RNA–Protein interactions for RNA: ENST00000549274.1

SMARCD1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-206ENST00000549274 HMBSP08397 361 aa10.11□□□□□ -0.79
SMARCD1-206ENST00000549274 IRF1P10914 325 aa10.11□□□□□ -0.79
SMARCD1-206ENST00000549274 ZFXP17010 805 aaPredicted RBP10.11□□□□□ -0.79
SMARCD1-206ENST00000549274 DEKP35659 375 aaKnown RBP10.11□□□□□ -0.79
SMARCD1-206ENST00000549274 ETFBP38117 255 aa10.11□□□□□ -0.79
SMARCD1-206ENST00000549274 HCAR3P49019 387 aa10.11□□□□□ -0.79
SMARCD1-206ENST00000549274 PGFP49763 221 aa10.11□□□□□ -0.79
SMARCD1-206ENST00000549274 RWDD2BP57060 319 aa10.11□□□□□ -0.79
SMARCD1-206ENST00000549274 FCHO2Q0JRZ9 810 aa10.11□□□□□ -0.79
SMARCD1-206ENST00000549274 KRT81Q14533 505 aa10.11□□□□□ -0.79
SMARCD1-206ENST00000549274 RPS6KA1Q15418 735 aa10.11□□□□□ -0.79
SMARCD1-206ENST00000549274 DPYSL2Q16555 572 aa10.11□□□□□ -0.79
SMARCD1-206ENST00000549274 MPPE1Q53F39 396 aa10.11□□□□□ -0.79
SMARCD1-206ENST00000549274 ZC3H12AQ5D1E8 599 aaKnown RBP10.11□□□□□ -0.79
SMARCD1-206ENST00000549274 ZNF569Q5MCW4 686 aa10.11□□□□□ -0.79
SMARCD1-206ENST00000549274 STXBP5Q5T5C0 1151 aa10.11□□□□□ -0.79
SMARCD1-206ENST00000549274 OTUD1Q5VV17 481 aaPredicted RBP10.11□□□□□ -0.79
SMARCD1-206ENST00000549274 Q6ZNB5 142 aa10.11□□□□□ -0.79
SMARCD1-206ENST00000549274 NUDT18Q6ZVK8 323 aa10.11□□□□□ -0.79
SMARCD1-206ENST00000549274 CHSY1Q86X52 802 aa10.11□□□□□ -0.79
SMARCD1-206ENST00000549274 ADHFE1Q8IWW8 467 aa10.11□□□□□ -0.79
SMARCD1-206ENST00000549274 FAM217AQ8IXS0 508 aa10.11□□□□□ -0.79
SMARCD1-206ENST00000549274 KATNAL2Q8IYT4 538 aa10.11□□□□□ -0.79
SMARCD1-206ENST00000549274 CPA6Q8N4T0 437 aa10.11□□□□□ -0.79
SMARCD1-206ENST00000549274 OSCP1Q8WVF1 389 aa10.11□□□□□ -0.79
SMARCD1-206ENST00000549274 MAIP1Q8WWC4 291 aa10.11□□□□□ -0.79
SMARCD1-206ENST00000549274 IRF7Q92985 503 aa10.11□□□□□ -0.79
SMARCD1-206ENST00000549274 BTBD6Q96KE9 485 aa10.11□□□□□ -0.79
SMARCD1-206ENST00000549274 SLC22A12Q96S37 553 aa10.11□□□□□ -0.79
SMARCD1-206ENST00000549274 ZNF670Q9BS34 389 aa10.11□□□□□ -0.79
SMARCD1-206ENST00000549274 TRMT61BQ9BVS5 477 aaKnown RBP10.11□□□□□ -0.79
SMARCD1-206ENST00000549274 TRIM7Q9C029 511 aa10.11□□□□□ -0.79
SMARCD1-206ENST00000549274 TRPV5Q9NQA5 729 aa10.11□□□□□ -0.79
SMARCD1-206ENST00000549274 PPARGC1AQ9UBK2 798 aaKnown RBP10.11□□□□□ -0.79
SMARCD1-206ENST00000549274 PCDHA3Q9Y5H8 950 aa10.11□□□□□ -0.79
SMARCD1-206ENST00000549274 CAPN6Q9Y6Q1 641 aa10.11□□□□□ -0.79
SMARCD1-206ENST00000549274 DOCK4Q8N1I0 1966 aa10.1□□□□□ -0.79
SMARCD1-206ENST00000549274 CTAGE9A4FU28 777 aa10.1□□□□□ -0.79
SMARCD1-206ENST00000549274 CES2O00748 559 aa10.1□□□□□ -0.79
SMARCD1-206ENST00000549274 PAGE1O75459 146 aa10.1□□□□□ -0.79
SMARCD1-206ENST00000549274 ZRANB2O95218 330 aaKnown RBP eCLIP10.1□□□□□ -0.79
SMARCD1-206ENST00000549274 PRAMEF12O95522 483 aa10.1□□□□□ -0.79
SMARCD1-206ENST00000549274 MOCS2O96007 188 aaPredicted RBP10.1□□□□□ -0.79
SMARCD1-206ENST00000549274 SERPINB6P35237 376 aa10.1□□□□□ -0.79
SMARCD1-206ENST00000549274 MLLT6P55198 1093 aaPredicted RBP10.1□□□□□ -0.79
SMARCD1-206ENST00000549274 GNG11P61952 73 aa10.1□□□□□ -0.79
SMARCD1-206ENST00000549274 SLC25A11Q02978 314 aaKnown RBP10.1□□□□□ -0.79
SMARCD1-206ENST00000549274 HTR4Q13639 388 aa10.1□□□□□ -0.79
SMARCD1-206ENST00000549274 TFDP2Q14188 446 aa10.1□□□□□ -0.79
SMARCD1-206ENST00000549274 SEL1L2Q5TEA6 688 aa10.1□□□□□ -0.79
SMARCD1-206ENST00000549274 MEI1Q5TIA1 1274 aa10.1□□□□□ -0.79
SMARCD1-206ENST00000549274 BZW1Q7L1Q6 419 aaKnown RBP10.1□□□□□ -0.79
SMARCD1-206ENST00000549274 NT5DC3Q86UY8 548 aa10.1□□□□□ -0.79
SMARCD1-206ENST00000549274 DENND1CQ8IV53 801 aa10.1□□□□□ -0.79
SMARCD1-206ENST00000549274 RCOR2Q8IZ40 523 aa10.1□□□□□ -0.79
SMARCD1-206ENST00000549274 LZTR1Q8N653 840 aa10.1□□□□□ -0.79
SMARCD1-206ENST00000549274 KCTD6Q8NC69 237 aa10.1□□□□□ -0.79
SMARCD1-206ENST00000549274 HJURPQ8NCD3 748 aaPredicted RBP10.1□□□□□ -0.79
SMARCD1-206ENST00000549274 EXD1Q8NHP7 514 aa10.1□□□□□ -0.79
SMARCD1-206ENST00000549274 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.1□□□□□ -0.79
SMARCD1-206ENST00000549274 DNASE1L2Q92874 299 aa10.1□□□□□ -0.79
SMARCD1-206ENST00000549274 CD101Q93033 1021 aa10.1□□□□□ -0.79
SMARCD1-206ENST00000549274 TBC1D31Q96DN5 1066 aa10.1□□□□□ -0.79
SMARCD1-206ENST00000549274 ZSWIM3Q96MP5 696 aa10.1□□□□□ -0.79
SMARCD1-206ENST00000549274 NAP1L3Q99457 506 aaPredicted RBP10.1□□□□□ -0.79
SMARCD1-206ENST00000549274 SNRNP25Q9BV90 132 aaKnown RBP10.1□□□□□ -0.79
SMARCD1-206ENST00000549274 MAK16Q9BXY0 300 aaKnown RBP10.1□□□□□ -0.79
SMARCD1-206ENST00000549274 CARD9Q9H257 536 aa10.1□□□□□ -0.79
SMARCD1-206ENST00000549274 DHX35Q9H5Z1 703 aaKnown RBP10.1□□□□□ -0.79
SMARCD1-206ENST00000549274 GKN1Q9NS71 199 aa10.1□□□□□ -0.79
SMARCD1-206ENST00000549274 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.1□□□□□ -0.793e-6■□□□□ 8.8
SMARCD1-206ENST00000549274 DUS2Q9NX74 493 aaKnown RBP10.1□□□□□ -0.79
SMARCD1-206ENST00000549274 TRIM10Q9UDY6 481 aa10.1□□□□□ -0.79
SMARCD1-206ENST00000549274 OR12D3Q9UGF7 316 aa10.1□□□□□ -0.79
SMARCD1-206ENST00000549274 PCSK1NQ9UHG2 260 aa10.1□□□□□ -0.79
SMARCD1-206ENST00000549274 SALL4Q9UJQ4 1053 aa10.1□□□□□ -0.79
SMARCD1-206ENST00000549274 AGO1Q9UL18 857 aaKnown RBP10.1□□□□□ -0.79
SMARCD1-206ENST00000549274 EFR3BQ9Y2G0 817 aa10.1□□□□□ -0.79
SMARCD1-206ENST00000549274 A0A1B0GVM2 712 aa10.09□□□□□ -0.79
SMARCD1-206ENST00000549274 TCAF2A6NFQ2 919 aa10.09□□□□□ -0.79
SMARCD1-206ENST00000549274 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.09□□□□□ -0.79
SMARCD1-206ENST00000549274 C2CD4DB7Z1M9 353 aa10.09□□□□□ -0.79
SMARCD1-206ENST00000549274 LOC730098B7Z3J9 87 aa10.09□□□□□ -0.79
SMARCD1-206ENST00000549274 DAPK3O43293 454 aa10.09□□□□□ -0.79
SMARCD1-206ENST00000549274 CLDN11O75508 207 aa10.09□□□□□ -0.79
SMARCD1-206ENST00000549274 RARAP10276 462 aa10.09□□□□□ -0.79
SMARCD1-206ENST00000549274 GLULP15104 373 aa10.09□□□□□ -0.79
SMARCD1-206ENST00000549274 TCP1P17987 556 aaKnown RBP10.09□□□□□ -0.79
SMARCD1-206ENST00000549274 TFE3P19532 575 aaPredicted RBP10.09□□□□□ -0.79
SMARCD1-206ENST00000549274 TACR2P21452 398 aa10.09□□□□□ -0.79
SMARCD1-206ENST00000549274 FCARP24071 287 aa10.09□□□□□ -0.79
SMARCD1-206ENST00000549274 KCNQ1P51787 676 aa10.09□□□□□ -0.79
SMARCD1-206ENST00000549274 CDH6P55285 790 aa10.09□□□□□ -0.79
SMARCD1-206ENST00000549274 TPI1P60174 286 aa10.09□□□□□ -0.79
SMARCD1-206ENST00000549274 ETF1P62495 437 aaKnown RBP10.09□□□□□ -0.79
SMARCD1-206ENST00000549274 PITX1P78337 314 aaPredicted RBP10.09□□□□□ -0.79
SMARCD1-206ENST00000549274 GAD2Q05329 585 aa10.09□□□□□ -0.79
SMARCD1-206ENST00000549274 SLC12A1Q13621 1099 aa10.09□□□□□ -0.79
SMARCD1-206ENST00000549274 TUBB2AQ13885 445 aa10.09□□□□□ -0.79
SMARCD1-206ENST00000549274 PPP2R5EQ16537 467 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms