RNA–Protein interactions for RNA: ENST00000553686.5

ATXN3-223, Transcript of ataxin 3, human

TSL 1 (best)

Gene ATXN3, Length 869 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATXN3-223	ENST00000553686	ZDHHC7	Q9NXF8	308 aa		6.6	□□□□□ -1.35
ATXN3-223	ENST00000553686	ING3	Q9NXR8	418 aa		6.6	□□□□□ -1.35
ATXN3-223	ENST00000553686	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	6.6	□□□□□ -1.35
ATXN3-223	ENST00000553686	RAI2	Q9Y5P3	530 aa		6.6	□□□□□ -1.35
ATXN3-223	ENST00000553686	SMG1	Q96Q15	3661 aa	Known RBP	6.6	□□□□□ -1.35
ATXN3-223	ENST00000553686	IGSF10	Q6WRI0	2623 aa		6.59	□□□□□ -1.35
ATXN3-223	ENST00000553686	C4orf47	A7E2U8	309 aa		6.59	□□□□□ -1.35
ATXN3-223	ENST00000553686	CAPN14	A8MX76	684 aa		6.59	□□□□□ -1.35
ATXN3-223	ENST00000553686	GCOM1	H8Y6P7	765 aa	Predicted RBP	6.59	□□□□□ -1.35
ATXN3-223	ENST00000553686		J3QKU1	62 aa		6.59	□□□□□ -1.35
ATXN3-223	ENST00000553686	RNF113A	O15541	343 aa	Known RBP	6.59	□□□□□ -1.35
ATXN3-223	ENST00000553686	ORC4	O43929	436 aa		6.59	□□□□□ -1.35
ATXN3-223	ENST00000553686	DHX16	O60231	1041 aa	Known RBP	6.59	□□□□□ -1.35
ATXN3-223	ENST00000553686	ZC3H11A	O75152	810 aa	Known RBP eCLIP	6.59	□□□□□ -1.35
ATXN3-223	ENST00000553686	EPN2	O95208	641 aa		6.59	□□□□□ -1.35
ATXN3-223	ENST00000553686	LY86	O95711	162 aa		6.59	□□□□□ -1.35
ATXN3-223	ENST00000553686	POLR2M	P0CAP2	368 aa		6.59	□□□□□ -1.35
ATXN3-223	ENST00000553686	SNHG28	P0DPA3	235 aa		6.59	□□□□□ -1.35
ATXN3-223	ENST00000553686	PLA2G2A	P14555	144 aa		6.59	□□□□□ -1.35
ATXN3-223	ENST00000553686	HOXA6	P31267	233 aa		6.59	□□□□□ -1.35
ATXN3-223	ENST00000553686	GPR15	P49685	360 aa		6.59	□□□□□ -1.35
ATXN3-223	ENST00000553686	CRYBB1	P53674	252 aa	Predicted RBP	6.59	□□□□□ -1.35
ATXN3-223	ENST00000553686	SRSF5	Q13243	272 aa	Known RBP	6.59	□□□□□ -1.35
ATXN3-223	ENST00000553686	CCDC6	Q16204	474 aa		6.59	□□□□□ -1.35
ATXN3-223	ENST00000553686	QRICH1	Q2TAL8	776 aa		6.59	□□□□□ -1.35
ATXN3-223	ENST00000553686	ECHDC2	Q86YB7	292 aa		6.59	□□□□□ -1.35
ATXN3-223	ENST00000553686	LYSMD2	Q8IV50	215 aa		6.59	□□□□□ -1.35
ATXN3-223	ENST00000553686	GSPT2	Q8IYD1	628 aa	Known RBP	6.59	□□□□□ -1.35
ATXN3-223	ENST00000553686	ADGRF4	Q8IZF3	695 aa		6.59	□□□□□ -1.35
ATXN3-223	ENST00000553686	PIK3C3	Q8NEB9	887 aa		6.59	□□□□□ -1.35
ATXN3-223	ENST00000553686	LRIG1	Q96JA1	1093 aa		6.59	□□□□□ -1.35
ATXN3-223	ENST00000553686	CDHR1	Q96JP9	859 aa		6.59	□□□□□ -1.35
ATXN3-223	ENST00000553686	EDEM2	Q9BV94	578 aa		6.59	□□□□□ -1.35
ATXN3-223	ENST00000553686	ZNF747	Q9BV97	191 aa		6.59	□□□□□ -1.35
ATXN3-223	ENST00000553686	VPS11	Q9H270	941 aa		6.59	□□□□□ -1.35
ATXN3-223	ENST00000553686	HECA	Q9UBI9	543 aa	Predicted RBP	6.59	□□□□□ -1.35
ATXN3-223	ENST00000553686	PRSS50	Q9UI38	385 aa		6.59	□□□□□ -1.35
ATXN3-223	ENST00000553686	NDRG2	Q9UN36	371 aa	Known RBP	6.59	□□□□□ -1.35
ATXN3-223	ENST00000553686	NLRC5	Q86WI3	1866 aa		6.58	□□□□□ -1.36
ATXN3-223	ENST00000553686	NBEA	Q8NFP9	2946 aa		6.58	□□□□□ -1.36
ATXN3-223	ENST00000553686		A0A0U1RQF3	1178 aa		6.58	□□□□□ -1.36
ATXN3-223	ENST00000553686	NRP2	O60462	931 aa		6.58	□□□□□ -1.36
ATXN3-223	ENST00000553686	ULK1	O75385	1050 aa		6.58	□□□□□ -1.36
ATXN3-223	ENST00000553686	ALDH1A2	O94788	518 aa		6.58	□□□□□ -1.36
ATXN3-223	ENST00000553686	PAPSS2	O95340	614 aa	Predicted RBP	6.58	□□□□□ -1.36
ATXN3-223	ENST00000553686	ALDH2	P05091	517 aa		6.58	□□□□□ -1.36
ATXN3-223	ENST00000553686	UROD	P06132	367 aa		6.58	□□□□□ -1.36
ATXN3-223	ENST00000553686	GALT	P07902	379 aa		6.58	□□□□□ -1.36
ATXN3-223	ENST00000553686	GOLGA8H	P0CJ92	632 aa		6.58	□□□□□ -1.36
ATXN3-223	ENST00000553686	TRIM27	P14373	513 aa		6.58	□□□□□ -1.36
ATXN3-223	ENST00000553686	HOXA13	P31271	388 aa	Predicted RBP	6.58	□□□□□ -1.36
ATXN3-223	ENST00000553686	MPL	P40238	635 aa		6.58	□□□□□ -1.36
ATXN3-223	ENST00000553686	AK2	P54819	239 aa		6.58	□□□□□ -1.36
ATXN3-223	ENST00000553686	NPEPPS	P55786	919 aa		6.58	□□□□□ -1.36
ATXN3-223	ENST00000553686	SESN3	P58005	492 aa		6.58	□□□□□ -1.36
ATXN3-223	ENST00000553686	SATB1	Q01826	763 aa		6.58	□□□□□ -1.36
ATXN3-223	ENST00000553686	RNASEL	Q05823	741 aa	Known RBP	6.58	□□□□□ -1.36
ATXN3-223	ENST00000553686	FOXE3	Q13461	319 aa		6.58	□□□□□ -1.36
ATXN3-223	ENST00000553686	PDCD1	Q15116	288 aa		6.58	□□□□□ -1.36
ATXN3-223	ENST00000553686	CT83	Q5H943	113 aa		6.58	□□□□□ -1.36
ATXN3-223	ENST00000553686	WDR5B	Q86VZ2	330 aa		6.58	□□□□□ -1.36
ATXN3-223	ENST00000553686	CLRN3	Q8NCR9	226 aa		6.58	□□□□□ -1.36
ATXN3-223	ENST00000553686	LSM14A	Q8ND56	463 aa	Known RBP	6.58	□□□□□ -1.36
ATXN3-223	ENST00000553686	IL31RA	Q8NI17	732 aa		6.58	□□□□□ -1.36
ATXN3-223	ENST00000553686	FRAT1	Q92837	279 aa	Predicted RBP	6.58	□□□□□ -1.36
ATXN3-223	ENST00000553686	ARL8A	Q96BM9	186 aa		6.58	□□□□□ -1.36
ATXN3-223	ENST00000553686	ZNF707	Q96C28	371 aa	Predicted RBP	6.58	□□□□□ -1.36
ATXN3-223	ENST00000553686	FDXACB1	Q9BRP7	624 aa	Predicted RBP	6.58	□□□□□ -1.36
ATXN3-223	ENST00000553686	TMPRSS5	Q9H3S3	457 aa		6.58	□□□□□ -1.36
ATXN3-223	ENST00000553686	VAT1L	Q9HCJ6	419 aa		6.58	□□□□□ -1.36
ATXN3-223	ENST00000553686	HEBP1	Q9NRV9	189 aa		6.58	□□□□□ -1.36
ATXN3-223	ENST00000553686	TOPORS	Q9NS56	1045 aa	Predicted RBP	6.58	□□□□□ -1.36
ATXN3-223	ENST00000553686	GIT1	Q9Y2X7	761 aa		6.58	□□□□□ -1.36
ATXN3-223	ENST00000553686	ZNF462	Q96JM2	2506 aa		6.58	□□□□□ -1.36
ATXN3-223	ENST00000553686	ITPR1	Q14643	2758 aa		6.58	□□□□□ -1.36
ATXN3-223	ENST00000553686	HECTD1	Q9ULT8	2610 aa		6.58	□□□□□ -1.36
ATXN3-223	ENST00000553686	NAV1	Q8NEY1	1877 aa		6.58	□□□□□ -1.36
ATXN3-223	ENST00000553686	DMXL2	Q8TDJ6	3036 aa		6.57	□□□□□ -1.36
ATXN3-223	ENST00000553686	GSTTP1	A0A1W2PQM5	241 aa		6.57	□□□□□ -1.36
ATXN3-223	ENST00000553686	BRINP1	O60477	761 aa		6.57	□□□□□ -1.36
ATXN3-223	ENST00000553686	ECI2	O75521	394 aa		6.57	□□□□□ -1.36
ATXN3-223	ENST00000553686	RFPL2	O75678	378 aa		6.57	□□□□□ -1.36
ATXN3-223	ENST00000553686	SEC24D	O94855	1032 aa	Predicted RBP	6.57	□□□□□ -1.36
ATXN3-223	ENST00000553686	ACRV1	P26436	265 aa		6.57	□□□□□ -1.36
ATXN3-223	ENST00000553686	KLRC1	P26715	233 aa		6.57	□□□□□ -1.36
ATXN3-223	ENST00000553686	NRG3	P56975	720 aa		6.57	□□□□□ -1.36
ATXN3-223	ENST00000553686	PLCB4	Q15147	1175 aa		6.57	□□□□□ -1.36
ATXN3-223	ENST00000553686	CCDC178	Q5BJE1	867 aa		6.57	□□□□□ -1.36
ATXN3-223	ENST00000553686	PITRM1	Q5JRX3	1037 aa		6.57	□□□□□ -1.36
ATXN3-223	ENST00000553686	RRP12	Q5JTH9	1297 aa	Known RBP	6.57	□□□□□ -1.36
ATXN3-223	ENST00000553686	CLLU1OS	Q5K130	101 aa		6.57	□□□□□ -1.36
ATXN3-223	ENST00000553686	FKBP15	Q5T1M5	1219 aa		6.57	□□□□□ -1.36
ATXN3-223	ENST00000553686	EGFLAM	Q63HQ2	1017 aa		6.57	□□□□□ -1.36
ATXN3-223	ENST00000553686	MTHFD1L	Q6UB35	978 aa		6.57	□□□□□ -1.36
ATXN3-223	ENST00000553686	TAS1R1	Q7RTX1	841 aa		6.57	□□□□□ -1.36
ATXN3-223	ENST00000553686	UNC5B	Q8IZJ1	945 aa		6.57	□□□□□ -1.36
ATXN3-223	ENST00000553686	KBTBD3	Q8NAB2	608 aa		6.57	□□□□□ -1.36
ATXN3-223	ENST00000553686	FAM3C	Q92520	227 aa		6.57	□□□□□ -1.36
ATXN3-223	ENST00000553686	DNASE1L2	Q92874	299 aa		6.57	□□□□□ -1.36
ATXN3-223	ENST00000553686	FGF13	Q92913	245 aa		6.57	□□□□□ -1.36

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