RNA–Protein interactions for RNA: ENST00000550483.5

CACNB3-217, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 730 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-217ENST00000550483 FAM117BQ6P1L5 589 aa13□□□□□ -0.33
CACNB3-217ENST00000550483 LRIG3Q6UXM1 1119 aa13□□□□□ -0.33
CACNB3-217ENST00000550483 RSPO2Q6UXX9 243 aaPredicted RBP13□□□□□ -0.33
CACNB3-217ENST00000550483 PPP1R21Q6ZMI0 780 aa13□□□□□ -0.33
CACNB3-217ENST00000550483 TMC3Q7Z5M5 1100 aa13□□□□□ -0.33
CACNB3-217ENST00000550483 ITIH5Q86UX2 942 aa13□□□□□ -0.33
CACNB3-217ENST00000550483 RELL1Q8IUW5 271 aa13□□□□□ -0.33
CACNB3-217ENST00000550483 HERC6Q8IVU3 1022 aa13□□□□□ -0.33
CACNB3-217ENST00000550483 GSPT2Q8IYD1 628 aaKnown RBP13□□□□□ -0.33
CACNB3-217ENST00000550483 VPS52Q8N1B4 723 aa13□□□□□ -0.33
CACNB3-217ENST00000550483 ATP6V0D2Q8N8Y2 350 aa13□□□□□ -0.33
CACNB3-217ENST00000550483 FBXO25Q8TCJ0 367 aa13□□□□□ -0.33
CACNB3-217ENST00000550483 B3GALT6Q96L58 329 aa13□□□□□ -0.33
CACNB3-217ENST00000550483 C1orf74Q96LT6 269 aa13□□□□□ -0.33
CACNB3-217ENST00000550483 MYRFLQ96LU7 910 aa13□□□□□ -0.33
CACNB3-217ENST00000550483 VN1R3Q9BXE9 311 aa13□□□□□ -0.33
CACNB3-217ENST00000550483 TKTL2Q9H0I9 626 aa13□□□□□ -0.33
CACNB3-217ENST00000550483 RAB6CQ9H0N0 254 aa13□□□□□ -0.33
CACNB3-217ENST00000550483 ZBP1Q9H171 429 aa13□□□□□ -0.33
CACNB3-217ENST00000550483 CATSPERBQ9H7T0 1116 aa13□□□□□ -0.33
CACNB3-217ENST00000550483 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13□□□□□ -0.33
CACNB3-217ENST00000550483 FAM53CQ9NYF3 392 aa13□□□□□ -0.33
CACNB3-217ENST00000550483 COX16Q9P0S2 106 aa13□□□□□ -0.33
CACNB3-217ENST00000550483 GMIPQ9P107 970 aa13□□□□□ -0.33
CACNB3-217ENST00000550483 CALCOCO1Q9P1Z2 691 aa13□□□□□ -0.33
CACNB3-217ENST00000550483 ANAPC5Q9UJX4 755 aa13□□□□□ -0.33
CACNB3-217ENST00000550483 TPX2Q9ULW0 747 aaKnown RBP13□□□□□ -0.33
CACNB3-217ENST00000550483 HPCAL4Q9UM19 191 aa13□□□□□ -0.33
CACNB3-217ENST00000550483 HBS1LQ9Y450 684 aaKnown RBP13□□□□□ -0.33
CACNB3-217ENST00000550483 CHD9Q3L8U1 2897 aa12.99□□□□□ -0.33
CACNB3-217ENST00000550483 TNFRSF10AO00220 468 aa12.99□□□□□ -0.33
CACNB3-217ENST00000550483 FGF18O76093 207 aa12.99□□□□□ -0.33
CACNB3-217ENST00000550483 VNN2O95498 520 aa12.99□□□□□ -0.33
CACNB3-217ENST00000550483 RARGP13631 454 aa12.99□□□□□ -0.33
CACNB3-217ENST00000550483 PECAM1P16284 738 aaPredicted RBP12.99□□□□□ -0.33
CACNB3-217ENST00000550483 GOT1P17174 413 aa12.99□□□□□ -0.33
CACNB3-217ENST00000550483 IVDP26440 423 aa12.99□□□□□ -0.33
CACNB3-217ENST00000550483 HOXC13P31276 330 aa12.99□□□□□ -0.33
CACNB3-217ENST00000550483 EPHB3P54753 998 aa12.99□□□□□ -0.33
CACNB3-217ENST00000550483 TBX4P57082 545 aa12.99□□□□□ -0.33
CACNB3-217ENST00000550483 PITX1P78337 314 aaPredicted RBP12.99□□□□□ -0.33
CACNB3-217ENST00000550483 COG7P83436 770 aa12.99□□□□□ -0.33
CACNB3-217ENST00000550483 IFRD2Q12894 506 aaPredicted RBP12.99□□□□□ -0.33
CACNB3-217ENST00000550483 TAF10Q12962 218 aa12.99□□□□□ -0.33
CACNB3-217ENST00000550483 TRIP4Q15650 581 aaPredicted RBP12.99□□□□□ -0.33
CACNB3-217ENST00000550483 TAF12Q16514 161 aa12.99□□□□□ -0.33
CACNB3-217ENST00000550483 IZUMO3Q5VZ72 239 aa12.99□□□□□ -0.33
CACNB3-217ENST00000550483 NCBP2-AS2Q69YL0 99 aa12.99□□□□□ -0.33
CACNB3-217ENST00000550483 RHBDF2Q6PJF5 856 aa12.99□□□□□ -0.33
CACNB3-217ENST00000550483 ZDHHC24Q6UX98 284 aa12.99□□□□□ -0.33
CACNB3-217ENST00000550483 CCDC149Q6ZUS6 474 aa12.99□□□□□ -0.33
CACNB3-217ENST00000550483 TRMT10CQ7L0Y3 403 aaKnown RBP12.99□□□□□ -0.33
CACNB3-217ENST00000550483 C16orf59Q7L2K0 433 aa12.99□□□□□ -0.33
CACNB3-217ENST00000550483 DDX42Q86XP3 938 aaKnown RBP eCLIP12.99□□□□□ -0.33
CACNB3-217ENST00000550483 LRRC49Q8IUZ0 686 aa12.99□□□□□ -0.33
CACNB3-217ENST00000550483 TFB1MQ8WVM0 346 aaKnown RBP12.99□□□□□ -0.33
CACNB3-217ENST00000550483 SAMD11Q96NU1 681 aa12.99□□□□□ -0.33
CACNB3-217ENST00000550483 OLFM3Q96PB7 478 aa12.99□□□□□ -0.33
CACNB3-217ENST00000550483 QKIQ96PU8 341 aaKnown RBP eCLIP12.99□□□□□ -0.33
CACNB3-217ENST00000550483 TMEM121Q9BTD3 319 aa12.99□□□□□ -0.33
CACNB3-217ENST00000550483 EMILIN2Q9BXX0 1053 aa12.99□□□□□ -0.33
CACNB3-217ENST00000550483 OR12D3Q9UGF7 316 aa12.99□□□□□ -0.33
CACNB3-217ENST00000550483 SLC27A5Q9Y2P5 690 aa12.99□□□□□ -0.33
CACNB3-217ENST00000550483 IRAK3Q9Y616 596 aa12.99□□□□□ -0.33
CACNB3-217ENST00000550483 KCNU1A8MYU2 1149 aa12.98□□□□□ -0.33
CACNB3-217ENST00000550483 DCLK1O15075 740 aa12.98□□□□□ -0.33
CACNB3-217ENST00000550483 EIF3HO15372 352 aaKnown RBP eCLIP12.98□□□□□ -0.33
CACNB3-217ENST00000550483 RRP9O43818 475 aaKnown RBP12.98□□□□□ -0.33
CACNB3-217ENST00000550483 CREB3O43889 395 aa12.98□□□□□ -0.33
CACNB3-217ENST00000550483 SASH3O75995 380 aa12.98□□□□□ -0.33
CACNB3-217ENST00000550483 IFNB1P01574 187 aa12.98□□□□□ -0.33
CACNB3-217ENST00000550483 RB1P06400 928 aa12.98□□□□□ -0.33
CACNB3-217ENST00000550483 ADH1AP07327 375 aa12.98□□□□□ -0.33
CACNB3-217ENST00000550483 ATP2A2P16615 1042 aaKnown RBP12.98□□□□□ -0.33
CACNB3-217ENST00000550483 ATF6P18850 670 aa12.98□□□□□ -0.33
CACNB3-217ENST00000550483 GPR15P49685 360 aa12.98□□□□□ -0.33
CACNB3-217ENST00000550483 RABGGTBP53611 331 aa12.98□□□□□ -0.33
CACNB3-217ENST00000550483 ITGA8P53708 1063 aa12.98□□□□□ -0.33
CACNB3-217ENST00000550483 DHX9Q08211 1270 aaKnown RBP12.98□□□□□ -0.33
CACNB3-217ENST00000550483 GPS1Q13098 491 aa12.98□□□□□ -0.33
CACNB3-217ENST00000550483 PABPC1LQ4VXU2 614 aaKnown RBP12.98□□□□□ -0.33
CACNB3-217ENST00000550483 HEATR6Q6AI08 1181 aaKnown RBP12.98□□□□□ -0.33
CACNB3-217ENST00000550483 HIBCHQ6NVY1 386 aaPredicted RBP12.98□□□□□ -0.33
CACNB3-217ENST00000550483 C1orf228Q6PIY5 440 aa12.98□□□□□ -0.33
CACNB3-217ENST00000550483 UNC45BQ8IWX7 931 aa12.98□□□□□ -0.33
CACNB3-217ENST00000550483 PPIL6Q8IXY8 311 aa12.98□□□□□ -0.33
CACNB3-217ENST00000550483 ZCCHC9Q8N567 271 aaKnown RBP12.98□□□□□ -0.33
CACNB3-217ENST00000550483 ADAM32Q8TC27 787 aa12.98□□□□□ -0.33
CACNB3-217ENST00000550483 CASP10Q92851 521 aa12.98□□□□□ -0.33
CACNB3-217ENST00000550483 TBC1D31Q96DN5 1066 aa12.98□□□□□ -0.33
CACNB3-217ENST00000550483 SLC39A13Q96H72 371 aa12.98□□□□□ -0.33
CACNB3-217ENST00000550483 BTN2A3PQ96KV6 586 aa12.98□□□□□ -0.33
CACNB3-217ENST00000550483 KLC2Q9H0B6 622 aa12.98□□□□□ -0.33
CACNB3-217ENST00000550483 PLEKHA4Q9H4M7 779 aa12.98□□□□□ -0.33
CACNB3-217ENST00000550483 NMUR1Q9HB89 426 aa12.98□□□□□ -0.33
CACNB3-217ENST00000550483 CYP4F11Q9HBI6 524 aa12.98□□□□□ -0.33
CACNB3-217ENST00000550483 TRPM5Q9NZQ8 1165 aa12.98□□□□□ -0.33
CACNB3-217ENST00000550483 PPARGC1AQ9UBK2 798 aaKnown RBP12.98□□□□□ -0.33
CACNB3-217ENST00000550483 YIPF1Q9Y548 306 aa12.98□□□□□ -0.33
CACNB3-217ENST00000550483 HEY1Q9Y5J3 304 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms