RNA–Protein interactions for RNA: ENST00000553527.1

TDP1-205, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-205ENST00000553527 FAM160A2Q8N612 972 aaPredicted RBP24.51■■□□□ 1.51
TDP1-205ENST00000553527 SLC20A1Q8WUM9 679 aa24.51■■□□□ 1.51
TDP1-205ENST00000553527 HMGB4Q8WW32 186 aa24.51■■□□□ 1.51
TDP1-205ENST00000553527 CPA5Q8WXQ8 436 aa24.51■■□□□ 1.51
TDP1-205ENST00000553527 FAM204AQ9H8W3 233 aa24.51■■□□□ 1.51
TDP1-205ENST00000553527 CACNA2D2Q9NY47 1150 aa24.51■■□□□ 1.51
TDP1-205ENST00000553527 STOML2Q9UJZ1 356 aa24.51■■□□□ 1.51
TDP1-205ENST00000553527 SLC27A6Q9Y2P4 619 aa24.51■■□□□ 1.51
TDP1-205ENST00000553527 GPR179Q6PRD1 2367 aa24.51■■□□□ 1.51
TDP1-205ENST00000553527 ABCA7Q8IZY2 2146 aa24.5■■□□□ 1.51
TDP1-205ENST00000553527 TCRBV21S2A2A0A5A6 115 aa24.5■■□□□ 1.51
TDP1-205ENST00000553527 WASH3PC4AMC7 463 aa24.5■■□□□ 1.51
TDP1-205ENST00000553527 HSF2BPO75031 334 aa24.5■■□□□ 1.51
TDP1-205ENST00000553527 STAT1P42224 750 aa24.5■■□□□ 1.51
TDP1-205ENST00000553527 ARID5AQ03989 594 aa24.5■■□□□ 1.51
TDP1-205ENST00000553527 FAM133BQ5BKY9 247 aaKnown RBP24.5■■□□□ 1.51
TDP1-205ENST00000553527 LAIR1Q6GTX8 287 aa24.5■■□□□ 1.51
TDP1-205ENST00000553527 NADSYN1Q6IA69 706 aa24.5■■□□□ 1.51
TDP1-205ENST00000553527 OLFML1Q6UWY5 402 aa24.5■■□□□ 1.51
TDP1-205ENST00000553527 EPS8L1Q8TE68 723 aa24.5■■□□□ 1.51
TDP1-205ENST00000553527 RNF34Q969K3 372 aa24.5■■□□□ 1.51
TDP1-205ENST00000553527 C18orf8Q96DM3 657 aa24.5■■□□□ 1.51
TDP1-205ENST00000553527 SLC39A13Q96H72 371 aa24.5■■□□□ 1.51
TDP1-205ENST00000553527 SLC2A11Q9BYW1 496 aa24.5■■□□□ 1.51
TDP1-205ENST00000553527 CIPCQ9C0C6 399 aa24.5■■□□□ 1.51
TDP1-205ENST00000553527 XPO7Q9UIA9 1087 aaKnown RBP24.5■■□□□ 1.51
TDP1-205ENST00000553527 THADAQ6YHU6 1953 aa24.5■■□□□ 1.51
TDP1-205ENST00000553527 ITIH6Q6UXX5 1313 aa24.5■■□□□ 1.51
TDP1-205ENST00000553527 IRAK2O43187 625 aa24.49■■□□□ 1.51
TDP1-205ENST00000553527 APOEP02649 317 aa24.49■■□□□ 1.51
TDP1-205ENST00000553527 GLI1P08151 1106 aa24.49■■□□□ 1.51
TDP1-205ENST00000553527 GBP1P32455 592 aa24.49■■□□□ 1.51
TDP1-205ENST00000553527 JAM2P57087 298 aa24.49■■□□□ 1.51
TDP1-205ENST00000553527 USP39Q53GS9 565 aaKnown RBP24.49■■□□□ 1.51
TDP1-205ENST00000553527 PIK3R6Q5UE93 754 aa24.49■■□□□ 1.51
TDP1-205ENST00000553527 NAA35Q5VZE5 725 aa24.49■■□□□ 1.51
TDP1-205ENST00000553527 ANKS1BQ7Z6G8 1248 aa24.49■■□□□ 1.51
TDP1-205ENST00000553527 RASSF3Q86WH2 238 aa24.49■■□□□ 1.51
TDP1-205ENST00000553527 AZIN2Q96A70 460 aa24.49■■□□□ 1.51
TDP1-205ENST00000553527 DDX50Q9BQ39 737 aaKnown RBP24.49■■□□□ 1.51
TDP1-205ENST00000553527 NUP58Q9BVL2 599 aa24.49■■□□□ 1.51
TDP1-205ENST00000553527 ASNSD1Q9NWL6 643 aa24.49■■□□□ 1.51
TDP1-205ENST00000553527 DDIT4Q9NX09 232 aa24.49■■□□□ 1.51
TDP1-205ENST00000553527 RAD54BQ9Y620 910 aa24.49■■□□□ 1.51
TDP1-205ENST00000553527 CDH5P33151 784 aaPredicted RBP24.48■■□□□ 1.51
TDP1-205ENST00000553527 SPEM2Q0P670 501 aa24.48■■□□□ 1.51
TDP1-205ENST00000553527 NME3Q13232 169 aa24.48■■□□□ 1.51
TDP1-205ENST00000553527 NNTQ13423 1086 aa24.48■■□□□ 1.51
TDP1-205ENST00000553527 FIGNQ5HY92 759 aa24.48■■□□□ 1.51
TDP1-205ENST00000553527 CFAP52Q8N1V2 620 aa24.48■■□□□ 1.51
TDP1-205ENST00000553527 UCMAQ8WVF2 138 aa24.48■■□□□ 1.51
TDP1-205ENST00000553527 RLN3Q8WXF3 142 aa24.48■■□□□ 1.51
TDP1-205ENST00000553527 SORCS1Q8WY21 1168 aa24.48■■□□□ 1.51
TDP1-205ENST00000553527 IQCDQ96DY2 449 aa24.48■■□□□ 1.51
TDP1-205ENST00000553527 MYEOVQ96EZ4 313 aa24.48■■□□□ 1.51
TDP1-205ENST00000553527 SLC2A13Q96QE2 648 aa24.48■■□□□ 1.51
TDP1-205ENST00000553527 NUCKS1Q9H1E3 243 aaKnown RBP24.48■■□□□ 1.51
TDP1-205ENST00000553527 USP18Q9UMW8 372 aa24.48■■□□□ 1.51
TDP1-205ENST00000553527 GOLGA8SH3BPF8 625 aa24.47■■□□□ 1.51
TDP1-205ENST00000553527 GFRA2O00451 464 aa24.47■■□□□ 1.51
TDP1-205ENST00000553527 HLA-FP30511 346 aa24.47■■□□□ 1.51
TDP1-205ENST00000553527 RAP1GAP2Q684P5 730 aa24.47■■□□□ 1.51
TDP1-205ENST00000553527 SPECC1LQ69YQ0 1117 aa24.47■■□□□ 1.51
TDP1-205ENST00000553527 VSTM4Q8IW00 320 aa24.47■■□□□ 1.51
TDP1-205ENST00000553527 TTYH3Q9C0H2 523 aa24.47■■□□□ 1.51
TDP1-205ENST00000553527 ABCB8Q9NUT2 735 aa24.47■■□□□ 1.51
TDP1-205ENST00000553527 SLTMQ9NWH9 1034 aaKnown RBP eCLIP24.47■■□□□ 1.51
TDP1-205ENST00000553527 ELOVL2Q9NXB9 296 aa24.47■■□□□ 1.51
TDP1-205ENST00000553527 NOCTQ9UK39 431 aaKnown RBP24.47■■□□□ 1.51
TDP1-205ENST00000553527 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP24.47■■□□□ 1.51
TDP1-205ENST00000553527 STON1Q9Y6Q2 735 aa24.47■■□□□ 1.51
TDP1-205ENST00000553527 TYW5A2RUC4 315 aaKnown RBP24.46■■□□□ 1.51
TDP1-205ENST00000553527 M0QYT0 321 aa24.46■■□□□ 1.51
TDP1-205ENST00000553527 ZBTB24O43167 697 aaPredicted RBP24.46■■□□□ 1.51
TDP1-205ENST00000553527 IGLV3-25P01717 112 aa24.46■■□□□ 1.51
TDP1-205ENST00000553527 RETP07949 1114 aa24.46■■□□□ 1.51
TDP1-205ENST00000553527 CHRNB2P17787 502 aa24.46■■□□□ 1.51
TDP1-205ENST00000553527 ZNF75DP51815 510 aa24.46■■□□□ 1.51
TDP1-205ENST00000553527 RPS24P62847 133 aaKnown RBP24.46■■□□□ 1.51
TDP1-205ENST00000553527 CDR2Q01850 454 aa24.46■■□□□ 1.51
TDP1-205ENST00000553527 FAM102AQ5T9C2 384 aaPredicted RBP24.46■■□□□ 1.51
TDP1-205ENST00000553527 TMEM215Q68D42 235 aa24.46■■□□□ 1.51
TDP1-205ENST00000553527 KIAA1211LQ6NV74 962 aa24.46■■□□□ 1.51
TDP1-205ENST00000553527 CHST9Q7L1S5 443 aa24.46■■□□□ 1.51
TDP1-205ENST00000553527 SLC26A9Q7LBE3 791 aa24.46■■□□□ 1.51
TDP1-205ENST00000553527 PHLDB2Q86SQ0 1253 aa24.46■■□□□ 1.51
TDP1-205ENST00000553527 ZNF677Q86XU0 584 aa24.46■■□□□ 1.51
TDP1-205ENST00000553527 ZDHHC17Q8IUH5 632 aa24.46■■□□□ 1.51
TDP1-205ENST00000553527 LGI2Q8N0V4 545 aa24.46■■□□□ 1.51
TDP1-205ENST00000553527 CARNMT1Q8N4J0 409 aa24.46■■□□□ 1.51
TDP1-205ENST00000553527 ATP6V0D2Q8N8Y2 350 aa24.46■■□□□ 1.51
TDP1-205ENST00000553527 EDEM3Q9BZQ6 932 aa24.46■■□□□ 1.51
TDP1-205ENST00000553527 SLC12A6Q9UHW9 1150 aa24.46■■□□□ 1.51
TDP1-205ENST00000553527 A0A1W2PQF6 199 aa24.45■■□□□ 1.5
TDP1-205ENST00000553527 A0A1W2PQJ5 194 aa24.45■■□□□ 1.5
TDP1-205ENST00000553527 DAB1O75553 588 aa24.45■■□□□ 1.5
TDP1-205ENST00000553527 LSM8O95777 96 aaKnown RBP24.45■■□□□ 1.5
TDP1-205ENST00000553527 NOS2P35228 1153 aa24.45■■□□□ 1.5
TDP1-205ENST00000553527 NOMO3P69849 1222 aa24.45■■□□□ 1.5
TDP1-205ENST00000553527 CCDC6Q16204 474 aa24.45■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms