RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 DKK1O94907 266 aa12.38□□□□□ -0.43
CKAP4-202ENST00000552828 HMBSP08397 361 aa12.38□□□□□ -0.43
CKAP4-202ENST00000552828 PRKCHP24723 683 aa12.38□□□□□ -0.43
CKAP4-202ENST00000552828 STX17P56962 302 aa12.38□□□□□ -0.43
CKAP4-202ENST00000552828 YWHAGP61981 247 aaKnown RBP eCLIP12.38□□□□□ -0.43
CKAP4-202ENST00000552828 SCAPQ12770 1279 aa12.38□□□□□ -0.43
CKAP4-202ENST00000552828 CAMK2GQ13555 558 aaPredicted RBP12.38□□□□□ -0.43
CKAP4-202ENST00000552828 ZNF394Q53GI3 561 aa12.38□□□□□ -0.43
CKAP4-202ENST00000552828 TTI2Q6NXR4 508 aa12.38□□□□□ -0.43
CKAP4-202ENST00000552828 BHLHA9Q7RTU4 235 aa12.38□□□□□ -0.43
CKAP4-202ENST00000552828 SLCO6A1Q86UG4 719 aa12.38□□□□□ -0.43
CKAP4-202ENST00000552828 GAREM1Q9H706 876 aa12.38□□□□□ -0.43
CKAP4-202ENST00000552828 IL21RQ9HBE5 538 aa12.38□□□□□ -0.43
CKAP4-202ENST00000552828 DACH1Q9UI36 760 aa12.38□□□□□ -0.43
CKAP4-202ENST00000552828 RWDD2AQ9UIY3 292 aa12.38□□□□□ -0.43
CKAP4-202ENST00000552828 APOBEC2Q9Y235 224 aaKnown RBP12.38□□□□□ -0.43
CKAP4-202ENST00000552828 GPSM3Q9Y4H4 160 aa12.38□□□□□ -0.43
CKAP4-202ENST00000552828 ADAMTS9Q9P2N4 1935 aa12.38□□□□□ -0.43
CKAP4-202ENST00000552828 SLC12A8A0AV02 714 aa12.37□□□□□ -0.43
CKAP4-202ENST00000552828 STX10O60499 249 aa12.37□□□□□ -0.43
CKAP4-202ENST00000552828 FGFR1OPO95684 399 aaKnown RBP12.37□□□□□ -0.43
CKAP4-202ENST00000552828 CER1O95813 267 aa12.37□□□□□ -0.43
CKAP4-202ENST00000552828 ZBED1O96006 694 aa12.37□□□□□ -0.43
CKAP4-202ENST00000552828 EPHX1P07099 455 aa12.37□□□□□ -0.43
CKAP4-202ENST00000552828 PTMSP20962 102 aa12.37□□□□□ -0.43
CKAP4-202ENST00000552828 HOXD9P28356 352 aaPredicted RBP12.37□□□□□ -0.43
CKAP4-202ENST00000552828 SLC8A3P57103 927 aa12.37□□□□□ -0.43
CKAP4-202ENST00000552828 ZNF445P59923 1031 aa12.37□□□□□ -0.43
CKAP4-202ENST00000552828 HLA-BQ31612 363 aa12.37□□□□□ -0.43
CKAP4-202ENST00000552828 MPPE1Q53F39 396 aa12.37□□□□□ -0.43
CKAP4-202ENST00000552828 CCDC183Q5T5S1 534 aa12.37□□□□□ -0.43
CKAP4-202ENST00000552828 RSRC2Q7L4I2 434 aaKnown RBP12.37□□□□□ -0.43
CKAP4-202ENST00000552828 KIAA0907Q7Z7F0 614 aaPredicted RBP12.37□□□□□ -0.43
CKAP4-202ENST00000552828 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.37□□□□□ -0.43
CKAP4-202ENST00000552828 PNPLA1Q8N8W4 532 aa12.37□□□□□ -0.43
CKAP4-202ENST00000552828 FBXL13Q8NEE6 735 aa12.37□□□□□ -0.43
CKAP4-202ENST00000552828 OR2T3Q8NH03 318 aa12.37□□□□□ -0.43
CKAP4-202ENST00000552828 DDI1Q8WTU0 396 aa12.37□□□□□ -0.43
CKAP4-202ENST00000552828 SORCS1Q8WY21 1168 aa12.37□□□□□ -0.43
CKAP4-202ENST00000552828 CIPCQ9C0C6 399 aa12.37□□□□□ -0.43
CKAP4-202ENST00000552828 MIR1-1HGQ9H1L0 117 aa12.37□□□□□ -0.43
CKAP4-202ENST00000552828 TMEM245Q9H330 911 aa12.37□□□□□ -0.43
CKAP4-202ENST00000552828 METTL14Q9HCE5 456 aaKnown RBP12.37□□□□□ -0.43
CKAP4-202ENST00000552828 OSGEPQ9NPF4 335 aa12.37□□□□□ -0.43
CKAP4-202ENST00000552828 TM7SF3Q9NS93 570 aa12.37□□□□□ -0.43
CKAP4-202ENST00000552828 RAB20Q9NX57 234 aa12.37□□□□□ -0.43
CKAP4-202ENST00000552828 ARMCX3Q9UH62 379 aaPredicted RBP12.37□□□□□ -0.43
CKAP4-202ENST00000552828 EIF2B4Q9UI10 523 aaKnown RBP12.37□□□□□ -0.43
CKAP4-202ENST00000552828 FNDC3AQ9Y2H6 1198 aaKnown RBP12.37□□□□□ -0.43
CKAP4-202ENST00000552828 HBS1LQ9Y450 684 aaKnown RBP12.37□□□□□ -0.43
CKAP4-202ENST00000552828 LATS1O95835 1130 aa12.36□□□□□ -0.43
CKAP4-202ENST00000552828 GNA14O95837 355 aa12.36□□□□□ -0.43
CKAP4-202ENST00000552828 ACADMP11310 421 aa12.36□□□□□ -0.43
CKAP4-202ENST00000552828 HLA-FP30511 346 aa12.36□□□□□ -0.43
CKAP4-202ENST00000552828 MATKP42679 507 aa12.36□□□□□ -0.43
CKAP4-202ENST00000552828 HARS2P49590 506 aaKnown RBP12.36□□□□□ -0.43
CKAP4-202ENST00000552828 AFF3P51826 1226 aaKnown RBP12.36□□□□□ -0.43
CKAP4-202ENST00000552828 TKTL1P51854 596 aa12.36□□□□□ -0.43
CKAP4-202ENST00000552828 DPCR1Q3MIW9 517 aa12.36□□□□□ -0.43
CKAP4-202ENST00000552828 CCDC40Q4G0X9 1142 aa12.36□□□□□ -0.43
CKAP4-202ENST00000552828 CT47A1Q5JQC4 288 aaPredicted RBP12.36□□□□□ -0.43
CKAP4-202ENST00000552828 TCERG1LQ5VWI1 586 aa12.36□□□□□ -0.43
CKAP4-202ENST00000552828 SASS6Q6UVJ0 657 aa12.36□□□□□ -0.43
CKAP4-202ENST00000552828 SERPINA13PQ6UXR4 307 aa12.36□□□□□ -0.43
CKAP4-202ENST00000552828 RBM43Q6ZSC3 357 aaKnown RBP12.36□□□□□ -0.43
CKAP4-202ENST00000552828 FMNL3Q8IVF7 1028 aa12.36□□□□□ -0.43
CKAP4-202ENST00000552828 SETD7Q8WTS6 366 aaKnown RBP12.36□□□□□ -0.43
CKAP4-202ENST00000552828 CDC6Q99741 560 aa12.36□□□□□ -0.43
CKAP4-202ENST00000552828 ARID3AQ99856 593 aa12.36□□□□□ -0.43
CKAP4-202ENST00000552828 SRRTQ9BXP5 876 aaKnown RBP12.36□□□□□ -0.43
CKAP4-202ENST00000552828 MMRN2Q9H8L6 949 aa12.36□□□□□ -0.43
CKAP4-202ENST00000552828 OLA1Q9NTK5 396 aaKnown RBP12.36□□□□□ -0.43
CKAP4-202ENST00000552828 TOR4AQ9NXH8 423 aa12.36□□□□□ -0.43
CKAP4-202ENST00000552828 LOC400499M0QZD8 3231 aa12.36□□□□□ -0.43
CKAP4-202ENST00000552828 TULP2O00295 520 aa12.35□□□□□ -0.43
CKAP4-202ENST00000552828 XPO1O14980 1071 aaKnown RBP12.35□□□□□ -0.43
CKAP4-202ENST00000552828 FLRT2O43155 660 aa12.35□□□□□ -0.43
CKAP4-202ENST00000552828 ERCC5P28715 1186 aaPredicted RBP12.35□□□□□ -0.43
CKAP4-202ENST00000552828 MXI1P50539 228 aa12.35□□□□□ -0.43
CKAP4-202ENST00000552828 ZBTB16Q05516 673 aa12.35□□□□□ -0.43
CKAP4-202ENST00000552828 PTPRNQ16849 979 aa12.35□□□□□ -0.43
CKAP4-202ENST00000552828 DCAF17Q5H9S7 520 aaPredicted RBP12.35□□□□□ -0.43
CKAP4-202ENST00000552828 ADGRF1Q5T601 910 aa12.35□□□□□ -0.43
CKAP4-202ENST00000552828 TMPRSS7Q7RTY8 843 aa12.35□□□□□ -0.43
CKAP4-202ENST00000552828 ADIPOR2Q86V24 386 aa12.35□□□□□ -0.43
CKAP4-202ENST00000552828 SCML4Q8N228 414 aa12.35□□□□□ -0.43
CKAP4-202ENST00000552828 WFIKKN2Q8TEU8 576 aa12.35□□□□□ -0.43
CKAP4-202ENST00000552828 KCTD13Q8WZ19 329 aa12.35□□□□□ -0.43
CKAP4-202ENST00000552828 TATDN2Q93075 761 aa12.35□□□□□ -0.43
CKAP4-202ENST00000552828 IRX2Q9BZI1 471 aaPredicted RBP12.35□□□□□ -0.43
CKAP4-202ENST00000552828 ULBP1Q9BZM6 244 aa12.35□□□□□ -0.43
CKAP4-202ENST00000552828 LHX5Q9H2C1 402 aa12.35□□□□□ -0.43
CKAP4-202ENST00000552828 CCDC86Q9H6F5 360 aaKnown RBP12.35□□□□□ -0.43
CKAP4-202ENST00000552828 C6orf106Q9H6K1 298 aaPredicted RBP12.35□□□□□ -0.43
CKAP4-202ENST00000552828 FBRSQ9HAH7 460 aa12.35□□□□□ -0.43
CKAP4-202ENST00000552828 DKK4Q9UBT3 224 aa12.35□□□□□ -0.43
CKAP4-202ENST00000552828 PLA2G4CQ9UP65 541 aa12.35□□□□□ -0.43
CKAP4-202ENST00000552828 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.35□□□□□ -0.43
CKAP4-202ENST00000552828 COQ4Q9Y3A0 265 aa12.35□□□□□ -0.43
CKAP4-202ENST00000552828 SLCO1B1Q9Y6L6 691 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms