RNA–Protein interactions for RNA: ENST00000553659.1

ACTN1-209, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 434 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-209ENST00000553659 MIF4GDA9UHW6 222 aaKnown RBP16.72■□□□□ 0.27
ACTN1-209ENST00000553659 F8VP50 259 aa16.72■□□□□ 0.27
ACTN1-209ENST00000553659 KHNYNO15037 678 aaKnown RBP16.72■□□□□ 0.27
ACTN1-209ENST00000553659 VNN1O95497 513 aa16.72■□□□□ 0.27
ACTN1-209ENST00000553659 FTCDO95954 541 aa16.72■□□□□ 0.27
ACTN1-209ENST00000553659 FTLP02792 175 aaPredicted RBP16.72■□□□□ 0.27
ACTN1-209ENST00000553659 CYP17A1P05093 508 aa16.72■□□□□ 0.27
ACTN1-209ENST00000553659 FMO1Q01740 532 aa16.72■□□□□ 0.27
ACTN1-209ENST00000553659 DHCR24Q15392 516 aa16.72■□□□□ 0.27
ACTN1-209ENST00000553659 MDH1BQ5I0G3 518 aa16.72■□□□□ 0.27
ACTN1-209ENST00000553659 DAB2IPQ5VWQ8 1189 aa16.72■□□□□ 0.27
ACTN1-209ENST00000553659 ANO7Q6IWH7 933 aa16.72■□□□□ 0.27
ACTN1-209ENST00000553659 DAAM2Q86T65 1068 aa16.72■□□□□ 0.27
ACTN1-209ENST00000553659 SPATA4Q8NEY3 305 aa16.72■□□□□ 0.27
ACTN1-209ENST00000553659 OR6B3Q8NGW1 331 aa16.72■□□□□ 0.27
ACTN1-209ENST00000553659 SLC20A1Q8WUM9 679 aa16.72■□□□□ 0.27
ACTN1-209ENST00000553659 TATDN2Q93075 761 aa16.72■□□□□ 0.27
ACTN1-209ENST00000553659 NME7Q9Y5B8 376 aa16.72■□□□□ 0.27
ACTN1-209ENST00000553659 CPQQ9Y646 472 aa16.72■□□□□ 0.27
ACTN1-209ENST00000553659 A0A0A0MRY4 1105 aa16.71■□□□□ 0.27
ACTN1-209ENST00000553659 ASS1P00966 412 aaKnown RBP16.71■□□□□ 0.27
ACTN1-209ENST00000553659 OAS1P00973 400 aaKnown RBP16.71■□□□□ 0.27
ACTN1-209ENST00000553659 CHRNB2P17787 502 aa16.71■□□□□ 0.27
ACTN1-209ENST00000553659 PTPN1P18031 435 aaKnown RBP16.71■□□□□ 0.27
ACTN1-209ENST00000553659 BCKDHBP21953 392 aa16.71■□□□□ 0.27
ACTN1-209ENST00000553659 EIF2DP41214 584 aaKnown RBP16.71■□□□□ 0.27
ACTN1-209ENST00000553659 SLC6A11P48066 632 aa16.71■□□□□ 0.27
ACTN1-209ENST00000553659 NOVA1P51513 510 aaKnown RBP16.71■□□□□ 0.27
ACTN1-209ENST00000553659 TAF10Q12962 218 aa16.71■□□□□ 0.27
ACTN1-209ENST00000553659 CLEC16AQ2KHT3 1053 aa16.71■□□□□ 0.27
ACTN1-209ENST00000553659 HSF5Q4G112 596 aaPredicted RBP16.71■□□□□ 0.27
ACTN1-209ENST00000553659 ACAD10Q6JQN1 1059 aa16.71■□□□□ 0.27
ACTN1-209ENST00000553659 TMEM92Q6UXU6 159 aa16.71■□□□□ 0.27
ACTN1-209ENST00000553659 SLC47A2Q86VL8 602 aa16.71■□□□□ 0.27
ACTN1-209ENST00000553659 MDGA1Q8NFP4 955 aa16.71■□□□□ 0.27
ACTN1-209ENST00000553659 ACTRT1Q8TDG2 376 aa16.71■□□□□ 0.27
ACTN1-209ENST00000553659 COG1Q8WTW3 980 aa16.71■□□□□ 0.27
ACTN1-209ENST00000553659 SLITRK1Q96PX8 696 aa16.71■□□□□ 0.27
ACTN1-209ENST00000553659 PNKPQ96T60 521 aa16.71■□□□□ 0.27
ACTN1-209ENST00000553659 NAP1L3Q99457 506 aaPredicted RBP16.71■□□□□ 0.27
ACTN1-209ENST00000553659 NIF3L1Q9GZT8 377 aa16.71■□□□□ 0.27
ACTN1-209ENST00000553659 THAP2Q9H0W7 228 aa16.71■□□□□ 0.27
ACTN1-209ENST00000553659 CTTNBP2NLQ9P2B4 639 aa16.71■□□□□ 0.27
ACTN1-209ENST00000553659 LCMT1Q9UIC8 334 aa16.71■□□□□ 0.27
ACTN1-209ENST00000553659 TMCO5BA8MYB1 307 aa16.7■□□□□ 0.26
ACTN1-209ENST00000553659 ZNF185O15231 689 aa16.7■□□□□ 0.26
ACTN1-209ENST00000553659 ALDH1A2O94788 518 aa16.7■□□□□ 0.26
ACTN1-209ENST00000553659 APODP05090 189 aa16.7■□□□□ 0.26
ACTN1-209ENST00000553659 CYP1A2P05177 515 aa16.7■□□□□ 0.26
ACTN1-209ENST00000553659 ACO1P21399 889 aaKnown RBP16.7■□□□□ 0.26
ACTN1-209ENST00000553659 ABCB4P21439 1286 aa16.7■□□□□ 0.26
ACTN1-209ENST00000553659 ATICP31939 592 aa16.7■□□□□ 0.26
ACTN1-209ENST00000553659 TNNC1P63316 161 aa16.7■□□□□ 0.26
ACTN1-209ENST00000553659 PPP2R5EQ16537 467 aa16.7■□□□□ 0.26
ACTN1-209ENST00000553659 WDR72Q3MJ13 1102 aa16.7■□□□□ 0.26
ACTN1-209ENST00000553659 RHBDF2Q6PJF5 856 aa16.7■□□□□ 0.26
ACTN1-209ENST00000553659 CYP2U1Q7Z449 544 aa16.7■□□□□ 0.26
ACTN1-209ENST00000553659 NT5DC3Q86UY8 548 aa16.7■□□□□ 0.26
ACTN1-209ENST00000553659 DDX42Q86XP3 938 aaKnown RBP eCLIP16.7■□□□□ 0.26
ACTN1-209ENST00000553659 TTC39CQ8N584 583 aa16.7■□□□□ 0.26
ACTN1-209ENST00000553659 NOA1Q8NC60 698 aaKnown RBP16.7■□□□□ 0.26
ACTN1-209ENST00000553659 HES6Q96HZ4 224 aa16.7■□□□□ 0.26
ACTN1-209ENST00000553659 VCPIP1Q96JH7 1222 aa16.7■□□□□ 0.26
ACTN1-209ENST00000553659 ELOVL4Q9GZR5 314 aa16.7■□□□□ 0.26
ACTN1-209ENST00000553659 TMEM9BQ9NQ34 198 aa16.7■□□□□ 0.26
ACTN1-209ENST00000553659 SMPD4Q9NXE4 827 aa16.7■□□□□ 0.26
ACTN1-209ENST00000553659 OGFRQ9NZT2 677 aa16.7■□□□□ 0.26
ACTN1-209ENST00000553659 CFAP97Q9P2B7 532 aa16.7■□□□□ 0.26
ACTN1-209ENST00000553659 TBC1D14Q9P2M4 693 aa16.7■□□□□ 0.26
ACTN1-209ENST00000553659 TTC7AQ9ULT0 858 aaPredicted RBP16.7■□□□□ 0.26
ACTN1-209ENST00000553659 PCDHB4Q9Y5E5 795 aa16.7■□□□□ 0.26
ACTN1-209ENST00000553659 ASCC3Q8N3C0 2202 aaKnown RBP16.7■□□□□ 0.26
ACTN1-209ENST00000553659 GON4LQ3T8J9 2241 aa16.69■□□□□ 0.26
ACTN1-209ENST00000553659 PCNX2A6NKB5 2137 aa16.69■□□□□ 0.26
ACTN1-209ENST00000553659 CCDC188H7C350 402 aa16.69■□□□□ 0.26
ACTN1-209ENST00000553659 CDX4O14627 284 aaPredicted RBP16.69■□□□□ 0.26
ACTN1-209ENST00000553659 GIPC1O14908 333 aa16.69■□□□□ 0.26
ACTN1-209ENST00000553659 KAT7O95251 611 aa16.69■□□□□ 0.26
ACTN1-209ENST00000553659 KLF8O95600 359 aaPredicted RBP16.69■□□□□ 0.26
ACTN1-209ENST00000553659 ADH1CP00326 375 aa16.69■□□□□ 0.26
ACTN1-209ENST00000553659 MMEP08473 750 aa16.69■□□□□ 0.26
ACTN1-209ENST00000553659 RHOXF2BP0C7M4 288 aa16.69■□□□□ 0.26
ACTN1-209ENST00000553659 MBL2P11226 248 aaPredicted RBP16.69■□□□□ 0.26
ACTN1-209ENST00000553659 CHRM1P11229 460 aaPredicted RBP16.69■□□□□ 0.26
ACTN1-209ENST00000553659 P4HA1P13674 534 aa16.69■□□□□ 0.26
ACTN1-209ENST00000553659 HNRNPLP14866 589 aaKnown RBP eCLIP16.69■□□□□ 0.26
ACTN1-209ENST00000553659 TIE1P35590 1138 aa16.69■□□□□ 0.26
ACTN1-209ENST00000553659 DHPSP49366 369 aaPredicted RBP16.69■□□□□ 0.26
ACTN1-209ENST00000553659 CACNA2D1P54289 1103 aa16.69■□□□□ 0.26
ACTN1-209ENST00000553659 IRX4P78413 519 aa16.69■□□□□ 0.26
ACTN1-209ENST00000553659 TAF3Q5VWG9 929 aa16.69■□□□□ 0.26
ACTN1-209ENST00000553659 TTC30AQ86WT1 665 aa16.69■□□□□ 0.26
ACTN1-209ENST00000553659 NUP93Q8N1F7 819 aa16.69■□□□□ 0.26
ACTN1-209ENST00000553659 ALLCQ8N6M5 410 aa16.69■□□□□ 0.26
ACTN1-209ENST00000553659 UBL4BQ8N7F7 174 aa16.69■□□□□ 0.26
ACTN1-209ENST00000553659 IL17RCQ8NAC3 791 aa16.69■□□□□ 0.26
ACTN1-209ENST00000553659 TXNDC5Q8NBS9 432 aaKnown RBP16.69■□□□□ 0.26
ACTN1-209ENST00000553659 PCDHB18PQ96TA0 734 aa16.69■□□□□ 0.26
ACTN1-209ENST00000553659 RHOXF2Q9BQY4 288 aa16.69■□□□□ 0.26
ACTN1-209ENST00000553659 B3GNT5Q9BYG0 378 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms