RNA–Protein interactions for RNA: ENST00000553099.5

RAB3IP-218, Transcript of RAB3A interacting protein, humanhuman

TSL 2 BASIC

Gene RAB3IP, Length 2,674 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-218ENST00000553099 RABGEF1Q9UJ41 708 aa9.38□□□□□ -0.91
RAB3IP-218ENST00000553099 ADAM28Q9UKQ2 775 aa9.38□□□□□ -0.91
RAB3IP-218ENST00000553099 MAD1L1Q9Y6D9 718 aa9.38□□□□□ -0.91
RAB3IP-218ENST00000553099 MRPL42Q9Y6G3 142 aaKnown RBP9.38□□□□□ -0.91
RAB3IP-218ENST00000553099 ENPP3O14638 875 aa9.37□□□□□ -0.91
RAB3IP-218ENST00000553099 GCATO75600 419 aa9.37□□□□□ -0.91
RAB3IP-218ENST00000553099 DGKIO75912 1065 aa9.37□□□□□ -0.91
RAB3IP-218ENST00000553099 VIMP08670 466 aaKnown RBP9.37□□□□□ -0.91
RAB3IP-218ENST00000553099 GPR15P49685 360 aa9.37□□□□□ -0.91
RAB3IP-218ENST00000553099 AIF1P55008 147 aa9.37□□□□□ -0.91
RAB3IP-218ENST00000553099 CCL23P55773 120 aa9.37□□□□□ -0.91
RAB3IP-218ENST00000553099 FAM189BP81408 668 aa9.37□□□□□ -0.91
RAB3IP-218ENST00000553099 PDK1Q15118 436 aa9.37□□□□□ -0.91
RAB3IP-218ENST00000553099 QPCTQ16769 361 aa9.37□□□□□ -0.91
RAB3IP-218ENST00000553099 DDR2Q16832 855 aa9.37□□□□□ -0.91
RAB3IP-218ENST00000553099 KLHL38Q2WGJ6 581 aa9.37□□□□□ -0.91
RAB3IP-218ENST00000553099 CTXN3Q4LDR2 81 aa9.37□□□□□ -0.91
RAB3IP-218ENST00000553099 VARS2Q5ST30 1063 aaKnown RBP9.37□□□□□ -0.91
RAB3IP-218ENST00000553099 RWDD4Q6NW29 188 aaKnown RBP9.37□□□□□ -0.91
RAB3IP-218ENST00000553099 DCP1BQ8IZD4 617 aaKnown RBP9.37□□□□□ -0.91
RAB3IP-218ENST00000553099 GPR152Q8TDT2 470 aa9.37□□□□□ -0.91
RAB3IP-218ENST00000553099 DEPDC1BQ8WUY9 529 aa9.37□□□□□ -0.91
RAB3IP-218ENST00000553099 PGAP3Q96FM1 320 aaPredicted RBP9.37□□□□□ -0.91
RAB3IP-218ENST00000553099 CHMP6Q96FZ7 201 aa9.37□□□□□ -0.91
RAB3IP-218ENST00000553099 EPAS1Q99814 870 aa9.37□□□□□ -0.91
RAB3IP-218ENST00000553099 PPP1R12CQ9BZL4 782 aa9.37□□□□□ -0.91
RAB3IP-218ENST00000553099 PNPLA8Q9NP80 782 aa9.37□□□□□ -0.91
RAB3IP-218ENST00000553099 PIH1D1Q9NWS0 290 aaKnown RBP9.37□□□□□ -0.91
RAB3IP-218ENST00000553099 EURLQ9NYK6 297 aa9.37□□□□□ -0.91
RAB3IP-218ENST00000553099 A0A0A0MRY4 1105 aa9.37□□□□□ -0.91
RAB3IP-218ENST00000553099 TCRBV9S1A1TA0A576 114 aa9.37□□□□□ -0.91
RAB3IP-218ENST00000553099 C5orf60A6NFR6 353 aa9.37□□□□□ -0.91
RAB3IP-218ENST00000553099 HACD1B0YJ81 288 aa9.37□□□□□ -0.91
RAB3IP-218ENST00000553099 DNM1LO00429 736 aa9.37□□□□□ -0.91
RAB3IP-218ENST00000553099 DCLK1O15075 740 aa9.37□□□□□ -0.91
RAB3IP-218ENST00000553099 MOCS2O96007 188 aaPredicted RBP9.37□□□□□ -0.91
RAB3IP-218ENST00000553099 CPB1P15086 417 aa9.37□□□□□ -0.91
RAB3IP-218ENST00000553099 GRIA1P42261 906 aa9.37□□□□□ -0.91
RAB3IP-218ENST00000553099 PGFP49763 221 aa9.37□□□□□ -0.91
RAB3IP-218ENST00000553099 SCAPQ12770 1279 aa9.37□□□□□ -0.91
RAB3IP-218ENST00000553099 DEFB128Q7Z7B8 93 aa9.37□□□□□ -0.91
RAB3IP-218ENST00000553099 TRABD2AQ86V40 505 aa9.37□□□□□ -0.91
RAB3IP-218ENST00000553099 CAND1Q86VP6 1230 aaKnown RBP9.37□□□□□ -0.91
RAB3IP-218ENST00000553099 AGGF1Q8N302 714 aaeCLIP9.37□□□□□ -0.91
RAB3IP-218ENST00000553099 COLGALT1Q8NBJ5 622 aa9.37□□□□□ -0.91
RAB3IP-218ENST00000553099 SEPT8Q92599 483 aa9.37□□□□□ -0.91
RAB3IP-218ENST00000553099 CENPTQ96BT3 561 aa9.37□□□□□ -0.91
RAB3IP-218ENST00000553099 SPATA13Q96N96 652 aa9.37□□□□□ -0.91
RAB3IP-218ENST00000553099 TRIM56Q9BRZ2 755 aaKnown RBP9.37□□□□□ -0.91
RAB3IP-218ENST00000553099 RNF208Q9H0X6 261 aa9.37□□□□□ -0.91
RAB3IP-218ENST00000553099 TRABDQ9H4I3 376 aa9.37□□□□□ -0.91
RAB3IP-218ENST00000553099 ACSS3Q9H6R3 686 aa9.37□□□□□ -0.91
RAB3IP-218ENST00000553099 NKIRAS1Q9NYS0 192 aa9.37□□□□□ -0.91
RAB3IP-218ENST00000553099 ZC3H7BQ9UGR2 993 aaKnown RBP9.37□□□□□ -0.91
RAB3IP-218ENST00000553099 ZMYND8Q9ULU4 1186 aaPredicted RBP9.37□□□□□ -0.91
RAB3IP-218ENST00000553099 TEX264Q9Y6I9 313 aa9.37□□□□□ -0.91
RAB3IP-218ENST00000553099 IKBKGQ9Y6K9 419 aa9.37□□□□□ -0.91
RAB3IP-218ENST00000553099 TMEM189-UBE2V1I3L0A0 370 aa9.36□□□□□ -0.91
RAB3IP-218ENST00000553099 LRIG2O94898 1065 aa9.36□□□□□ -0.91
RAB3IP-218ENST00000553099 CPP00450 1065 aa9.36□□□□□ -0.91
RAB3IP-218ENST00000553099 STX2P32856 288 aa9.36□□□□□ -0.91
RAB3IP-218ENST00000553099 MSH2P43246 934 aa9.36□□□□□ -0.91
RAB3IP-218ENST00000553099 CXCR3P49682 368 aa9.36□□□□□ -0.91
RAB3IP-218ENST00000553099 CDK7P50613 346 aa9.36□□□□□ -0.91
RAB3IP-218ENST00000553099 PRMT2P55345 433 aa9.36□□□□□ -0.91
RAB3IP-218ENST00000553099 MPP2Q14168 576 aa9.36□□□□□ -0.91
RAB3IP-218ENST00000553099 GPNMBQ14956 572 aa9.36□□□□□ -0.91
RAB3IP-218ENST00000553099 KBTBD12Q3ZCT8 623 aa9.36□□□□□ -0.91
RAB3IP-218ENST00000553099 PLEKHG4Q58EX7 1191 aa9.36□□□□□ -0.91
RAB3IP-218ENST00000553099 CASC4Q6P4E1 433 aa9.36□□□□□ -0.91
RAB3IP-218ENST00000553099 C4orf22Q6V702 233 aa9.36□□□□□ -0.91
RAB3IP-218ENST00000553099 PDZD4Q76G19 769 aaPredicted RBP9.36□□□□□ -0.91
RAB3IP-218ENST00000553099 CTAGE3PQ8IX95 158 aa9.36□□□□□ -0.91
RAB3IP-218ENST00000553099 TTC9BQ8N6N2 239 aa9.36□□□□□ -0.91
RAB3IP-218ENST00000553099 NPWQ8N729 165 aa9.36□□□□□ -0.91
RAB3IP-218ENST00000553099 PDCD7Q8N8D1 485 aaKnown RBP9.36□□□□□ -0.91
RAB3IP-218ENST00000553099 ATAD1Q8NBU5 361 aa9.36□□□□□ -0.91
RAB3IP-218ENST00000553099 MAML1Q92585 1016 aa9.36□□□□□ -0.91
RAB3IP-218ENST00000553099 CELF6Q96J87 481 aaKnown RBP9.36□□□□□ -0.91
RAB3IP-218ENST00000553099 SMC6Q96SB8 1091 aa9.36□□□□□ -0.91
RAB3IP-218ENST00000553099 GPR62Q9BZJ7 368 aa9.36□□□□□ -0.91
RAB3IP-218ENST00000553099 ZCWPW1Q9H0M4 648 aa9.36□□□□□ -0.91
RAB3IP-218ENST00000553099 ABCC13Q9NSE7 274 aa9.36□□□□□ -0.91
RAB3IP-218ENST00000553099 KLHL8Q9P2G9 620 aaPredicted RBP9.36□□□□□ -0.91
RAB3IP-218ENST00000553099 SLC24A2Q9UI40 661 aa9.36□□□□□ -0.91
RAB3IP-218ENST00000553099 FNDC1Q4ZHG4 1894 aaPredicted RBP9.36□□□□□ -0.91
RAB3IP-218ENST00000553099 A0A1W2PPM1 405 aa9.36□□□□□ -0.91
RAB3IP-218ENST00000553099 A0A1W2PQH9 124 aa9.36□□□□□ -0.91
RAB3IP-218ENST00000553099 SRRM3A6NNA2 597 aaPredicted RBP9.36□□□□□ -0.91
RAB3IP-218ENST00000553099 TBKBP1A7MCY6 615 aa9.36□□□□□ -0.91
RAB3IP-218ENST00000553099 SOAT2O75908 522 aa9.36□□□□□ -0.91
RAB3IP-218ENST00000553099 UPP2O95045 317 aa9.36□□□□□ -0.91
RAB3IP-218ENST00000553099 OAZ2O95190 189 aa9.36□□□□□ -0.91
RAB3IP-218ENST00000553099 PSMB4P28070 264 aa9.36□□□□□ -0.91
RAB3IP-218ENST00000553099 NR1H3Q13133 447 aa9.36□□□□□ -0.91
RAB3IP-218ENST00000553099 SEMA3BQ13214 749 aa9.36□□□□□ -0.91
RAB3IP-218ENST00000553099 PAFAH1B3Q15102 231 aaKnown RBP9.36□□□□□ -0.91
RAB3IP-218ENST00000553099 PRKD1Q15139 912 aaPredicted RBP9.36□□□□□ -0.91
RAB3IP-218ENST00000553099 NFE2Q16621 373 aaPredicted RBP9.36□□□□□ -0.91
RAB3IP-218ENST00000553099 ZNF280DQ6N043 979 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms