RNA–Protein interactions for RNA: ENST00000549686.5

LETMD1-220, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 563 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-220ENST00000549686 AADACL2Q6P093 401 aa17.99■□□□□ 0.47
LETMD1-220ENST00000549686 SYCE2Q6PIF2 218 aa17.99■□□□□ 0.47
LETMD1-220ENST00000549686 RFX8Q6ZV50 586 aa17.99■□□□□ 0.47
LETMD1-220ENST00000549686 RFX6Q8HWS3 928 aa17.99■□□□□ 0.47
LETMD1-220ENST00000549686 CMTM8Q8IZV2 173 aa17.99■□□□□ 0.47
LETMD1-220ENST00000549686 KIAA1958Q8N8K9 716 aa17.99■□□□□ 0.47
LETMD1-220ENST00000549686 PABPC5Q96DU9 382 aaKnown RBP17.99■□□□□ 0.47
LETMD1-220ENST00000549686 TCEAL4Q96EI5 215 aa17.99■□□□□ 0.47
LETMD1-220ENST00000549686 ZFRQ96KR1 1074 aaKnown RBP17.99■□□□□ 0.47
LETMD1-220ENST00000549686 CARD6Q9BX69 1037 aa17.99■□□□□ 0.47
LETMD1-220ENST00000549686 RETREG1Q9H6L5 497 aa17.99■□□□□ 0.47
LETMD1-220ENST00000549686 CPQQ9Y646 472 aa17.99■□□□□ 0.47
LETMD1-220ENST00000549686 I6L893 689 aaPredicted RBP17.98■□□□□ 0.47
LETMD1-220ENST00000549686 PDE2AO00408 941 aaPredicted RBP17.98■□□□□ 0.47
LETMD1-220ENST00000549686 FGF10O15520 208 aaPredicted RBP17.98■□□□□ 0.47
LETMD1-220ENST00000549686 LINC01565O15544 149 aa17.98■□□□□ 0.47
LETMD1-220ENST00000549686 DAPK3O43293 454 aa17.98■□□□□ 0.47
LETMD1-220ENST00000549686 CREB3O43889 395 aa17.98■□□□□ 0.47
LETMD1-220ENST00000549686 ACSL4O60488 711 aa17.98■□□□□ 0.47
LETMD1-220ENST00000549686 TCF3P15923 654 aa17.98■□□□□ 0.47
LETMD1-220ENST00000549686 GJA1P17302 382 aa17.98■□□□□ 0.47
LETMD1-220ENST00000549686 TGM2P21980 687 aa17.98■□□□□ 0.47
LETMD1-220ENST00000549686 FSHRP23945 695 aa17.98■□□□□ 0.47
LETMD1-220ENST00000549686 HOXC13P31276 330 aa17.98■□□□□ 0.47
LETMD1-220ENST00000549686 KCNQ1P51787 676 aa17.98■□□□□ 0.47
LETMD1-220ENST00000549686 NTHL1P78549 312 aa17.98■□□□□ 0.47
LETMD1-220ENST00000549686 ADGRE1Q14246 886 aa17.98■□□□□ 0.47
LETMD1-220ENST00000549686 MANEALQ5VSG8 457 aa17.98■□□□□ 0.47
LETMD1-220ENST00000549686 KAZNQ674X7 775 aa17.98■□□□□ 0.47
LETMD1-220ENST00000549686 SLC9A4Q6AI14 798 aa17.98■□□□□ 0.47
LETMD1-220ENST00000549686 PYROXD2Q8N2H3 581 aa17.98■□□□□ 0.47
LETMD1-220ENST00000549686 SPATA4Q8NEY3 305 aa17.98■□□□□ 0.47
LETMD1-220ENST00000549686 TBC1D31Q96DN5 1066 aa17.98■□□□□ 0.47
LETMD1-220ENST00000549686 RIPOR3Q96MK2 946 aa17.98■□□□□ 0.47
LETMD1-220ENST00000549686 RUNDC3BQ96NL0 473 aa17.98■□□□□ 0.47
LETMD1-220ENST00000549686 SLC22A12Q96S37 553 aa17.98■□□□□ 0.47
LETMD1-220ENST00000549686 CYP2S1Q96SQ9 504 aa17.98■□□□□ 0.47
LETMD1-220ENST00000549686 HEMGNQ9BXL5 484 aa17.98■□□□□ 0.47
LETMD1-220ENST00000549686 SLITRK6Q9H5Y7 841 aa17.98■□□□□ 0.47
LETMD1-220ENST00000549686 CATSPERBQ9H7T0 1116 aa17.98■□□□□ 0.47
LETMD1-220ENST00000549686 KIF9Q9HAQ2 790 aa17.98■□□□□ 0.47
LETMD1-220ENST00000549686 CWC15Q9P013 229 aaKnown RBP17.98■□□□□ 0.47
LETMD1-220ENST00000549686 PPARGC1AQ9UBK2 798 aaKnown RBP17.98■□□□□ 0.47
LETMD1-220ENST00000549686 STOML2Q9UJZ1 356 aa17.98■□□□□ 0.47
LETMD1-220ENST00000549686 HS3ST4Q9Y661 456 aa17.98■□□□□ 0.47
LETMD1-220ENST00000549686 ATG2AQ2TAZ0 1938 aa17.98■□□□□ 0.47
LETMD1-220ENST00000549686 SOX1O00570 391 aaPredicted RBP17.97■□□□□ 0.47
LETMD1-220ENST00000549686 APOL1O14791 398 aa17.97■□□□□ 0.47
LETMD1-220ENST00000549686 CST8O60676 142 aa17.97■□□□□ 0.47
LETMD1-220ENST00000549686 LRIG2O94898 1065 aa17.97■□□□□ 0.47
LETMD1-220ENST00000549686 KRT10P13645 584 aa17.97■□□□□ 0.47
LETMD1-220ENST00000549686 GOT1P17174 413 aa17.97■□□□□ 0.47
LETMD1-220ENST00000549686 IGFBP4P22692 258 aa17.97■□□□□ 0.47
LETMD1-220ENST00000549686 CORO1AP31146 461 aaKnown RBP17.97■□□□□ 0.47
LETMD1-220ENST00000549686 DPYSQ14117 519 aa17.97■□□□□ 0.47
LETMD1-220ENST00000549686 MS4A13Q5J8X5 152 aa17.97■□□□□ 0.47
LETMD1-220ENST00000549686 PIK3R6Q5UE93 754 aa17.97■□□□□ 0.47
LETMD1-220ENST00000549686 BZW1Q7L1Q6 419 aaKnown RBP17.97■□□□□ 0.47
LETMD1-220ENST00000549686 ANKS1BQ7Z6G8 1248 aa17.97■□□□□ 0.47
LETMD1-220ENST00000549686 PCDH19Q8TAB3 1148 aa17.97■□□□□ 0.47
LETMD1-220ENST00000549686 SIK2Q9H0K1 926 aa17.97■□□□□ 0.47
LETMD1-220ENST00000549686 TMPRSS4Q9NRS4 437 aa17.97■□□□□ 0.47
LETMD1-220ENST00000549686 GKN1Q9NS71 199 aa17.97■□□□□ 0.47
LETMD1-220ENST00000549686 SMPD4Q9NXE4 827 aa17.97■□□□□ 0.47
LETMD1-220ENST00000549686 CLDND1Q9NY35 253 aa17.97■□□□□ 0.47
LETMD1-220ENST00000549686 GDE1Q9NZC3 331 aa17.97■□□□□ 0.47
LETMD1-220ENST00000549686 CLEC1BQ9P126 229 aa17.97■□□□□ 0.47
LETMD1-220ENST00000549686 SH3BP1Q9Y3L3 701 aa17.97■□□□□ 0.47
LETMD1-220ENST00000549686 E2F8A0AVK6 867 aa17.96■□□□□ 0.47
LETMD1-220ENST00000549686 E9PAM4 449 aa17.96■□□□□ 0.47
LETMD1-220ENST00000549686 F5H5T6 163 aa17.96■□□□□ 0.47
LETMD1-220ENST00000549686 APOC4-APOC2K7ER74 178 aa17.96■□□□□ 0.47
LETMD1-220ENST00000549686 RIOK3O14730 519 aaKnown RBP17.96■□□□□ 0.47
LETMD1-220ENST00000549686 ZNF189O75820 626 aaPredicted RBP17.96■□□□□ 0.47
LETMD1-220ENST00000549686 APOC2P02655 101 aa17.96■□□□□ 0.47
LETMD1-220ENST00000549686 CEBPBP17676 345 aa17.96■□□□□ 0.47
LETMD1-220ENST00000549686 EPHB2P29323 1055 aa17.96■□□□□ 0.47
LETMD1-220ENST00000549686 MTHFRP42898 656 aa17.96■□□□□ 0.47
LETMD1-220ENST00000549686 NR2C2P49116 596 aa17.96■□□□□ 0.47
LETMD1-220ENST00000549686 MMRN1Q13201 1228 aa17.96■□□□□ 0.47
LETMD1-220ENST00000549686 AUHQ13825 339 aaKnown RBP17.96■□□□□ 0.47
LETMD1-220ENST00000549686 CYP1B1Q16678 543 aa17.96■□□□□ 0.47
LETMD1-220ENST00000549686 STXBP5Q5T5C0 1151 aa17.96■□□□□ 0.47
LETMD1-220ENST00000549686 ADGRF1Q5T601 910 aa17.96■□□□□ 0.47
LETMD1-220ENST00000549686 HTR3DQ70Z44 454 aa17.96■□□□□ 0.47
LETMD1-220ENST00000549686 C12orf50Q8NA57 414 aaPredicted RBP17.96■□□□□ 0.47
LETMD1-220ENST00000549686 PRMT1Q99873 361 aaKnown RBP17.96■□□□□ 0.47
LETMD1-220ENST00000549686 ARHGEF4Q9NR80 690 aa17.96■□□□□ 0.47
LETMD1-220ENST00000549686 TDP1Q9NUW8 608 aa17.96■□□□□ 0.47
LETMD1-220ENST00000549686 SMARCAL1Q9NZC9 954 aa17.96■□□□□ 0.47
LETMD1-220ENST00000549686 RAD54BQ9Y620 910 aa17.96■□□□□ 0.47
LETMD1-220ENST00000549686 TRIOBPQ9H2D6 2365 aa17.96■□□□□ 0.47
LETMD1-220ENST00000549686 IGLV3-10A0A075B6K4 115 aa17.95■□□□□ 0.46
LETMD1-220ENST00000549686 FAM72CH0Y354 149 aa17.95■□□□□ 0.46
LETMD1-220ENST00000549686 PHF2O75151 1096 aa17.95■□□□□ 0.46
LETMD1-220ENST00000549686 IRF1P10914 325 aa17.95■□□□□ 0.46
LETMD1-220ENST00000549686 CHRNA3P32297 505 aa17.95■□□□□ 0.46
LETMD1-220ENST00000549686 SERPINB6P35237 376 aa17.95■□□□□ 0.46
LETMD1-220ENST00000549686 SIX1Q15475 284 aaPredicted RBP17.95■□□□□ 0.46
LETMD1-220ENST00000549686 CCNG2Q16589 344 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms