RNA–Protein interactions for RNA: ENST00000550974.1

GPN3-208, Transcript of GPN-loop GTPase 3, humanhuman

TSL 5

Gene GPN3, Length 564 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-208ENST00000550974 TIPINQ9BVW5 301 aa11.85□□□□□ -0.51
GPN3-208ENST00000550974 ZNF518BQ9C0D4 1074 aa11.85□□□□□ -0.51
GPN3-208ENST00000550974 CAAP1Q9H8G2 361 aa11.85□□□□□ -0.51
GPN3-208ENST00000550974 ZFHX3Q15911 3703 aa11.85□□□□□ -0.51
GPN3-208ENST00000550974 LRBAP50851 2863 aa11.85□□□□□ -0.51
GPN3-208ENST00000550974 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.84□□□□□ -0.51
GPN3-208ENST00000550974 CLDN5O00501 218 aa11.84□□□□□ -0.51
GPN3-208ENST00000550974 PLD2O14939 933 aa11.84□□□□□ -0.51
GPN3-208ENST00000550974 RNASEH2AO75792 299 aaKnown RBP11.84□□□□□ -0.51
GPN3-208ENST00000550974 CLDN1O95832 211 aa11.84□□□□□ -0.51
GPN3-208ENST00000550974 PIGRP01833 764 aa11.84□□□□□ -0.51
GPN3-208ENST00000550974 RARGP13631 454 aa11.84□□□□□ -0.51
GPN3-208ENST00000550974 GUCY2CP25092 1073 aa11.84□□□□□ -0.51
GPN3-208ENST00000550974 TRAPPC10P48553 1259 aa11.84□□□□□ -0.51
GPN3-208ENST00000550974 PGFP49763 221 aa11.84□□□□□ -0.51
GPN3-208ENST00000550974 NCKAP1LP55160 1127 aa11.84□□□□□ -0.51
GPN3-208ENST00000550974 ZNF177Q13360 481 aaPredicted RBP11.84□□□□□ -0.51
GPN3-208ENST00000550974 STAT4Q14765 748 aa11.84□□□□□ -0.51
GPN3-208ENST00000550974 EFL1Q7Z2Z2 1120 aaKnown RBP11.84□□□□□ -0.51
GPN3-208ENST00000550974 NT5DC4Q86YG4 428 aa11.84□□□□□ -0.51
GPN3-208ENST00000550974 FBXO39Q8N4B4 442 aa11.84□□□□□ -0.51
GPN3-208ENST00000550974 LRRC52Q8N7C0 313 aa11.84□□□□□ -0.51
GPN3-208ENST00000550974 FAM84AQ96KN4 292 aa11.84□□□□□ -0.51
GPN3-208ENST00000550974 KCNK16Q96T55 309 aa11.84□□□□□ -0.51
GPN3-208ENST00000550974 OMDQ99983 421 aa11.84□□□□□ -0.51
GPN3-208ENST00000550974 ELOVL4Q9GZR5 314 aa11.84□□□□□ -0.51
GPN3-208ENST00000550974 MTG2Q9H4K7 406 aa11.84□□□□□ -0.51
GPN3-208ENST00000550974 USP29Q9HBJ7 922 aa11.84□□□□□ -0.51
GPN3-208ENST00000550974 CUEDC1Q9NWM3 386 aaPredicted RBP11.84□□□□□ -0.51
GPN3-208ENST00000550974 PCDHB11Q9Y5F2 797 aa11.84□□□□□ -0.51
GPN3-208ENST00000550974 NBASA2RRP1 2371 aa11.84□□□□□ -0.51
GPN3-208ENST00000550974 POLQO75417 2590 aa11.83□□□□□ -0.52
GPN3-208ENST00000550974 TISP43B9A030 160 aa11.83□□□□□ -0.52
GPN3-208ENST00000550974 ANKRD63C9JTQ0 380 aa11.83□□□□□ -0.52
GPN3-208ENST00000550974 CASC3O15234 703 aaKnown RBP11.83□□□□□ -0.52
GPN3-208ENST00000550974 MID1O15344 667 aa11.83□□□□□ -0.52
GPN3-208ENST00000550974 PRKCGP05129 697 aa11.83□□□□□ -0.52
GPN3-208ENST00000550974 ZDHHC11BP0C7U3 371 aa11.83□□□□□ -0.52
GPN3-208ENST00000550974 ATP5C1P36542 298 aaKnown RBP11.83□□□□□ -0.52
GPN3-208ENST00000550974 HARS2P49590 506 aaKnown RBP11.83□□□□□ -0.52
GPN3-208ENST00000550974 AAMPQ13685 434 aa11.83□□□□□ -0.52
GPN3-208ENST00000550974 TOB2Q14106 344 aaPredicted RBP11.83□□□□□ -0.52
GPN3-208ENST00000550974 GUSBP11Q6P575 273 aa11.83□□□□□ -0.52
GPN3-208ENST00000550974 Q6ZNB5 142 aa11.83□□□□□ -0.52
GPN3-208ENST00000550974 DPH6Q7L8W6 267 aa11.83□□□□□ -0.52
GPN3-208ENST00000550974 IQCHQ86VS3 1027 aa11.83□□□□□ -0.52
GPN3-208ENST00000550974 OR14C36Q8NHC7 312 aa11.83□□□□□ -0.52
GPN3-208ENST00000550974 RSPH9Q9H1X1 276 aaPredicted RBP11.83□□□□□ -0.52
GPN3-208ENST00000550974 SYNDIG1Q9H7V2 258 aa11.83□□□□□ -0.52
GPN3-208ENST00000550974 NLGN3Q9NZ94 848 aa11.83□□□□□ -0.52
GPN3-208ENST00000550974 LARSQ9P2J5 1176 aaKnown RBP11.83□□□□□ -0.52
GPN3-208ENST00000550974 DKK3Q9UBP4 350 aa11.83□□□□□ -0.52
GPN3-208ENST00000550974 ACSL6Q9UKU0 697 aa11.83□□□□□ -0.52
GPN3-208ENST00000550974 AGO2Q9UKV8 859 aaKnown RBP11.83□□□□□ -0.52
GPN3-208ENST00000550974 SCML1Q9UN30 329 aa11.83□□□□□ -0.52
GPN3-208ENST00000550974 MYH10P35580 1976 aa11.83□□□□□ -0.52
GPN3-208ENST00000550974 TBC1D3DA0A087WVF3 549 aa11.82□□□□□ -0.52
GPN3-208ENST00000550974 TBC1D3IA0A087WXS9 549 aa11.82□□□□□ -0.52
GPN3-208ENST00000550974 TBC1D3EA0A087X179 549 aa11.82□□□□□ -0.52
GPN3-208ENST00000550974 TBC1D3KA0A087X1G2 549 aa11.82□□□□□ -0.52
GPN3-208ENST00000550974 NPHP3-ACAD11A0A0J9YXS1 232 aa11.82□□□□□ -0.52
GPN3-208ENST00000550974 TBC1D3FA6NER0 549 aaPredicted RBP11.82□□□□□ -0.52
GPN3-208ENST00000550974 TBC1D3LB9A6J9 549 aa11.82□□□□□ -0.52
GPN3-208ENST00000550974 K7ESM1 405 aa11.82□□□□□ -0.52
GPN3-208ENST00000550974 MDM4O15151 490 aa11.82□□□□□ -0.52
GPN3-208ENST00000550974 TCEA3O75764 348 aa11.82□□□□□ -0.52
GPN3-208ENST00000550974 PIAS2O75928 621 aa11.82□□□□□ -0.52
GPN3-208ENST00000550974 CDKL5O76039 1030 aa11.82□□□□□ -0.52
GPN3-208ENST00000550974 NEBLO76041 1014 aa11.82□□□□□ -0.52
GPN3-208ENST00000550974 IL18RAPO95256 599 aa11.82□□□□□ -0.52
GPN3-208ENST00000550974 CYBBP04839 570 aa11.82□□□□□ -0.52
GPN3-208ENST00000550974 TBC1D3HP0C7X1 549 aa11.82□□□□□ -0.52
GPN3-208ENST00000550974 HGFP14210 728 aa11.82□□□□□ -0.52
GPN3-208ENST00000550974 MAT2AP31153 395 aaKnown RBP11.82□□□□□ -0.52
GPN3-208ENST00000550974 UGT1A5P35504 534 aa11.82□□□□□ -0.52
GPN3-208ENST00000550974 CHKAP35790 457 aa11.82□□□□□ -0.52
GPN3-208ENST00000550974 SLC5A3P53794 718 aa11.82□□□□□ -0.52
GPN3-208ENST00000550974 WNT7BP56706 349 aa11.82□□□□□ -0.52
GPN3-208ENST00000550974 PPP2CBP62714 309 aa11.82□□□□□ -0.52
GPN3-208ENST00000550974 PPP2CAP67775 309 aa11.82□□□□□ -0.52
GPN3-208ENST00000550974 EHHADHQ08426 723 aa11.82□□□□□ -0.52
GPN3-208ENST00000550974 OVGP1Q12889 678 aa11.82□□□□□ -0.52
GPN3-208ENST00000550974 ZNF174Q15697 407 aa11.82□□□□□ -0.52
GPN3-208ENST00000550974 POM121L1PQ3SYA9 428 aa11.82□□□□□ -0.52
GPN3-208ENST00000550974 TBC1D3GQ6DHY5 549 aa11.82□□□□□ -0.52
GPN3-208ENST00000550974 TBC1D3CQ6IPX1 549 aa11.82□□□□□ -0.52
GPN3-208ENST00000550974 CRELD2Q6UXH1 353 aaPredicted RBP11.82□□□□□ -0.52
GPN3-208ENST00000550974 RSRC2Q7L4I2 434 aaKnown RBP11.82□□□□□ -0.52
GPN3-208ENST00000550974 RAB11FIP2Q7L804 512 aa11.82□□□□□ -0.52
GPN3-208ENST00000550974 KCNK18Q7Z418 384 aa11.82□□□□□ -0.52
GPN3-208ENST00000550974 PRPF39Q86UA1 669 aaKnown RBP11.82□□□□□ -0.52
GPN3-208ENST00000550974 ZFAND4Q86XD8 727 aa11.82□□□□□ -0.52
GPN3-208ENST00000550974 FAM114A1Q8IWE2 563 aa11.82□□□□□ -0.52
GPN3-208ENST00000550974 TBC1D3Q8IZP1 549 aaPredicted RBP11.82□□□□□ -0.52
GPN3-208ENST00000550974 TPCN2Q8NHX9 752 aa11.82□□□□□ -0.52
GPN3-208ENST00000550974 KLHDC7BQ96G42 594 aa11.82□□□□□ -0.52
GPN3-208ENST00000550974 ZNF274Q96GC6 653 aaPredicted RBP11.82□□□□□ -0.52
GPN3-208ENST00000550974 SLC12A9Q9BXP2 914 aa11.82□□□□□ -0.52
GPN3-208ENST00000550974 EPB41L5Q9HCM4 733 aa11.82□□□□□ -0.52
GPN3-208ENST00000550974 NUDT5Q9UKK9 219 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms