RNA–Protein interactions for RNA: ENST00000553011.5

PTCH1-226, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 1,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-226ENST00000553011 RPL7AP62424 266 aaKnown RBP14.64□□□□□ -0.07
PTCH1-226ENST00000553011 MTAPQ13126 283 aa14.64□□□□□ -0.07
PTCH1-226ENST00000553011 PPP2R5DQ14738 602 aa14.64□□□□□ -0.07
PTCH1-226ENST00000553011 C15orf59Q2T9L4 293 aaPredicted RBP14.64□□□□□ -0.07
PTCH1-226ENST00000553011 CCDC14Q49A88 953 aa14.64□□□□□ -0.07
PTCH1-226ENST00000553011 MPPE1Q53F39 396 aa14.64□□□□□ -0.07
PTCH1-226ENST00000553011 PPP1R15BQ5SWA1 713 aa14.64□□□□□ -0.07
PTCH1-226ENST00000553011 SH3PXD2AQ5TCZ1 1133 aa14.64□□□□□ -0.07
PTCH1-226ENST00000553011 PIK3R6Q5UE93 754 aa14.64□□□□□ -0.07
PTCH1-226ENST00000553011 RAP1GAP2Q684P5 730 aa14.64□□□□□ -0.07
PTCH1-226ENST00000553011 GRAMD4Q6IC98 578 aa14.64□□□□□ -0.07
PTCH1-226ENST00000553011 BNIPLQ7Z465 357 aa14.64□□□□□ -0.07
PTCH1-226ENST00000553011 VPS36Q86VN1 386 aa14.64□□□□□ -0.07
PTCH1-226ENST00000553011 CHSY1Q86X52 802 aa14.64□□□□□ -0.07
PTCH1-226ENST00000553011 ATP6V0D2Q8N8Y2 350 aa14.64□□□□□ -0.07
PTCH1-226ENST00000553011 PRSS33Q8NF86 280 aa14.64□□□□□ -0.07
PTCH1-226ENST00000553011 TMA16Q96EY4 203 aaKnown RBP14.64□□□□□ -0.07
PTCH1-226ENST00000553011 PGAP3Q96FM1 320 aaPredicted RBP14.64□□□□□ -0.07
PTCH1-226ENST00000553011 MRFAP1L1Q96HT8 127 aa14.64□□□□□ -0.07
PTCH1-226ENST00000553011 VCPIP1Q96JH7 1222 aa14.64□□□□□ -0.07
PTCH1-226ENST00000553011 BTN2A3PQ96KV6 586 aa14.64□□□□□ -0.07
PTCH1-226ENST00000553011 PRICKLE1Q96MT3 831 aaPredicted RBP14.64□□□□□ -0.07
PTCH1-226ENST00000553011 ANLNQ9NQW6 1124 aa14.64□□□□□ -0.07
PTCH1-226ENST00000553011 SPATA6Q9NWH7 488 aaPredicted RBP14.64□□□□□ -0.07
PTCH1-226ENST00000553011 FANCMQ8IYD8 2048 aa14.64□□□□□ -0.07
PTCH1-226ENST00000553011 WDFY4Q6ZS81 3184 aa14.64□□□□□ -0.07
PTCH1-226ENST00000553011 AKR1B15C9JRZ8 316 aaPredicted RBP14.63□□□□□ -0.07
PTCH1-226ENST00000553011 I6L893 689 aaPredicted RBP14.63□□□□□ -0.07
PTCH1-226ENST00000553011 F9P00740 461 aa14.63□□□□□ -0.07
PTCH1-226ENST00000553011 CISD3P0C7P0 127 aa14.63□□□□□ -0.07
PTCH1-226ENST00000553011 ABCB4P21439 1286 aa14.63□□□□□ -0.07
PTCH1-226ENST00000553011 TACR2P21452 398 aa14.63□□□□□ -0.07
PTCH1-226ENST00000553011 GPD1P21695 349 aa14.63□□□□□ -0.07
PTCH1-226ENST00000553011 HOXD9P28356 352 aaPredicted RBP14.63□□□□□ -0.07
PTCH1-226ENST00000553011 GGCXP38435 758 aa14.63□□□□□ -0.07
PTCH1-226ENST00000553011 GRIA2P42262 883 aa14.63□□□□□ -0.07
PTCH1-226ENST00000553011 DGKGP49619 791 aa14.63□□□□□ -0.07
PTCH1-226ENST00000553011 SEC13P55735 322 aa14.63□□□□□ -0.07
PTCH1-226ENST00000553011 CDO1Q16878 200 aa14.63□□□□□ -0.07
PTCH1-226ENST00000553011 MS4A13Q5J8X5 152 aa14.63□□□□□ -0.07
PTCH1-226ENST00000553011 DRC7Q8IY82 874 aa14.63□□□□□ -0.07
PTCH1-226ENST00000553011 LGI2Q8N0V4 545 aa14.63□□□□□ -0.07
PTCH1-226ENST00000553011 SYNPOQ8N3V7 929 aa14.63□□□□□ -0.07
PTCH1-226ENST00000553011 TERB1Q8NA31 727 aa14.63□□□□□ -0.07
PTCH1-226ENST00000553011 ZNF653Q96CK0 615 aa14.63□□□□□ -0.07
PTCH1-226ENST00000553011 MCEEQ96PE7 176 aa14.63□□□□□ -0.07
PTCH1-226ENST00000553011 ISCUQ9H1K1 167 aa14.63□□□□□ -0.07
PTCH1-226ENST00000553011 TMPRSS4Q9NRS4 437 aa14.63□□□□□ -0.07
PTCH1-226ENST00000553011 C2orf42Q9NWW7 574 aa14.63□□□□□ -0.07
PTCH1-226ENST00000553011 CNOT8Q9UFF9 292 aaKnown RBP14.63□□□□□ -0.07
PTCH1-226ENST00000553011 SLC12A6Q9UHW9 1150 aa14.63□□□□□ -0.07
PTCH1-226ENST00000553011 FBXO10Q9UK96 956 aa14.63□□□□□ -0.07
PTCH1-226ENST00000553011 A0A0A0MRY4 1105 aa14.62□□□□□ -0.07
PTCH1-226ENST00000553011 TBC1D3BA6NDS4 549 aa14.62□□□□□ -0.07
PTCH1-226ENST00000553011 TBL1XO60907 577 aa14.62□□□□□ -0.07
PTCH1-226ENST00000553011 PAGE1O75459 146 aa14.62□□□□□ -0.07
PTCH1-226ENST00000553011 ENDOD1O94919 500 aa14.62□□□□□ -0.07
PTCH1-226ENST00000553011 RDXP35241 583 aaKnown RBP14.62□□□□□ -0.07
PTCH1-226ENST00000553011 PTPN9P43378 593 aa14.62□□□□□ -0.07
PTCH1-226ENST00000553011 NUBP1P53384 320 aa14.62□□□□□ -0.07
PTCH1-226ENST00000553011 RPS24P62847 133 aaKnown RBP14.62□□□□□ -0.07
PTCH1-226ENST00000553011 OGDHQ02218 1023 aa14.62□□□□□ -0.07
PTCH1-226ENST00000553011 MAMLD1Q13495 774 aa14.62□□□□□ -0.07
PTCH1-226ENST00000553011 TSR1Q2NL82 804 aaKnown RBP14.62□□□□□ -0.07
PTCH1-226ENST00000553011 FBXO43Q4G163 708 aa14.62□□□□□ -0.07
PTCH1-226ENST00000553011 BRMS1LQ5PSV4 323 aa14.62□□□□□ -0.07
PTCH1-226ENST00000553011 C10orf76Q5T2E6 689 aa14.62□□□□□ -0.07
PTCH1-226ENST00000553011 EMC10Q5UCC4 262 aa14.62□□□□□ -0.07
PTCH1-226ENST00000553011 PLEKHA7Q6IQ23 1121 aa14.62□□□□□ -0.07
PTCH1-226ENST00000553011 DCUN1D2Q6PH85 259 aa14.62□□□□□ -0.07
PTCH1-226ENST00000553011 SND1Q7KZF4 910 aaKnown RBP eCLIP14.62□□□□□ -0.07
PTCH1-226ENST00000553011 FAM131BQ86XD5 332 aa14.62□□□□□ -0.07
PTCH1-226ENST00000553011 CNGA4Q8IV77 575 aa14.62□□□□□ -0.07
PTCH1-226ENST00000553011 C1orf210Q8IVY1 113 aa14.62□□□□□ -0.07
PTCH1-226ENST00000553011 CFAP52Q8N1V2 620 aa14.62□□□□□ -0.07
PTCH1-226ENST00000553011 HJURPQ8NCD3 748 aaPredicted RBP14.62□□□□□ -0.07
PTCH1-226ENST00000553011 CHP1Q99653 195 aa14.62□□□□□ -0.07
PTCH1-226ENST00000553011 PRMT1Q99873 361 aaKnown RBP14.62□□□□□ -0.07
PTCH1-226ENST00000553011 DDX50Q9BQ39 737 aaKnown RBP14.62□□□□□ -0.07
PTCH1-226ENST00000553011 TKTL2Q9H0I9 626 aa14.62□□□□□ -0.07
PTCH1-226ENST00000553011 WDCPQ9H6R7 721 aa14.62□□□□□ -0.07
PTCH1-226ENST00000553011 POLR3BQ9NW08 1133 aaPredicted RBP14.62□□□□□ -0.07
PTCH1-226ENST00000553011 ZNHIT6Q9NWK9 470 aaKnown RBP14.62□□□□□ -0.07
PTCH1-226ENST00000553011 ARHGEF38Q9NXL2 777 aa14.62□□□□□ -0.07
PTCH1-226ENST00000553011 STIM2Q9P246 746 aa14.62□□□□□ -0.07
PTCH1-226ENST00000553011 NENFQ9UMX5 172 aa14.62□□□□□ -0.07
PTCH1-226ENST00000553011 HCN4Q9Y3Q4 1203 aa14.62□□□□□ -0.07
PTCH1-226ENST00000553011 SNX10Q9Y5X0 201 aa14.62□□□□□ -0.07
PTCH1-226ENST00000553011 PRRT4C9JH25 899 aa14.61□□□□□ -0.07
PTCH1-226ENST00000553011 CCP110O43303 1012 aa14.61□□□□□ -0.07
PTCH1-226ENST00000553011 CHRM1P11229 460 aaPredicted RBP14.61□□□□□ -0.07
PTCH1-226ENST00000553011 ZNF143P52747 638 aaPredicted RBP14.61□□□□□ -0.07
PTCH1-226ENST00000553011 HDAC4P56524 1084 aa14.61□□□□□ -0.07
PTCH1-226ENST00000553011 GFPT1Q06210 699 aaPredicted RBP14.61□□□□□ -0.07
PTCH1-226ENST00000553011 TCF15Q12870 199 aa14.61□□□□□ -0.07
PTCH1-226ENST00000553011 MAPK8IP2Q13387 824 aaPredicted RBP14.61□□□□□ -0.07
PTCH1-226ENST00000553011 ANGPT1Q15389 498 aa14.61□□□□□ -0.07
PTCH1-226ENST00000553011 ASTE1Q2TB18 679 aaPredicted RBP14.61□□□□□ -0.07
PTCH1-226ENST00000553011 C2orf27AQ580R0 203 aa14.61□□□□□ -0.07
PTCH1-226ENST00000553011 CCDC122Q5T0U0 273 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms