RNA–Protein interactions for RNA: ENST00000553427.5

CPSF2-202, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 715 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-202ENST00000553427 KLHL30Q0D2K2 578 aa19.14■□□□□ 0.65
CPSF2-202ENST00000553427 TRIM14Q14142 442 aa19.14■□□□□ 0.65
CPSF2-202ENST00000553427 MS4A13Q5J8X5 152 aa19.14■□□□□ 0.65
CPSF2-202ENST00000553427 BRMS1LQ5PSV4 323 aa19.14■□□□□ 0.65
CPSF2-202ENST00000553427 C10orf76Q5T2E6 689 aa19.14■□□□□ 0.65
CPSF2-202ENST00000553427 ACAD10Q6JQN1 1059 aa19.14■□□□□ 0.65
CPSF2-202ENST00000553427 TRNP1Q6NT89 227 aa19.14■□□□□ 0.65
CPSF2-202ENST00000553427 ZNF571Q7Z3V5 609 aaPredicted RBP19.14■□□□□ 0.65
CPSF2-202ENST00000553427 TRMT11Q7Z4G4 463 aaKnown RBP19.14■□□□□ 0.65
CPSF2-202ENST00000553427 ZBTB44Q8NCP5 570 aa19.14■□□□□ 0.65
CPSF2-202ENST00000553427 PRICKLE1Q96MT3 831 aaPredicted RBP19.14■□□□□ 0.65
CPSF2-202ENST00000553427 ADAM33Q9BZ11 813 aa19.14■□□□□ 0.65
CPSF2-202ENST00000553427 METTL5Q9NRN9 209 aaKnown RBP19.14■□□□□ 0.65
CPSF2-202ENST00000553427 C2orf42Q9NWW7 574 aa19.14■□□□□ 0.65
CPSF2-202ENST00000553427 ZSCAN32Q9NX65 697 aa19.14■□□□□ 0.65
CPSF2-202ENST00000553427 MMP17Q9ULZ9 603 aa19.14■□□□□ 0.65
CPSF2-202ENST00000553427 CCDC163A0A0D9SF12 145 aa19.13■□□□□ 0.65
CPSF2-202ENST00000553427 TCRBV5S1A1TA0A578 114 aa19.13■□□□□ 0.65
CPSF2-202ENST00000553427 MOCS2O96007 188 aaPredicted RBP19.13■□□□□ 0.65
CPSF2-202ENST00000553427 GZMAP12544 262 aa19.13■□□□□ 0.65
CPSF2-202ENST00000553427 ABCB4P21439 1286 aa19.13■□□□□ 0.65
CPSF2-202ENST00000553427 SULT1E1P49888 294 aa19.13■□□□□ 0.65
CPSF2-202ENST00000553427 EIF4HQ15056 248 aaKnown RBP19.13■□□□□ 0.65
CPSF2-202ENST00000553427 ACBD5Q5T8D3 534 aaPredicted RBP19.13■□□□□ 0.65
CPSF2-202ENST00000553427 HGSNATQ68CP4 663 aa19.13■□□□□ 0.65
CPSF2-202ENST00000553427 SPECC1LQ69YQ0 1117 aa19.13■□□□□ 0.65
CPSF2-202ENST00000553427 RFWD3Q6PCD5 774 aa19.13■□□□□ 0.65
CPSF2-202ENST00000553427 SARM1Q6SZW1 724 aa19.13■□□□□ 0.65
CPSF2-202ENST00000553427 ANKS1BQ7Z6G8 1248 aa19.13■□□□□ 0.65
CPSF2-202ENST00000553427 CAMKK1Q8N5S9 505 aa19.13■□□□□ 0.65
CPSF2-202ENST00000553427 DDX51Q8N8A6 666 aaKnown RBP eCLIP19.13■□□□□ 0.65
CPSF2-202ENST00000553427 FAM122AQ96E09 287 aa19.13■□□□□ 0.65
CPSF2-202ENST00000553427 PRMT1Q99873 361 aaKnown RBP19.13■□□□□ 0.65
CPSF2-202ENST00000553427 SEMA4AQ9H3S1 761 aa19.13■□□□□ 0.65
CPSF2-202ENST00000553427 PIGVQ9NUD9 493 aa19.13■□□□□ 0.65
CPSF2-202ENST00000553427 ARHGEF38Q9NXL2 777 aa19.13■□□□□ 0.65
CPSF2-202ENST00000553427 CALCOCO1Q9P1Z2 691 aa19.13■□□□□ 0.65
CPSF2-202ENST00000553427 XPO7Q9UIA9 1087 aaKnown RBP19.13■□□□□ 0.65
CPSF2-202ENST00000553427 LUC7L2Q9Y383 392 aaKnown RBP19.13■□□□□ 0.65
CPSF2-202ENST00000553427 VPS13AQ96RL7 3174 aa19.13■□□□□ 0.65
CPSF2-202ENST00000553427 DMDP11532 3685 aa19.12■□□□□ 0.65
CPSF2-202ENST00000553427 GOLGA6L7A0A1B0GV03 622 aa19.12■□□□□ 0.65
CPSF2-202ENST00000553427 TYW5A2RUC4 315 aaKnown RBP19.12■□□□□ 0.65
CPSF2-202ENST00000553427 C2CD4BA6NLJ0 364 aa19.12■□□□□ 0.65
CPSF2-202ENST00000553427 NPC1O15118 1278 aa19.12■□□□□ 0.65
CPSF2-202ENST00000553427 TSPAN3O60637 253 aa19.12■□□□□ 0.65
CPSF2-202ENST00000553427 ENDOD1O94919 500 aa19.12■□□□□ 0.65
CPSF2-202ENST00000553427 HNRNPH3P31942 346 aaKnown RBP19.12■□□□□ 0.65
CPSF2-202ENST00000553427 PTPN9P43378 593 aa19.12■□□□□ 0.65
CPSF2-202ENST00000553427 SGSHP51688 502 aa19.12■□□□□ 0.65
CPSF2-202ENST00000553427 SEC13P55735 322 aa19.12■□□□□ 0.65
CPSF2-202ENST00000553427 NME3Q13232 169 aa19.12■□□□□ 0.65
CPSF2-202ENST00000553427 DMC1Q14565 340 aa19.12■□□□□ 0.65
CPSF2-202ENST00000553427 E2F5Q15329 346 aa19.12■□□□□ 0.65
CPSF2-202ENST00000553427 C2orf27AQ580R0 203 aa19.12■□□□□ 0.65
CPSF2-202ENST00000553427 TTC39BQ5VTQ0 682 aaPredicted RBP19.12■□□□□ 0.65
CPSF2-202ENST00000553427 TSSK4Q6SA08 328 aa19.12■□□□□ 0.65
CPSF2-202ENST00000553427 SND1Q7KZF4 910 aaKnown RBP eCLIP19.12■□□□□ 0.65
CPSF2-202ENST00000553427 CHSY1Q86X52 802 aa19.12■□□□□ 0.65
CPSF2-202ENST00000553427 MCOLN2Q8IZK6 566 aa19.12■□□□□ 0.65
CPSF2-202ENST00000553427 IL17RCQ8NAC3 791 aa19.12■□□□□ 0.65
CPSF2-202ENST00000553427 WFIKKN2Q8TEU8 576 aa19.12■□□□□ 0.65
CPSF2-202ENST00000553427 TBCBQ99426 244 aa19.12■□□□□ 0.65
CPSF2-202ENST00000553427 CLEC4EQ9ULY5 219 aa19.12■□□□□ 0.65
CPSF2-202ENST00000553427 SLC8A2Q9UPR5 921 aa19.12■□□□□ 0.65
CPSF2-202ENST00000553427 MYO15AQ9UKN7 3530 aa19.12■□□□□ 0.65
CPSF2-202ENST00000553427 FANCMQ8IYD8 2048 aa19.12■□□□□ 0.65
CPSF2-202ENST00000553427 SYNJ2BP-COX16A0A087WUM0 186 aa19.11■□□□□ 0.65
CPSF2-202ENST00000553427 FAM170AA1A519 330 aa19.11■□□□□ 0.65
CPSF2-202ENST00000553427 SIGLEC16A6NMB1 481 aa19.11■□□□□ 0.65
CPSF2-202ENST00000553427 PRRT4C9JH25 899 aa19.11■□□□□ 0.65
CPSF2-202ENST00000553427 DDX3XO00571 662 aaKnown RBP eCLIP19.11■□□□□ 0.653e-12■■■■□ 21.2
CPSF2-202ENST00000553427 LILRB5O75023 590 aa19.11■□□□□ 0.65
CPSF2-202ENST00000553427 SERPING1P05155 500 aa19.11■□□□□ 0.65
CPSF2-202ENST00000553427 KRT3P12035 628 aa19.11■□□□□ 0.65
CPSF2-202ENST00000553427 HNRNPLP14866 589 aaKnown RBP eCLIP19.11■□□□□ 0.65
CPSF2-202ENST00000553427 TFE3P19532 575 aaPredicted RBP19.11■□□□□ 0.65
CPSF2-202ENST00000553427 TACR2P21452 398 aa19.11■□□□□ 0.65
CPSF2-202ENST00000553427 RDXP35241 583 aaKnown RBP19.11■□□□□ 0.65
CPSF2-202ENST00000553427 DEUP1Q05D60 604 aa19.11■□□□□ 0.65
CPSF2-202ENST00000553427 ARID5BQ14865 1188 aa19.11■□□□□ 0.65
CPSF2-202ENST00000553427 EOGTQ5NDL2 527 aa19.11■□□□□ 0.65
CPSF2-202ENST00000553427 PPP1R15BQ5SWA1 713 aa19.11■□□□□ 0.65
CPSF2-202ENST00000553427 KIAA0907Q7Z7F0 614 aaPredicted RBP19.11■□□□□ 0.65
CPSF2-202ENST00000553427 VSTM4Q8IW00 320 aa19.11■□□□□ 0.65
CPSF2-202ENST00000553427 ZNF513Q8N8E2 541 aaPredicted RBP19.11■□□□□ 0.65
CPSF2-202ENST00000553427 RNF34Q969K3 372 aa19.11■□□□□ 0.65
CPSF2-202ENST00000553427 FAM86C1Q9NVL1 165 aa19.11■□□□□ 0.65
CPSF2-202ENST00000553427 TAS2R14Q9NYV8 317 aa19.11■□□□□ 0.65
CPSF2-202ENST00000553427 COX16Q9P0S2 106 aa19.11■□□□□ 0.65
CPSF2-202ENST00000553427 HCN2Q9UL51 889 aa19.11■□□□□ 0.65
CPSF2-202ENST00000553427 F5H5T6 163 aa19.1■□□□□ 0.65
CPSF2-202ENST00000553427 TIMM44O43615 452 aa19.1■□□□□ 0.65
CPSF2-202ENST00000553427 TBL1XO60907 577 aa19.1■□□□□ 0.65
CPSF2-202ENST00000553427 HLA-FP30511 346 aa19.1■□□□□ 0.65
CPSF2-202ENST00000553427 SDC4P31431 198 aa19.1■□□□□ 0.65
CPSF2-202ENST00000553427 TIE1P35590 1138 aa19.1■□□□□ 0.65
CPSF2-202ENST00000553427 DGKEP52429 567 aa19.1■□□□□ 0.65
CPSF2-202ENST00000553427 GEN1Q17RS7 908 aa19.1■□□□□ 0.65
CPSF2-202ENST00000553427 RAP1GAP2Q684P5 730 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms