RNA–Protein interactions for RNA: ENST00000550457.1

CCNT1-203, Transcript of cyclin T1, humanhuman

TSL 3

Gene CCNT1, Length 351 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-203ENST00000550457 MROH7-TTC4A0A0A0MT08 1334 aa3.54□□□□□ -1.84
CCNT1-203ENST00000550457 ZNF804BA4D1E1 1349 aa3.54□□□□□ -1.84
CCNT1-203ENST00000550457 ADGRA2Q96PE1 1338 aa3.54□□□□□ -1.84
CCNT1-203ENST00000550457 MON2Q7Z3U7 1717 aa3.54□□□□□ -1.84
CCNT1-203ENST00000550457 A0A087WWV3 80 aa3.54□□□□□ -1.84
CCNT1-203ENST00000550457 ANKRD65E5RJM6 399 aa3.54□□□□□ -1.84
CCNT1-203ENST00000550457 GCOM1H8Y6P7 765 aaPredicted RBP3.54□□□□□ -1.84
CCNT1-203ENST00000550457 PDLIM1O00151 329 aa3.54□□□□□ -1.84
CCNT1-203ENST00000550457 CES2O00748 559 aa3.54□□□□□ -1.84
CCNT1-203ENST00000550457 IFIT3O14879 490 aaKnown RBP3.54□□□□□ -1.84
CCNT1-203ENST00000550457 GRM6O15303 877 aa3.54□□□□□ -1.84
CCNT1-203ENST00000550457 ASAP2O43150 1006 aa3.54□□□□□ -1.84
CCNT1-203ENST00000550457 TRAPPC3O43617 180 aa3.54□□□□□ -1.84
CCNT1-203ENST00000550457 PRC1O43663 620 aa3.54□□□□□ -1.84
CCNT1-203ENST00000550457 FLOT1O75955 427 aa3.54□□□□□ -1.84
CCNT1-203ENST00000550457 PRKD3O94806 890 aa3.54□□□□□ -1.84
CCNT1-203ENST00000550457 SNUPNO95149 360 aaKnown RBP3.54□□□□□ -1.84
CCNT1-203ENST00000550457 MYZAPP0CAP1 466 aa3.54□□□□□ -1.84
CCNT1-203ENST00000550457 HSPD1P10809 573 aaKnown RBP3.54□□□□□ -1.84
CCNT1-203ENST00000550457 FERP16591 822 aa3.54□□□□□ -1.84
CCNT1-203ENST00000550457 PAX7P23759 505 aa3.54□□□□□ -1.84
CCNT1-203ENST00000550457 HNRNPH3P31942 346 aaKnown RBP3.54□□□□□ -1.84
CCNT1-203ENST00000550457 KRT9P35527 623 aa3.54□□□□□ -1.84
CCNT1-203ENST00000550457 HSPA9P38646 679 aaKnown RBP3.54□□□□□ -1.84
CCNT1-203ENST00000550457 ANXA11P50995 505 aaKnown RBP3.54□□□□□ -1.84
CCNT1-203ENST00000550457 EIF3BP55884 814 aaKnown RBP3.54□□□□□ -1.84
CCNT1-203ENST00000550457 IFT88Q13099 833 aa3.54□□□□□ -1.84
CCNT1-203ENST00000550457 EIF2B5Q13144 721 aaKnown RBP3.54□□□□□ -1.84
CCNT1-203ENST00000550457 CUL1Q13616 776 aa3.54□□□□□ -1.84
CCNT1-203ENST00000550457 KLF9Q13886 244 aaPredicted RBP3.54□□□□□ -1.84
CCNT1-203ENST00000550457 ITIH4Q14624 930 aa3.54□□□□□ -1.84
CCNT1-203ENST00000550457 MTF1Q14872 753 aa3.54□□□□□ -1.84
CCNT1-203ENST00000550457 NAA25Q14CX7 972 aa3.54□□□□□ -1.84
CCNT1-203ENST00000550457 TTF1Q15361 905 aaPredicted RBP3.54□□□□□ -1.84
CCNT1-203ENST00000550457 SLC5A9Q2M3M2 681 aa3.54□□□□□ -1.84
CCNT1-203ENST00000550457 CCDC57Q2TAC2 916 aa3.54□□□□□ -1.84
CCNT1-203ENST00000550457 CFAP221Q4G0U5 840 aa3.54□□□□□ -1.84
CCNT1-203ENST00000550457 ANKRD20A8PQ5CZ79 823 aa3.54□□□□□ -1.84
CCNT1-203ENST00000550457 MTX3Q5HYI7 312 aa3.54□□□□□ -1.84
CCNT1-203ENST00000550457 CCDC122Q5T0U0 273 aa3.54□□□□□ -1.84
CCNT1-203ENST00000550457 SLC9C2Q5TAH2 1124 aa3.54□□□□□ -1.84
CCNT1-203ENST00000550457 CCDC181Q5TID7 509 aa3.54□□□□□ -1.84
CCNT1-203ENST00000550457 AGBL2Q5U5Z8 902 aa3.54□□□□□ -1.84
CCNT1-203ENST00000550457 ZNF626Q68DY1 528 aa3.54□□□□□ -1.84
CCNT1-203ENST00000550457 NCAPH2Q6IBW4 605 aa3.54□□□□□ -1.84
CCNT1-203ENST00000550457 C11orf87Q6NUJ2 197 aa3.54□□□□□ -1.84
CCNT1-203ENST00000550457 CCDC129Q6ZRS4 1044 aa3.54□□□□□ -1.84
CCNT1-203ENST00000550457 STOX1Q6ZVD7 989 aa3.54□□□□□ -1.84
CCNT1-203ENST00000550457 FOXP4Q8IVH2 680 aaPredicted RBP3.54□□□□□ -1.84
CCNT1-203ENST00000550457 FAM114A1Q8IWE2 563 aa3.54□□□□□ -1.84
CCNT1-203ENST00000550457 RHOT1Q8IXI2 618 aa3.54□□□□□ -1.84
CCNT1-203ENST00000550457 CACNA2D3Q8IZS8 1091 aa3.54□□□□□ -1.84
CCNT1-203ENST00000550457 AFAP1L2Q8N4X5 818 aa3.54□□□□□ -1.84
CCNT1-203ENST00000550457 SPATA4Q8NEY3 305 aa3.54□□□□□ -1.84
CCNT1-203ENST00000550457 IL17REQ8NFR9 667 aa3.54□□□□□ -1.84
CCNT1-203ENST00000550457 SEMA6DQ8NFY4 1073 aa3.54□□□□□ -1.84
CCNT1-203ENST00000550457 NLGN4YQ8NFZ3 816 aaPredicted RBP3.54□□□□□ -1.84
CCNT1-203ENST00000550457 RASSF8Q8NHQ8 419 aa3.54□□□□□ -1.84
CCNT1-203ENST00000550457 ZFAND2BQ8WV99 257 aa3.54□□□□□ -1.84
CCNT1-203ENST00000550457 NRG4Q8WWG1 115 aa3.54□□□□□ -1.84
CCNT1-203ENST00000550457 AHCYL2Q96HN2 611 aaKnown RBP3.54□□□□□ -1.84
CCNT1-203ENST00000550457 IFT74Q96LB3 600 aa3.54□□□□□ -1.84
CCNT1-203ENST00000550457 NEUROD6Q96NK8 337 aa3.54□□□□□ -1.84
CCNT1-203ENST00000550457 HAPLN3Q96S86 360 aa3.54□□□□□ -1.84
CCNT1-203ENST00000550457 MMS19Q96T76 1030 aa3.54□□□□□ -1.84
CCNT1-203ENST00000550457 NUP88Q99567 741 aaPredicted RBP3.54□□□□□ -1.84
CCNT1-203ENST00000550457 C7orf25Q9BPX7 421 aa3.54□□□□□ -1.84
CCNT1-203ENST00000550457 EDEM3Q9BZQ6 932 aa3.54□□□□□ -1.84
CCNT1-203ENST00000550457 CCDC8Q9H0W5 538 aaPredicted RBP3.54□□□□□ -1.84
CCNT1-203ENST00000550457 PLEKHA4Q9H4M7 779 aa3.54□□□□□ -1.84
CCNT1-203ENST00000550457 THAP9Q9H5L6 903 aa3.54□□□□□ -1.84
CCNT1-203ENST00000550457 PLCB1Q9NQ66 1216 aa3.54□□□□□ -1.84
CCNT1-203ENST00000550457 GDF3Q9NR23 364 aa3.54□□□□□ -1.84
CCNT1-203ENST00000550457 ZNF277Q9NRM2 450 aaPredicted RBP3.54□□□□□ -1.84
CCNT1-203ENST00000550457 AATFQ9NY61 560 aaKnown RBP eCLIP3.54□□□□□ -1.84
CCNT1-203ENST00000550457 INTUQ9ULD6 942 aa3.54□□□□□ -1.84
CCNT1-203ENST00000550457 SNX12Q9UMY4 172 aa3.54□□□□□ -1.84
CCNT1-203ENST00000550457 HYOU1Q9Y4L1 999 aa3.54□□□□□ -1.84
CCNT1-203ENST00000550457 GPR45Q9Y5Y3 372 aa3.54□□□□□ -1.84
CCNT1-203ENST00000550457 SETD1BQ9UPS6 1966 aaKnown RBP3.54□□□□□ -1.84
CCNT1-203ENST00000550457 CPS1P31327 1500 aa3.54□□□□□ -1.84
CCNT1-203ENST00000550457 LMTK3Q96Q04 1460 aa3.54□□□□□ -1.84
CCNT1-203ENST00000550457 ZNF609O15014 1411 aa3.53□□□□□ -1.84
CCNT1-203ENST00000550457 USP6P35125 1406 aa3.53□□□□□ -1.84
CCNT1-203ENST00000550457 CPDO75976 1380 aa3.53□□□□□ -1.84
CCNT1-203ENST00000550457 NID2Q14112 1375 aa3.53□□□□□ -1.84
CCNT1-203ENST00000550457 HEG1Q9ULI3 1381 aa3.53□□□□□ -1.84
CCNT1-203ENST00000550457 KLF18A0A0U1RQI7 1052 aa3.53□□□□□ -1.84
CCNT1-203ENST00000550457 CCT8L1PA6NM43 557 aa3.53□□□□□ -1.84
CCNT1-203ENST00000550457 LINC01548A6NM66 108 aa3.53□□□□□ -1.84
CCNT1-203ENST00000550457 LGALS16A8MUM7 142 aa3.53□□□□□ -1.84
CCNT1-203ENST00000550457 E7EVH7 732 aa3.53□□□□□ -1.84
CCNT1-203ENST00000550457 MPHOSPH10O00566 681 aaKnown RBP3.53□□□□□ -1.84
CCNT1-203ENST00000550457 POLR2DO15514 142 aaKnown RBP3.53□□□□□ -1.84
CCNT1-203ENST00000550457 PPIP5K2O43314 1243 aa3.53□□□□□ -1.84
CCNT1-203ENST00000550457 BRINP1O60477 761 aa3.53□□□□□ -1.84
CCNT1-203ENST00000550457 RTN3O95197 1032 aaPredicted RBP3.53□□□□□ -1.84
CCNT1-203ENST00000550457 LCA5LO95447 670 aa3.53□□□□□ -1.84
CCNT1-203ENST00000550457 ATP6V1G2O95670 118 aa3.53□□□□□ -1.84
CCNT1-203ENST00000550457 EYA4O95677 639 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms