0.97
FOXA1-203ENST00000553751 PBX1P40424 430 aa21.1■□□□□ 0.97
FOXA1-203ENST00000553751 NSFP46459 744 aaKnown RBP21.1■□□□□ 0.97
FOXA1-203ENST00000553751 SULT1E1P49888 294 aa21.1■□□□□ 0.97
FOXA1-203ENST00000553751 SLC25A52Q3SY17 297 aa21.1■□□□□ 0.97
FOXA1-203ENST00000553751 E4F1Q66K89 784 aaPredicted RBP21.1■□□□□ 0.97
FOXA1-203ENST00000553751 PRR23BQ6ZRT6 265 aa21.1■□□□□ 0.97
FOXA1-203ENST00000553751 ARCQ7LC44 396 aa21.1■□□□□ 0.97
FOXA1-203ENST00000553751 KIAA0907Q7Z7F0 614 aaPredicted RBP21.1■□□□□ 0.97
FOXA1-203ENST00000553751 CHSY1Q86X52 802 aa21.1■□□□□ 0.97
FOXA1-203ENST00000553751 PHF13Q86YI8 300 aaPredicted RBP21.1■□□□□ 0.97
FOXA1-203ENST00000553751 LGI2Q8N0V4 545 aa21.1■□□□□ 0.97
FOXA1-203ENST00000553751 RNF34Q969K3 372 aa21.1■□□□□ 0.97
FOXA1-203ENST00000553751 PGAP3Q96FM1 320 aaPredicted RBP21.1■□□□□ 0.97
FOXA1-203ENST00000553751 TBCBQ99426 244 aa21.1■□□□□ 0.97
FOXA1-203ENST00000553751 TPSD1Q9BZJ3 242 aa21.1■□□□□ 0.97
FOXA1-203ENST00000553751 POLMQ9NP87 494 aaPredicted RBP21.1■□□□□ 0.97
FOXA1-203ENST00000553751 METTL5Q9NRN9 209 aaKnown RBP21.1■□□□□ 0.97
FOXA1-203ENST00000553751 ABCB8Q9NUT2 735 aa21.1■□□□□ 0.97
FOXA1-203ENST00000553751 ELOVL2Q9NXB9 296 aa21.1■□□□□ 0.97
FOXA1-203ENST00000553751 CACNA2D2Q9NY47 1150 aa21.1■□□□□ 0.97
FOXA1-203ENST00000553751 STIM2Q9P246 746 aa21.1■□□□□ 0.97
FOXA1-203ENST00000553751 THAP10Q9P2Z0 257 aaPredicted RBP21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms