RNA–Protein interactions for RNA: ENST00000548771.1

CCDC38-206, Transcript of coiled-coil domain containing 38, humanhuman

TSL 3

Gene CCDC38, Length 470 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-206ENST00000548771 PGM5Q15124 567 aa4.63□□□□□ -1.67
CCDC38-206ENST00000548771 INPP5JQ15735 1006 aaPredicted RBP4.63□□□□□ -1.67
CCDC38-206ENST00000548771 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.63□□□□□ -1.67
CCDC38-206ENST00000548771 RBMXL3Q8N7X1 1067 aaKnown RBP4.63□□□□□ -1.67
CCDC38-206ENST00000548771 ZFPM2Q8WW38 1151 aa4.63□□□□□ -1.67
CCDC38-206ENST00000548771 PAAF1Q9BRP4 392 aa4.63□□□□□ -1.67
CCDC38-206ENST00000548771 MAGEB5Q9BZ81 275 aa4.63□□□□□ -1.67
CCDC38-206ENST00000548771 PCDHAC1Q9H158 963 aa4.63□□□□□ -1.67
CCDC38-206ENST00000548771 ERVK-5Q9HDB9 667 aa4.63□□□□□ -1.67
CCDC38-206ENST00000548771 ZNF335Q9H4Z2 1342 aaPredicted RBP4.63□□□□□ -1.67
CCDC38-206ENST00000548771 ZSCAN9O15535 394 aaPredicted RBP4.62□□□□□ -1.67
CCDC38-206ENST00000548771 UGDHO60701 494 aa4.62□□□□□ -1.67
CCDC38-206ENST00000548771 PQBP1O60828 265 aaKnown RBP4.62□□□□□ -1.67
CCDC38-206ENST00000548771 CDKN2AP42771 156 aaKnown RBP4.62□□□□□ -1.67
CCDC38-206ENST00000548771 BFSP2Q13515 415 aa4.62□□□□□ -1.67
CCDC38-206ENST00000548771 SMTNL2Q2TAL5 461 aa4.62□□□□□ -1.67
CCDC38-206ENST00000548771 PRTGQ2VWP7 1150 aa4.62□□□□□ -1.67
CCDC38-206ENST00000548771 C16orf89Q6UX73 402 aa4.62□□□□□ -1.67
CCDC38-206ENST00000548771 BEND5Q7L4P6 421 aa4.62□□□□□ -1.67
CCDC38-206ENST00000548771 SNX27Q96L92 541 aa4.62□□□□□ -1.67
CCDC38-206ENST00000548771 WDR83Q9BRX9 315 aaKnown RBP4.62□□□□□ -1.67
CCDC38-206ENST00000548771 ELOVL1Q9BW60 279 aa4.62□□□□□ -1.67
CCDC38-206ENST00000548771 IL21RQ9HBE5 538 aa4.62□□□□□ -1.67
CCDC38-206ENST00000548771 KCNK9Q9NPC2 374 aa4.62□□□□□ -1.67
CCDC38-206ENST00000548771 KPNA5O15131 536 aa4.61□□□□□ -1.67
CCDC38-206ENST00000548771 AKR1A1P14550 325 aa4.61□□□□□ -1.67
CCDC38-206ENST00000548771 PECAM1P16284 738 aaPredicted RBP4.61□□□□□ -1.67
CCDC38-206ENST00000548771 ATF3P18847 181 aa4.61□□□□□ -1.67
CCDC38-206ENST00000548771 ARRB2P32121 409 aa4.61□□□□□ -1.67
CCDC38-206ENST00000548771 PRIM2P49643 509 aa4.61□□□□□ -1.67
CCDC38-206ENST00000548771 PGGT1BP53609 377 aa4.61□□□□□ -1.67
CCDC38-206ENST00000548771 MSANTD2Q6P1R3 559 aa4.61□□□□□ -1.67
CCDC38-206ENST00000548771 DLK2Q6UY11 383 aa4.61□□□□□ -1.67
CCDC38-206ENST00000548771 ADGRF4Q8IZF3 695 aa4.61□□□□□ -1.67
CCDC38-206ENST00000548771 GLIS1Q8NBF1 620 aa4.61□□□□□ -1.67
CCDC38-206ENST00000548771 KAT2BQ92831 832 aa4.61□□□□□ -1.67
CCDC38-206ENST00000548771 CTAGE1Q96RT6 745 aa4.61□□□□□ -1.67
CCDC38-206ENST00000548771 WWOXQ9NZC7 414 aa4.61□□□□□ -1.67
CCDC38-206ENST00000548771 B3GNT3Q9Y2A9 372 aa4.61□□□□□ -1.67
CCDC38-206ENST00000548771 SLC28A2O43868 658 aa4.6□□□□□ -1.67
CCDC38-206ENST00000548771 KAT7O95251 611 aa4.6□□□□□ -1.67
CCDC38-206ENST00000548771 NDST3O95803 873 aa4.6□□□□□ -1.67
CCDC38-206ENST00000548771 SLC8A1P32418 973 aa4.6□□□□□ -1.67
CCDC38-206ENST00000548771 DLGAP5Q15398 846 aa4.6□□□□□ -1.67
CCDC38-206ENST00000548771 GLE1Q53GS7 698 aaKnown RBP4.6□□□□□ -1.67
CCDC38-206ENST00000548771 KIAA1755Q5JYT7 1200 aa4.6□□□□□ -1.67
CCDC38-206ENST00000548771 NUGGCQ68CJ6 796 aa4.6□□□□□ -1.67
CCDC38-206ENST00000548771 KRTAP5-1Q6L8H4 278 aa4.6□□□□□ -1.67
CCDC38-206ENST00000548771 EME1Q96AY2 570 aa4.6□□□□□ -1.67
CCDC38-206ENST00000548771 EIF2AQ9BY44 585 aaKnown RBP4.6□□□□□ -1.67
CCDC38-206ENST00000548771 MRPL44Q9H9J2 332 aaKnown RBP4.6□□□□□ -1.67
CCDC38-206ENST00000548771 FZD3Q9NPG1 666 aa4.6□□□□□ -1.67
CCDC38-206ENST00000548771 FSCN3Q9NQT6 498 aa4.6□□□□□ -1.67
CCDC38-206ENST00000548771 RGL1Q9NZL6 768 aa4.6□□□□□ -1.67
CCDC38-206ENST00000548771 MAN2B2Q9Y2E5 1009 aa4.6□□□□□ -1.67
CCDC38-206ENST00000548771 A6NNC1 897 aa4.59□□□□□ -1.67
CCDC38-206ENST00000548771 C4orf47A7E2U8 309 aa4.59□□□□□ -1.67
CCDC38-206ENST00000548771 APOL1O14791 398 aa4.59□□□□□ -1.67
CCDC38-206ENST00000548771 PPP6R2O75170 966 aa4.59□□□□□ -1.67
CCDC38-206ENST00000548771 VIPP01282 170 aa4.59□□□□□ -1.67
CCDC38-206ENST00000548771 SLC3A2P08195 630 aaKnown RBP4.59□□□□□ -1.67
CCDC38-206ENST00000548771 GSTM5P46439 218 aa4.59□□□□□ -1.67
CCDC38-206ENST00000548771 STT3AP46977 705 aa4.59□□□□□ -1.67
CCDC38-206ENST00000548771 P2RX3P56373 397 aa4.59□□□□□ -1.67
CCDC38-206ENST00000548771 MAPKAPK3Q16644 382 aa4.59□□□□□ -1.67
CCDC38-206ENST00000548771 ARHGAP15Q53QZ3 475 aa4.59□□□□□ -1.67
CCDC38-206ENST00000548771 LIPMQ5VYY2 423 aa4.59□□□□□ -1.67
CCDC38-206ENST00000548771 DHRS13Q6UX07 377 aa4.59□□□□□ -1.67
CCDC38-206ENST00000548771 ADHFE1Q8IWW8 467 aa4.59□□□□□ -1.67
CCDC38-206ENST00000548771 PAQR4Q8N4S7 273 aaPredicted RBP4.59□□□□□ -1.67
CCDC38-206ENST00000548771 SMRP1Q8NCR6 262 aa4.59□□□□□ -1.67
CCDC38-206ENST00000548771 CCDC150Q8NCX0 1101 aa4.59□□□□□ -1.67
CCDC38-206ENST00000548771 OR52N4Q8NGI2 321 aa4.59□□□□□ -1.67
CCDC38-206ENST00000548771 ASB5Q8WWX0 329 aa4.59□□□□□ -1.67
CCDC38-206ENST00000548771 NPIPB3Q92617 1050 aa4.59□□□□□ -1.67
CCDC38-206ENST00000548771 THOC3Q96J01 351 aaKnown RBP4.59□□□□□ -1.67
CCDC38-206ENST00000548771 ZNF479Q96JC4 524 aa4.59□□□□□ -1.67
CCDC38-206ENST00000548771 GPR78Q96P69 363 aa4.59□□□□□ -1.67
CCDC38-206ENST00000548771 ZNF347Q96SE7 839 aa4.59□□□□□ -1.67
CCDC38-206ENST00000548771 NAA15Q9BXJ9 866 aaKnown RBP4.59□□□□□ -1.67
CCDC38-206ENST00000548771 SPAG4Q9NPE6 437 aa4.59□□□□□ -1.67
CCDC38-206ENST00000548771 DTNAQ9Y4J8 743 aa4.59□□□□□ -1.67
CCDC38-206ENST00000548771 NPC1O15118 1278 aa4.58□□□□□ -1.68
CCDC38-206ENST00000548771 SYF2O95926 243 aaKnown RBP4.58□□□□□ -1.68
CCDC38-206ENST00000548771 IFNA2P01563 188 aa4.58□□□□□ -1.68
CCDC38-206ENST00000548771 NSUN2Q08J23 767 aaKnown RBP eCLIP4.58□□□□□ -1.68
CCDC38-206ENST00000548771 PTGR1Q14914 329 aa4.58□□□□□ -1.68
CCDC38-206ENST00000548771 ANXA2RQ3ZCQ2 193 aa4.58□□□□□ -1.68
CCDC38-206ENST00000548771 ISM2Q6H9L7 571 aa4.58□□□□□ -1.68
CCDC38-206ENST00000548771 HIBCHQ6NVY1 386 aaPredicted RBP4.58□□□□□ -1.68
CCDC38-206ENST00000548771 CCDC33Q8N5R6 958 aa4.58□□□□□ -1.68
CCDC38-206ENST00000548771 FAM47BQ8NA70 645 aa4.58□□□□□ -1.68
CCDC38-206ENST00000548771 BRI3BPQ8WY22 251 aa4.58□□□□□ -1.68
CCDC38-206ENST00000548771 GRAMD1AQ96CP6 724 aa4.58□□□□□ -1.68
CCDC38-206ENST00000548771 CLMNQ96JQ2 1002 aa4.58□□□□□ -1.68
CCDC38-206ENST00000548771 ZPBPQ9BS86 351 aa4.58□□□□□ -1.68
CCDC38-206ENST00000548771 SARGQ9BW04 601 aa4.58□□□□□ -1.68
CCDC38-206ENST00000548771 STARD7Q9NQZ5 370 aa4.58□□□□□ -1.68
CCDC38-206ENST00000548771 UTS2RQ9UKP6 389 aa4.58□□□□□ -1.68
CCDC38-206ENST00000548771 LAMP3Q9UQV4 416 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms