RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 SRGAP2BP0DMP2 458 aa4.58□□□□□ -1.68
SCFD1-210ENST00000553693 AGTR2P50052 363 aa4.58□□□□□ -1.68
SCFD1-210ENST00000553693 ZNF84P51523 738 aa4.58□□□□□ -1.68
SCFD1-210ENST00000553693 INPP5JQ15735 1006 aaPredicted RBP4.58□□□□□ -1.68
SCFD1-210ENST00000553693 MAPKAPK3Q16644 382 aa4.58□□□□□ -1.68
SCFD1-210ENST00000553693 PRTGQ2VWP7 1150 aa4.58□□□□□ -1.68
SCFD1-210ENST00000553693 ARL13BQ3SXY8 428 aa4.58□□□□□ -1.68
SCFD1-210ENST00000553693 ANXA2RQ3ZCQ2 193 aa4.58□□□□□ -1.68
SCFD1-210ENST00000553693 ARHGAP15Q53QZ3 475 aa4.58□□□□□ -1.68
SCFD1-210ENST00000553693 COBLL1Q53SF7 1204 aa4.58□□□□□ -1.68
SCFD1-210ENST00000553693 LIPMQ5VYY2 423 aa4.58□□□□□ -1.68
SCFD1-210ENST00000553693 RAP1GAP2Q684P5 730 aa4.58□□□□□ -1.68
SCFD1-210ENST00000553693 DHRS13Q6UX07 377 aa4.58□□□□□ -1.68
SCFD1-210ENST00000553693 PIK3AP1Q6ZUJ8 805 aa4.58□□□□□ -1.68
SCFD1-210ENST00000553693 CCAR1Q8IX12 1150 aaKnown RBP4.58□□□□□ -1.68
SCFD1-210ENST00000553693 TXLNBQ8N3L3 684 aa4.58□□□□□ -1.68
SCFD1-210ENST00000553693 FAM47BQ8NA70 645 aa4.58□□□□□ -1.68
SCFD1-210ENST00000553693 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.58□□□□□ -1.686e-9■□□□□ 8.9
SCFD1-210ENST00000553693 RGL1Q9NZL6 768 aa4.58□□□□□ -1.68
SCFD1-210ENST00000553693 PCDHA12Q9UN75 941 aa4.58□□□□□ -1.68
SCFD1-210ENST00000553693 MAN2B2Q9Y2E5 1009 aa4.58□□□□□ -1.68
SCFD1-210ENST00000553693 KIR2DS5A0A0G2JLQ3 304 aa4.57□□□□□ -1.68
SCFD1-210ENST00000553693 ZNF814B7Z6K7 855 aa4.57□□□□□ -1.68
SCFD1-210ENST00000553693 KIR2DS3K7RE56 304 aa4.57□□□□□ -1.68
SCFD1-210ENST00000553693 NDUFB8O95169 186 aa4.57□□□□□ -1.68
SCFD1-210ENST00000553693 ALADP13716 330 aa4.57□□□□□ -1.68
SCFD1-210ENST00000553693 PECAM1P16284 738 aaPredicted RBP4.57□□□□□ -1.68
SCFD1-210ENST00000553693 STAT6P42226 847 aa4.57□□□□□ -1.68
SCFD1-210ENST00000553693 PMS2P11Q13670 270 aa4.57□□□□□ -1.68
SCFD1-210ENST00000553693 HLTFQ14527 1009 aaKnown RBP eCLIP4.57□□□□□ -1.68
SCFD1-210ENST00000553693 ISM2Q6H9L7 571 aa4.57□□□□□ -1.68
SCFD1-210ENST00000553693 ZNF549Q6P9A3 640 aa4.57□□□□□ -1.68
SCFD1-210ENST00000553693 FBXO38Q6PIJ6 1188 aa4.57□□□□□ -1.68
SCFD1-210ENST00000553693 LRIG3Q6UXM1 1119 aa4.57□□□□□ -1.68
SCFD1-210ENST00000553693 C11orf96Q7Z7L8 435 aa4.57□□□□□ -1.68
SCFD1-210ENST00000553693 DPP9Q86TI2 863 aa4.57□□□□□ -1.68
SCFD1-210ENST00000553693 RHPN2Q8IUC4 686 aa4.57□□□□□ -1.68
SCFD1-210ENST00000553693 ADAMTS15Q8TE58 950 aa4.57□□□□□ -1.68
SCFD1-210ENST00000553693 THOC3Q96J01 351 aaKnown RBP4.57□□□□□ -1.68
SCFD1-210ENST00000553693 TBCBQ99426 244 aa4.57□□□□□ -1.68
SCFD1-210ENST00000553693 THSD1Q9NS62 852 aa4.57□□□□□ -1.68
SCFD1-210ENST00000553693 WWOXQ9NZC7 414 aa4.57□□□□□ -1.68
SCFD1-210ENST00000553693 COG5Q9UP83 839 aa4.57□□□□□ -1.68
SCFD1-210ENST00000553693 SLC8A2Q9UPR5 921 aa4.57□□□□□ -1.68
SCFD1-210ENST00000553693 PCDHB7Q9Y5E2 793 aa4.57□□□□□ -1.68
SCFD1-210ENST00000553693 DPPA5A6NC42 116 aa4.56□□□□□ -1.68
SCFD1-210ENST00000553693 KIF3BO15066 747 aa4.56□□□□□ -1.68
SCFD1-210ENST00000553693 PMM2O15305 246 aa4.56□□□□□ -1.68
SCFD1-210ENST00000553693 SMAD6O43541 496 aaKnown RBP4.56□□□□□ -1.68
SCFD1-210ENST00000553693 EPN2O95208 641 aa4.56□□□□□ -1.68
SCFD1-210ENST00000553693 NDST3O95803 873 aa4.56□□□□□ -1.68
SCFD1-210ENST00000553693 T-ENOLP0DO92 83 aa4.56□□□□□ -1.68
SCFD1-210ENST00000553693 TRIM27P14373 513 aa4.56□□□□□ -1.68
SCFD1-210ENST00000553693 CDC25AP30304 524 aa4.56□□□□□ -1.68
SCFD1-210ENST00000553693 KCNJ4P48050 445 aa4.56□□□□□ -1.68
SCFD1-210ENST00000553693 NANOS2P60321 138 aaKnown RBP4.56□□□□□ -1.68
SCFD1-210ENST00000553693 CSHL1Q14406 222 aa4.56□□□□□ -1.68
SCFD1-210ENST00000553693 ARL6IP4Q66PJ3 421 aaKnown RBP4.56□□□□□ -1.68
SCFD1-210ENST00000553693 ZNF474Q6S9Z5 364 aaPredicted RBP4.56□□□□□ -1.68
SCFD1-210ENST00000553693 MEPCEQ7L2J0 689 aaKnown RBP4.56□□□□□ -1.68
SCFD1-210ENST00000553693 RASGRP3Q8IV61 690 aa4.56□□□□□ -1.68
SCFD1-210ENST00000553693 PELI3Q8N2H9 469 aa4.56□□□□□ -1.68
SCFD1-210ENST00000553693 BRI3BPQ8WY22 251 aa4.56□□□□□ -1.68
SCFD1-210ENST00000553693 FAR2Q96K12 515 aa4.56□□□□□ -1.68
SCFD1-210ENST00000553693 C8orf48Q96LL4 319 aa4.56□□□□□ -1.68
SCFD1-210ENST00000553693 PIMREGQ9BSJ6 248 aa4.56□□□□□ -1.68
SCFD1-210ENST00000553693 MRPL44Q9H9J2 332 aaKnown RBP4.56□□□□□ -1.68
SCFD1-210ENST00000553693 PRDM16Q9HAZ2 1276 aa4.56□□□□□ -1.68
SCFD1-210ENST00000553693 KCNK9Q9NPC2 374 aa4.56□□□□□ -1.68
SCFD1-210ENST00000553693 FZD3Q9NPG1 666 aa4.56□□□□□ -1.68
SCFD1-210ENST00000553693 HELLSQ9NRZ9 838 aa4.56□□□□□ -1.68
SCFD1-210ENST00000553693 GJB4Q9NTQ9 266 aa4.56□□□□□ -1.68
SCFD1-210ENST00000553693 ANAPC4Q9UJX5 808 aa4.56□□□□□ -1.68
SCFD1-210ENST00000553693 CNTNAP2Q9UHC6 1331 aa4.55□□□□□ -1.68
SCFD1-210ENST00000553693 TMEM272A0A1B0GTI8 110 aa4.55□□□□□ -1.68
SCFD1-210ENST00000553693 GXYLT2A0PJZ3 443 aa4.55□□□□□ -1.68
SCFD1-210ENST00000553693 FAM234BA2RU67 622 aa4.55□□□□□ -1.68
SCFD1-210ENST00000553693 NPC1O15118 1278 aa4.55□□□□□ -1.68
SCFD1-210ENST00000553693 FGF2P09038 288 aa4.55□□□□□ -1.68
SCFD1-210ENST00000553693 HARSP12081 509 aaKnown RBP4.55□□□□□ -1.68
SCFD1-210ENST00000553693 CDKN2AP42771 156 aaKnown RBP4.55□□□□□ -1.68
SCFD1-210ENST00000553693 PGGT1BP53609 377 aa4.55□□□□□ -1.68
SCFD1-210ENST00000553693 ERV3-1Q14264 604 aa4.55□□□□□ -1.68
SCFD1-210ENST00000553693 PTGR1Q14914 329 aa4.55□□□□□ -1.68
SCFD1-210ENST00000553693 SLC35G1Q2M3R5 365 aa4.55□□□□□ -1.68
SCFD1-210ENST00000553693 DDIASQ8IXT1 998 aa4.55□□□□□ -1.68
SCFD1-210ENST00000553693 TMEM199Q8N511 208 aa4.55□□□□□ -1.68
SCFD1-210ENST00000553693 GLIS1Q8NBF1 620 aa4.55□□□□□ -1.68
SCFD1-210ENST00000553693 ADPRHL1Q8NDY3 354 aa4.55□□□□□ -1.68
SCFD1-210ENST00000553693 ACRBPQ8NEB7 543 aa4.55□□□□□ -1.68
SCFD1-210ENST00000553693 SRFBP1Q8NEF9 429 aaKnown RBP4.55□□□□□ -1.68
SCFD1-210ENST00000553693 CENPIQ92674 756 aaPredicted RBP4.55□□□□□ -1.68
SCFD1-210ENST00000553693 CLMNQ96JQ2 1002 aa4.55□□□□□ -1.68
SCFD1-210ENST00000553693 GDF15Q99988 308 aa4.55□□□□□ -1.68
SCFD1-210ENST00000553693 ABHD14AQ9BUJ0 271 aa4.55□□□□□ -1.68
SCFD1-210ENST00000553693 ELOVL1Q9BW60 279 aa4.55□□□□□ -1.68
SCFD1-210ENST00000553693 HIPK2Q9H2X6 1198 aa4.55□□□□□ -1.68
SCFD1-210ENST00000553693 MLXIPQ9HAP2 919 aa4.55□□□□□ -1.68
SCFD1-210ENST00000553693 NECTIN3Q9NQS3 549 aa4.55□□□□□ -1.68
SCFD1-210ENST00000553693 CEP83Q9Y592 693 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms