RNA–Protein interactions for RNA: ENST00000553447.6

PSEN1-206, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-206ENST00000553447 LRIG2O94898 1065 aa18.18■□□□□ 0.5
PSEN1-206ENST00000553447 MOCS2O96007 188 aaPredicted RBP18.18■□□□□ 0.5
PSEN1-206ENST00000553447 RING1Q06587 406 aa18.18■□□□□ 0.5
PSEN1-206ENST00000553447 PTK6Q13882 451 aa18.18■□□□□ 0.5
PSEN1-206ENST00000553447 PPP1R7Q15435 360 aa18.18■□□□□ 0.5
PSEN1-206ENST00000553447 PPM1LQ5SGD2 360 aa18.18■□□□□ 0.5
PSEN1-206ENST00000553447 DUPD1Q68J44 220 aa18.18■□□□□ 0.5
PSEN1-206ENST00000553447 RTL10Q7L3V2 364 aa18.18■□□□□ 0.5
PSEN1-206ENST00000553447 TMC8Q8IU68 726 aa18.18■□□□□ 0.5
PSEN1-206ENST00000553447 ELMOD1Q8N336 334 aa18.18■□□□□ 0.5
PSEN1-206ENST00000553447 ALLCQ8N6M5 410 aa18.18■□□□□ 0.5
PSEN1-206ENST00000553447 ATP6V0D2Q8N8Y2 350 aa18.18■□□□□ 0.5
PSEN1-206ENST00000553447 SLC22A17Q8WUG5 538 aa18.18■□□□□ 0.5
PSEN1-206ENST00000553447 LRRC3Q9BY71 257 aa18.18■□□□□ 0.5
PSEN1-206ENST00000553447 NACA2Q9H009 215 aa18.18■□□□□ 0.5
PSEN1-206ENST00000553447 CERS4Q9HA82 394 aa18.18■□□□□ 0.5
PSEN1-206ENST00000553447 ETNK2Q9NVF9 386 aa18.18■□□□□ 0.5
PSEN1-206ENST00000553447 NEU2Q9Y3R4 380 aa18.18■□□□□ 0.5
PSEN1-206ENST00000553447 HEY1Q9Y5J3 304 aa18.18■□□□□ 0.5
PSEN1-206ENST00000553447 DOCK4Q8N1I0 1966 aa18.18■□□□□ 0.5
PSEN1-206ENST00000553447 DCLK1O15075 740 aa18.17■□□□□ 0.5
PSEN1-206ENST00000553447 ERLIN1O75477 346 aa18.17■□□□□ 0.5
PSEN1-206ENST00000553447 OAS1P00973 400 aaKnown RBP18.17■□□□□ 0.5
PSEN1-206ENST00000553447 HMBSP08397 361 aa18.17■□□□□ 0.5
PSEN1-206ENST00000553447 RBP3P10745 1247 aa18.17■□□□□ 0.5
PSEN1-206ENST00000553447 HTR7P34969 479 aa18.17■□□□□ 0.5
PSEN1-206ENST00000553447 GGCXP38435 758 aa18.17■□□□□ 0.5
PSEN1-206ENST00000553447 NR2C2P49116 596 aa18.17■□□□□ 0.5
PSEN1-206ENST00000553447 CLCN6P51797 869 aa18.17■□□□□ 0.5
PSEN1-206ENST00000553447 NRG1Q02297 640 aaPredicted RBP18.17■□□□□ 0.5
PSEN1-206ENST00000553447 GBE1Q04446 702 aa18.17■□□□□ 0.5
PSEN1-206ENST00000553447 CUL1Q13616 776 aa18.17■□□□□ 0.5
PSEN1-206ENST00000553447 PAFAH1B3Q15102 231 aaKnown RBP18.17■□□□□ 0.5
PSEN1-206ENST00000553447 TRADDQ15628 312 aa18.17■□□□□ 0.5
PSEN1-206ENST00000553447 PABPC1LQ4VXU2 614 aaKnown RBP18.17■□□□□ 0.5
PSEN1-206ENST00000553447 MANEALQ5VSG8 457 aa18.17■□□□□ 0.5
PSEN1-206ENST00000553447 PPP2R2DQ66LE6 453 aa18.17■□□□□ 0.5
PSEN1-206ENST00000553447 C1orf74Q96LT6 269 aa18.17■□□□□ 0.5
PSEN1-206ENST00000553447 SIK2Q9H0K1 926 aa18.17■□□□□ 0.5
PSEN1-206ENST00000553447 DPH5Q9H2P9 285 aa18.17■□□□□ 0.5
PSEN1-206ENST00000553447 MAN1C1Q9NR34 630 aa18.17■□□□□ 0.5
PSEN1-206ENST00000553447 FAM114A2Q9NRY5 505 aa18.17■□□□□ 0.5
PSEN1-206ENST00000553447 SLC12A6Q9UHW9 1150 aa18.17■□□□□ 0.5
PSEN1-206ENST00000553447 XPO7Q9UIA9 1087 aaKnown RBP18.17■□□□□ 0.5
PSEN1-206ENST00000553447 MFHAS1Q9Y4C4 1052 aa18.17■□□□□ 0.5
PSEN1-206ENST00000553447 HS3ST4Q9Y661 456 aa18.17■□□□□ 0.5
PSEN1-206ENST00000553447 HELZP42694 1942 aaKnown RBP18.16■□□□□ 0.5
PSEN1-206ENST00000553447 CCL16O15467 120 aa18.16■□□□□ 0.5
PSEN1-206ENST00000553447 MYBL2P10244 700 aa18.16■□□□□ 0.5
PSEN1-206ENST00000553447 EPCAMP16422 314 aa18.16■□□□□ 0.5
PSEN1-206ENST00000553447 ERCC2P18074 760 aa18.16■□□□□ 0.5
PSEN1-206ENST00000553447 HOXC13P31276 330 aa18.16■□□□□ 0.5
PSEN1-206ENST00000553447 CARSP49589 748 aaKnown RBP18.16■□□□□ 0.5
PSEN1-206ENST00000553447 DRG2P55039 364 aaKnown RBP18.16■□□□□ 0.5
PSEN1-206ENST00000553447 SLC10A2Q12908 348 aaPredicted RBP18.16■□□□□ 0.5
PSEN1-206ENST00000553447 MTA1Q13330 715 aa18.16■□□□□ 0.5
PSEN1-206ENST00000553447 PIK3R6Q5UE93 754 aa18.16■□□□□ 0.5
PSEN1-206ENST00000553447 NUGGCQ68CJ6 796 aa18.16■□□□□ 0.5
PSEN1-206ENST00000553447 GSTA5Q7RTV2 222 aa18.16■□□□□ 0.5
PSEN1-206ENST00000553447 DDX42Q86XP3 938 aaKnown RBP eCLIP18.16■□□□□ 0.5
PSEN1-206ENST00000553447 GSPT2Q8IYD1 628 aaKnown RBP18.16■□□□□ 0.5
PSEN1-206ENST00000553447 HS6ST3Q8IZP7 471 aa18.16■□□□□ 0.5
PSEN1-206ENST00000553447 EIF1ADQ8N9N8 165 aaKnown RBP18.16■□□□□ 0.5
PSEN1-206ENST00000553447 HNRNPLLQ8WVV9 542 aaKnown RBP18.16■□□□□ 0.5
PSEN1-206ENST00000553447 IFT81Q8WYA0 676 aa18.16■□□□□ 0.5
PSEN1-206ENST00000553447 BTN2A3PQ96KV6 586 aa18.16■□□□□ 0.5
PSEN1-206ENST00000553447 TMEM121Q9BTD3 319 aa18.16■□□□□ 0.5
PSEN1-206ENST00000553447 TRIM31Q9BZY9 425 aa18.16■□□□□ 0.5
PSEN1-206ENST00000553447 LMAN2LQ9H0V9 348 aa18.16■□□□□ 0.5
PSEN1-206ENST00000553447 NEU3Q9UQ49 428 aa18.16■□□□□ 0.5
PSEN1-206ENST00000553447 C2orf78A6NCI8 922 aa18.15■□□□□ 0.5
PSEN1-206ENST00000553447 H7C0C1 242 aa18.15■□□□□ 0.5
PSEN1-206ENST00000553447 SGK1O00141 431 aa18.15■□□□□ 0.5
PSEN1-206ENST00000553447 MFSD11O43934 449 aa18.15■□□□□ 0.5
PSEN1-206ENST00000553447 KRT14P02533 472 aa18.15■□□□□ 0.5
PSEN1-206ENST00000553447 GABRR2P28476 465 aa18.15■□□□□ 0.5
PSEN1-206ENST00000553447 EPHB2P29323 1055 aa18.15■□□□□ 0.5
PSEN1-206ENST00000553447 HOXA9P31269 272 aa18.15■□□□□ 0.5
PSEN1-206ENST00000553447 BMP8BP34820 402 aa18.15■□□□□ 0.5
PSEN1-206ENST00000553447 RPL21P46778 160 aaKnown RBP18.15■□□□□ 0.5
PSEN1-206ENST00000553447 ATP5OP48047 213 aa18.15■□□□□ 0.5
PSEN1-206ENST00000553447 MLLT6P55198 1093 aaPredicted RBP18.15■□□□□ 0.5
PSEN1-206ENST00000553447 COG7P83436 770 aa18.15■□□□□ 0.5
PSEN1-206ENST00000553447 XRCC4Q13426 336 aa18.15■□□□□ 0.5
PSEN1-206ENST00000553447 ARTNQ5T4W7 220 aa18.15■□□□□ 0.5
PSEN1-206ENST00000553447 DARS2Q6PI48 645 aaKnown RBP18.15■□□□□ 0.5
PSEN1-206ENST00000553447 TMCO3Q6UWJ1 677 aa18.15■□□□□ 0.5
PSEN1-206ENST00000553447 ZC3H18Q86VM9 953 aaKnown RBP18.15■□□□□ 0.5
PSEN1-206ENST00000553447 UNC45BQ8IWX7 931 aa18.15■□□□□ 0.5
PSEN1-206ENST00000553447 ARNTL2Q8WYA1 636 aa18.15■□□□□ 0.5
PSEN1-206ENST00000553447 PLD4Q96BZ4 506 aa18.15■□□□□ 0.5
PSEN1-206ENST00000553447 TBC1D31Q96DN5 1066 aa18.15■□□□□ 0.5
PSEN1-206ENST00000553447 KLF16Q9BXK1 252 aaPredicted RBP18.15■□□□□ 0.5
PSEN1-206ENST00000553447 RNF38Q9H0F5 515 aa18.15■□□□□ 0.5
PSEN1-206ENST00000553447 C10orf88Q9H8K7 445 aa18.15■□□□□ 0.5
PSEN1-206ENST00000553447 DTLQ9NZJ0 730 aa18.15■□□□□ 0.5
PSEN1-206ENST00000553447 ASIC3Q9UHC3 531 aa18.15■□□□□ 0.5
PSEN1-206ENST00000553447 SNX24Q9Y343 169 aa18.15■□□□□ 0.5
PSEN1-206ENST00000553447 E9PAM4 449 aa18.14■□□□□ 0.49
PSEN1-206ENST00000553447 FGF10O15520 208 aaPredicted RBP18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms