RNA–Protein interactions for RNA: ENST00000552480.1

CACNB3-223, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, human

TSL 3

Gene CACNB3, Length 927 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNB3-223	ENST00000552480	FCRL2	Q96LA5	508 aa	Predicted RBP	13.12	□□□□□ -0.31
CACNB3-223	ENST00000552480	OLFM3	Q96PB7	478 aa		13.12	□□□□□ -0.31
CACNB3-223	ENST00000552480	TXLNGY	Q9BZA5	131 aa		13.12	□□□□□ -0.31
CACNB3-223	ENST00000552480	FOXP3	Q9BZS1	431 aa		13.12	□□□□□ -0.31
CACNB3-223	ENST00000552480	TSPYL1	Q9H0U9	437 aa		13.12	□□□□□ -0.31
CACNB3-223	ENST00000552480	C10orf88	Q9H8K7	445 aa		13.12	□□□□□ -0.31
CACNB3-223	ENST00000552480	DTL	Q9NZJ0	730 aa		13.12	□□□□□ -0.31
CACNB3-223	ENST00000552480	OGFR	Q9NZT2	677 aa		13.12	□□□□□ -0.31
CACNB3-223	ENST00000552480	NUDT5	Q9UKK9	219 aa		13.12	□□□□□ -0.31
CACNB3-223	ENST00000552480	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	13.12	□□□□□ -0.31
CACNB3-223	ENST00000552480	MAGED2	Q9UNF1	606 aa	Predicted RBP	13.12	□□□□□ -0.31
CACNB3-223	ENST00000552480	LZTS1	Q9Y250	596 aa		13.12	□□□□□ -0.31
CACNB3-223	ENST00000552480	RWDD3	Q9Y3V2	267 aa		13.12	□□□□□ -0.31
CACNB3-223	ENST00000552480	MFHAS1	Q9Y4C4	1052 aa		13.12	□□□□□ -0.31
CACNB3-223	ENST00000552480	KIAA0100	Q14667	2235 aa	Known RBP	13.12	□□□□□ -0.31
CACNB3-223	ENST00000552480	TRBV21OR9-2	A0A075B6F4	123 aa	Predicted RBP	13.11	□□□□□ -0.31
CACNB3-223	ENST00000552480	TEX28	O15482	410 aa		13.11	□□□□□ -0.31
CACNB3-223	ENST00000552480	PAGE1	O75459	146 aa		13.11	□□□□□ -0.31
CACNB3-223	ENST00000552480	ZNF189	O75820	626 aa	Predicted RBP	13.11	□□□□□ -0.31
CACNB3-223	ENST00000552480	APOE	P02649	317 aa		13.11	□□□□□ -0.31
CACNB3-223	ENST00000552480	HMGA1	P17096	107 aa	Known RBP	13.11	□□□□□ -0.31
CACNB3-223	ENST00000552480	ERCC2	P18074	760 aa		13.11	□□□□□ -0.31
CACNB3-223	ENST00000552480	HOXC13	P31276	330 aa		13.11	□□□□□ -0.31
CACNB3-223	ENST00000552480	RPL22	P35268	128 aa	Known RBP	13.11	□□□□□ -0.31
CACNB3-223	ENST00000552480	BMPR1A	P36894	532 aa		13.11	□□□□□ -0.31
CACNB3-223	ENST00000552480	GPS2	Q13227	327 aa		13.11	□□□□□ -0.31
CACNB3-223	ENST00000552480	PLD1	Q13393	1074 aa		13.11	□□□□□ -0.31
CACNB3-223	ENST00000552480	SLMAP	Q14BN4	828 aa		13.11	□□□□□ -0.31
CACNB3-223	ENST00000552480	VEPH1	Q14D04	833 aa		13.11	□□□□□ -0.31
CACNB3-223	ENST00000552480	C10orf120	Q5SQS8	335 aa		13.11	□□□□□ -0.31
CACNB3-223	ENST00000552480	PCGF5	Q86SE9	256 aa		13.11	□□□□□ -0.31
CACNB3-223	ENST00000552480	TADA2B	Q86TJ2	420 aa		13.11	□□□□□ -0.31
CACNB3-223	ENST00000552480	MYRFL	Q96LU7	910 aa		13.11	□□□□□ -0.31
CACNB3-223	ENST00000552480	LBHD1	Q9BQE6	289 aa	Predicted RBP	13.11	□□□□□ -0.31
CACNB3-223	ENST00000552480	USP29	Q9HBJ7	922 aa		13.11	□□□□□ -0.31
CACNB3-223	ENST00000552480	MARCH2	Q9P0N8	246 aa		13.11	□□□□□ -0.31
CACNB3-223	ENST00000552480	TPX2	Q9ULW0	747 aa	Known RBP	13.11	□□□□□ -0.31
CACNB3-223	ENST00000552480	SNX10	Q9Y5X0	201 aa		13.11	□□□□□ -0.31
CACNB3-223	ENST00000552480	ZNF638	Q14966	1978 aa	Known RBP	13.11	□□□□□ -0.31
CACNB3-223	ENST00000552480	PLXNA4	Q9HCM2	1894 aa		13.1	□□□□□ -0.31
CACNB3-223	ENST00000552480	LCHN	A4D1U4	455 aa		13.1	□□□□□ -0.31
CACNB3-223	ENST00000552480	GOLGA6B	A6NDN3	693 aa		13.1	□□□□□ -0.31
CACNB3-223	ENST00000552480	SMAP	O00193	183 aa		13.1	□□□□□ -0.31
CACNB3-223	ENST00000552480	PRRG1	O14668	218 aa		13.1	□□□□□ -0.31
CACNB3-223	ENST00000552480	KCNN4	O15554	427 aa		13.1	□□□□□ -0.31
CACNB3-223	ENST00000552480	TLR5	O60602	858 aa		13.1	□□□□□ -0.31
CACNB3-223	ENST00000552480	LRIG2	O94898	1065 aa		13.1	□□□□□ -0.31
CACNB3-223	ENST00000552480	IGLV3-27	P01718	113 aa		13.1	□□□□□ -0.31
CACNB3-223	ENST00000552480	RBL1	P28749	1068 aa		13.1	□□□□□ -0.31
CACNB3-223	ENST00000552480	CA8	P35219	290 aa		13.1	□□□□□ -0.31
CACNB3-223	ENST00000552480	CTNNB1	P35222	781 aa		13.1	□□□□□ -0.31
CACNB3-223	ENST00000552480	SERPINB6	P35237	376 aa		13.1	□□□□□ -0.31
CACNB3-223	ENST00000552480	HSD17B3	P37058	310 aa		13.1	□□□□□ -0.31
CACNB3-223	ENST00000552480	KPNA1	P52294	538 aa	Predicted RBP	13.1	□□□□□ -0.31
CACNB3-223	ENST00000552480	EPHB3	P54753	998 aa		13.1	□□□□□ -0.31
CACNB3-223	ENST00000552480	TWF1	Q12792	350 aa		13.1	□□□□□ -0.31
CACNB3-223	ENST00000552480	MTA1	Q13330	715 aa		13.1	□□□□□ -0.31
CACNB3-223	ENST00000552480	MORF4L2	Q15014	288 aa		13.1	□□□□□ -0.31
CACNB3-223	ENST00000552480	PDK1	Q15118	436 aa		13.1	□□□□□ -0.31
CACNB3-223	ENST00000552480	CFAP58	Q5T655	872 aa		13.1	□□□□□ -0.31
CACNB3-223	ENST00000552480	ACBD5	Q5T8D3	534 aa	Predicted RBP	13.1	□□□□□ -0.31
CACNB3-223	ENST00000552480	RNASEH2B	Q5TBB1	312 aa	Known RBP	13.1	□□□□□ -0.31
CACNB3-223	ENST00000552480	MANEAL	Q5VSG8	457 aa		13.1	□□□□□ -0.31
CACNB3-223	ENST00000552480	C4orf22	Q6V702	233 aa		13.1	□□□□□ -0.31
CACNB3-223	ENST00000552480	CEP128	Q6ZU80	1094 aa		13.1	□□□□□ -0.31
CACNB3-223	ENST00000552480	KRT222	Q8N1A0	295 aa		13.1	□□□□□ -0.31
CACNB3-223	ENST00000552480	ATP6V0D2	Q8N8Y2	350 aa		13.1	□□□□□ -0.31
CACNB3-223	ENST00000552480	TFB1M	Q8WVM0	346 aa	Known RBP	13.1	□□□□□ -0.31
CACNB3-223	ENST00000552480	TBC1D31	Q96DN5	1066 aa		13.1	□□□□□ -0.31
CACNB3-223	ENST00000552480	C1orf74	Q96LT6	269 aa		13.1	□□□□□ -0.31
CACNB3-223	ENST00000552480	ADAM7	Q9H2U9	754 aa		13.1	□□□□□ -0.31
CACNB3-223	ENST00000552480	CCSER2	Q9H7U1	834 aa		13.1	□□□□□ -0.31
CACNB3-223	ENST00000552480	PAK5	Q9P286	719 aa		13.1	□□□□□ -0.31
CACNB3-223	ENST00000552480	SLC12A6	Q9UHW9	1150 aa		13.1	□□□□□ -0.31
CACNB3-223	ENST00000552480	SHOC2	Q9UQ13	582 aa		13.1	□□□□□ -0.31
CACNB3-223	ENST00000552480	NEU3	Q9UQ49	428 aa		13.1	□□□□□ -0.31
CACNB3-223	ENST00000552480	ATP8A1	Q9Y2Q0	1164 aa		13.1	□□□□□ -0.31
CACNB3-223	ENST00000552480	HBS1L	Q9Y450	684 aa	Known RBP	13.1	□□□□□ -0.31
CACNB3-223	ENST00000552480	INSL5	Q9Y5Q6	135 aa		13.1	□□□□□ -0.31
CACNB3-223	ENST00000552480	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	13.09	□□□□□ -0.31
CACNB3-223	ENST00000552480	SLC12A8	A0AV02	714 aa		13.09	□□□□□ -0.31
CACNB3-223	ENST00000552480	ZNF840P	A6NDX5	716 aa		13.09	□□□□□ -0.31
CACNB3-223	ENST00000552480	PPP1R12A	O14974	1030 aa	Predicted RBP	13.09	□□□□□ -0.31
CACNB3-223	ENST00000552480	NCAM2	O15394	837 aa		13.09	□□□□□ -0.31
CACNB3-223	ENST00000552480	FGF10	O15520	208 aa	Predicted RBP	13.09	□□□□□ -0.31
CACNB3-223	ENST00000552480	MAP3K6	O95382	1288 aa		13.09	□□□□□ -0.31
CACNB3-223	ENST00000552480	CXCL14	O95715	111 aa		13.09	□□□□□ -0.31
CACNB3-223	ENST00000552480	TBX18	O95935	607 aa		13.09	□□□□□ -0.31
CACNB3-223	ENST00000552480	MOCS2	O96007	188 aa	Predicted RBP	13.09	□□□□□ -0.31
CACNB3-223	ENST00000552480	CNP	P09543	421 aa	Known RBP	13.09	□□□□□ -0.31
CACNB3-223	ENST00000552480	EPHB2	P29323	1055 aa		13.09	□□□□□ -0.31
CACNB3-223	ENST00000552480	ACTN2	P35609	894 aa		13.09	□□□□□ -0.31
CACNB3-223	ENST00000552480	CHKA	P35790	457 aa		13.09	□□□□□ -0.31
CACNB3-223	ENST00000552480	PPP3CC	P48454	512 aa		13.09	□□□□□ -0.31
CACNB3-223	ENST00000552480	TUB	P50607	506 aa		13.09	□□□□□ -0.31
CACNB3-223	ENST00000552480	PMS2	P54278	862 aa		13.09	□□□□□ -0.31
CACNB3-223	ENST00000552480	RING1	Q06587	406 aa		13.09	□□□□□ -0.31
CACNB3-223	ENST00000552480	PRKD1	Q15139	912 aa	Predicted RBP	13.09	□□□□□ -0.31
CACNB3-223	ENST00000552480	UAP1	Q16222	522 aa	Predicted RBP	13.09	□□□□□ -0.31
CACNB3-223	ENST00000552480	TAF12	Q16514	161 aa		13.09	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms