RNA–Protein interactions for RNA: ENST00000551008.5

NPAS3-209, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-209ENST00000551008 MKRN2Q9H000 416 aaKnown RBP13.55□□□□□ -0.24
NPAS3-209ENST00000551008 NUCKS1Q9H1E3 243 aaKnown RBP13.55□□□□□ -0.24
NPAS3-209ENST00000551008 BCCIPQ9P287 314 aaKnown RBP eCLIP13.55□□□□□ -0.24
NPAS3-209ENST00000551008 INTS6Q9UL03 887 aaKnown RBP13.55□□□□□ -0.24
NPAS3-209ENST00000551008 TLR6Q9Y2C9 796 aa13.55□□□□□ -0.24
NPAS3-209ENST00000551008 PCNX2A6NKB5 2137 aa13.54□□□□□ -0.24
NPAS3-209ENST00000551008 KCNJ18B7U540 433 aa13.54□□□□□ -0.24
NPAS3-209ENST00000551008 MED7O43513 233 aa13.54□□□□□ -0.24
NPAS3-209ENST00000551008 ERBB2P04626 1255 aa13.54□□□□□ -0.24
NPAS3-209ENST00000551008 CYBBP04839 570 aa13.54□□□□□ -0.24
NPAS3-209ENST00000551008 C7P10643 843 aa13.54□□□□□ -0.24
NPAS3-209ENST00000551008 CD70P32970 193 aa13.54□□□□□ -0.24
NPAS3-209ENST00000551008 USP8P40818 1118 aa13.54□□□□□ -0.24
NPAS3-209ENST00000551008 DHPSP49366 369 aaPredicted RBP13.54□□□□□ -0.24
NPAS3-209ENST00000551008 COPAP53621 1224 aa13.54□□□□□ -0.24
NPAS3-209ENST00000551008 RPS24P62847 133 aaKnown RBP13.54□□□□□ -0.24
NPAS3-209ENST00000551008 FOXK2Q01167 660 aa13.54□□□□□ -0.24
NPAS3-209ENST00000551008 KCNJ12Q14500 433 aa13.54□□□□□ -0.24
NPAS3-209ENST00000551008 EIF4HQ15056 248 aaKnown RBP13.54□□□□□ -0.24
NPAS3-209ENST00000551008 PTPRNQ16849 979 aa13.54□□□□□ -0.24
NPAS3-209ENST00000551008 AASDHQ4L235 1098 aaPredicted RBP13.54□□□□□ -0.24
NPAS3-209ENST00000551008 TCP11X2Q5H9J9 407 aa13.54□□□□□ -0.24
NPAS3-209ENST00000551008 STPG1Q5TH74 334 aa13.54□□□□□ -0.24
NPAS3-209ENST00000551008 PEAR1Q5VY43 1037 aaPredicted RBP13.54□□□□□ -0.24
NPAS3-209ENST00000551008 NUGGCQ68CJ6 796 aa13.54□□□□□ -0.24
NPAS3-209ENST00000551008 OLFML1Q6UWY5 402 aa13.54□□□□□ -0.24
NPAS3-209ENST00000551008 NUDT18Q6ZVK8 323 aa13.54□□□□□ -0.24
NPAS3-209ENST00000551008 C11orf74Q86VG3 221 aa13.54□□□□□ -0.24
NPAS3-209ENST00000551008 C1orf131Q8NDD1 294 aaKnown RBP13.54□□□□□ -0.24
NPAS3-209ENST00000551008 CYB5D2Q8WUJ1 264 aa13.54□□□□□ -0.24
NPAS3-209ENST00000551008 DDX1Q92499 740 aaKnown RBP13.54□□□□□ -0.24
NPAS3-209ENST00000551008 AZIN2Q96A70 460 aa13.54□□□□□ -0.24
NPAS3-209ENST00000551008 TMA16Q96EY4 203 aaKnown RBP13.54□□□□□ -0.24
NPAS3-209ENST00000551008 MYO19Q96H55 970 aa13.54□□□□□ -0.24
NPAS3-209ENST00000551008 FAM81BQ96LP2 452 aa13.54□□□□□ -0.24
NPAS3-209ENST00000551008 SLC2A13Q96QE2 648 aa13.54□□□□□ -0.24
NPAS3-209ENST00000551008 GANQ9H2C0 597 aa13.54□□□□□ -0.24
NPAS3-209ENST00000551008 PLCB1Q9NQ66 1216 aa13.54□□□□□ -0.24
NPAS3-209ENST00000551008 ABCB8Q9NUT2 735 aa13.54□□□□□ -0.24
NPAS3-209ENST00000551008 NFE2L3Q9Y4A8 694 aa13.54□□□□□ -0.24
NPAS3-209ENST00000551008 KNL1Q8NG31 2342 aa13.54□□□□□ -0.24
NPAS3-209ENST00000551008 ATXN2Q99700 1313 aaKnown RBP13.54□□□□□ -0.24
NPAS3-209ENST00000551008 EPHB6O15197 1021 aa13.53□□□□□ -0.24
NPAS3-209ENST00000551008 SART1O43290 800 aaKnown RBP13.53□□□□□ -0.24
NPAS3-209ENST00000551008 TBL1XO60907 577 aa13.53□□□□□ -0.24
NPAS3-209ENST00000551008 TRUB2O95900 331 aaKnown RBP13.53□□□□□ -0.24
NPAS3-209ENST00000551008 HLA-EP13747 358 aa13.53□□□□□ -0.24
NPAS3-209ENST00000551008 PRKCSHP14314 528 aaPredicted RBP13.53□□□□□ -0.24
NPAS3-209ENST00000551008 SDHBP21912 280 aa13.53□□□□□ -0.24
NPAS3-209ENST00000551008 ITPKAP23677 461 aa13.53□□□□□ -0.24
NPAS3-209ENST00000551008 KLK7P49862 253 aa13.53□□□□□ -0.24
NPAS3-209ENST00000551008 ZNF445P59923 1031 aa13.53□□□□□ -0.24
NPAS3-209ENST00000551008 DRAP1Q14919 205 aaPredicted RBP13.53□□□□□ -0.24
NPAS3-209ENST00000551008 TPD52L1Q16890 204 aaPredicted RBP13.53□□□□□ -0.24
NPAS3-209ENST00000551008 ZC3H12AQ5D1E8 599 aaKnown RBP13.53□□□□□ -0.24
NPAS3-209ENST00000551008 KLHDC7AQ5VTJ3 777 aa13.53□□□□□ -0.24
NPAS3-209ENST00000551008 SMYD5Q6GMV2 418 aa13.53□□□□□ -0.24
NPAS3-209ENST00000551008 FAM183BPQ6ZVS7 135 aa13.53□□□□□ -0.24
NPAS3-209ENST00000551008 CYP2U1Q7Z449 544 aa13.53□□□□□ -0.24
NPAS3-209ENST00000551008 FAM114A1Q8IWE2 563 aa13.53□□□□□ -0.24
NPAS3-209ENST00000551008 PGBD3Q8N328 593 aa13.53□□□□□ -0.24
NPAS3-209ENST00000551008 DEFB119Q8N690 84 aa13.53□□□□□ -0.24
NPAS3-209ENST00000551008 ZNF366Q8N895 744 aa13.53□□□□□ -0.24
NPAS3-209ENST00000551008 ENOX1Q8TC92 643 aaKnown RBP13.53□□□□□ -0.24
NPAS3-209ENST00000551008 SPACA7Q96KW9 195 aa13.53□□□□□ -0.24
NPAS3-209ENST00000551008 SERPINB11Q96P15 392 aa13.53□□□□□ -0.24
NPAS3-209ENST00000551008 PRMT1Q99873 361 aaKnown RBP13.53□□□□□ -0.24
NPAS3-209ENST00000551008 LHX5Q9H2C1 402 aa13.53□□□□□ -0.24
NPAS3-209ENST00000551008 HSD3B7Q9H2F3 369 aa13.53□□□□□ -0.24
NPAS3-209ENST00000551008 TMEM245Q9H330 911 aa13.53□□□□□ -0.24
NPAS3-209ENST00000551008 POPDC2Q9HBU9 364 aa13.53□□□□□ -0.24
NPAS3-209ENST00000551008 TAB2Q9NYJ8 693 aa13.53□□□□□ -0.24
NPAS3-209ENST00000551008 USP36Q9P275 1121 aaKnown RBP13.53□□□□□ -0.24
NPAS3-209ENST00000551008 GGA2Q9UJY4 613 aa13.53□□□□□ -0.24
NPAS3-209ENST00000551008 CYP8B1Q9UNU6 501 aa13.53□□□□□ -0.24
NPAS3-209ENST00000551008 CHD8Q9HCK8 2581 aa13.53□□□□□ -0.24
NPAS3-209ENST00000551008 ACACBO00763 2458 aa13.52□□□□□ -0.24
NPAS3-209ENST00000551008 I6L893 689 aaPredicted RBP13.52□□□□□ -0.25
NPAS3-209ENST00000551008 CDX4O14627 284 aaPredicted RBP13.52□□□□□ -0.25
NPAS3-209ENST00000551008 FOXD2O60548 495 aaPredicted RBP13.52□□□□□ -0.25
NPAS3-209ENST00000551008 PABPC1P11940 636 aaKnown RBP13.52□□□□□ -0.25
NPAS3-209ENST00000551008 TFE3P19532 575 aaPredicted RBP13.52□□□□□ -0.25
NPAS3-209ENST00000551008 CDH5P33151 784 aaPredicted RBP13.52□□□□□ -0.25
NPAS3-209ENST00000551008 YWHAZP63104 245 aaKnown RBP13.52□□□□□ -0.25
NPAS3-209ENST00000551008 IRX4P78413 519 aa13.52□□□□□ -0.25
NPAS3-209ENST00000551008 LMAN2Q12907 356 aa13.52□□□□□ -0.25
NPAS3-209ENST00000551008 CAMK2GQ13555 558 aaPredicted RBP13.52□□□□□ -0.25
NPAS3-209ENST00000551008 KRT31Q15323 416 aa13.52□□□□□ -0.25
NPAS3-209ENST00000551008 DCAF6Q58WW2 860 aa13.52□□□□□ -0.25
NPAS3-209ENST00000551008 FSCBQ5H9T9 825 aa13.52□□□□□ -0.25
NPAS3-209ENST00000551008 MS4A13Q5J8X5 152 aa13.52□□□□□ -0.25
NPAS3-209ENST00000551008 CT47A1Q5JQC4 288 aaPredicted RBP13.52□□□□□ -0.25
NPAS3-209ENST00000551008 MPP7Q5T2T1 576 aa13.52□□□□□ -0.25
NPAS3-209ENST00000551008 ARTNQ5T4W7 220 aa13.52□□□□□ -0.25
NPAS3-209ENST00000551008 MMS22LQ6ZRQ5 1243 aa13.52□□□□□ -0.25
NPAS3-209ENST00000551008 CHST9Q7L1S5 443 aa13.52□□□□□ -0.25
NPAS3-209ENST00000551008 LPCAT2Q7L5N7 544 aa13.52□□□□□ -0.25
NPAS3-209ENST00000551008 UNC45BQ8IWX7 931 aa13.52□□□□□ -0.25
NPAS3-209ENST00000551008 DEFB106AQ8N104 65 aa13.52□□□□□ -0.25
NPAS3-209ENST00000551008 CFAP52Q8N1V2 620 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms