RNA–Protein interactions for RNA: ENST00000548573.5

SMARCD1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5 BASIC

Gene SMARCD1, Length 2,095 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-205ENST00000548573 BTBD9Q96Q07 612 aa10.17□□□□□ -0.78
SMARCD1-205ENST00000548573 HAPLN3Q96S86 360 aa10.17□□□□□ -0.78
SMARCD1-205ENST00000548573 MMP19Q99542 508 aa10.17□□□□□ -0.78
SMARCD1-205ENST00000548573 GPR20Q99678 358 aa10.17□□□□□ -0.78
SMARCD1-205ENST00000548573 NAT9Q9BTE0 207 aa10.17□□□□□ -0.78
SMARCD1-205ENST00000548573 SLC4A5Q9BY07 1137 aa10.17□□□□□ -0.78
SMARCD1-205ENST00000548573 XPNPEP3Q9NQH7 507 aa10.17□□□□□ -0.78
SMARCD1-205ENST00000548573 PRMT7Q9NVM4 692 aaPredicted RBP10.17□□□□□ -0.78
SMARCD1-205ENST00000548573 BTBD7Q9P203 1132 aa10.17□□□□□ -0.78
SMARCD1-205ENST00000548573 COPG2Q9UBF2 871 aa10.17□□□□□ -0.78
SMARCD1-205ENST00000548573 ADAMTS6Q9UKP5 1117 aa10.17□□□□□ -0.78
SMARCD1-205ENST00000548573 POMPQ9Y244 141 aa10.17□□□□□ -0.78
SMARCD1-205ENST00000548573 SF3B1O75533 1304 aaKnown RBP eCLIP10.16□□□□□ -0.784e-7■■■■■ 133.7
SMARCD1-205ENST00000548573 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.16□□□□□ -0.78
SMARCD1-205ENST00000548573 WDR27A2RRH5 827 aa10.16□□□□□ -0.78
SMARCD1-205ENST00000548573 SOWAHBA6NEL2 793 aa10.16□□□□□ -0.78
SMARCD1-205ENST00000548573 A6NJR5 290 aa10.16□□□□□ -0.78
SMARCD1-205ENST00000548573 HACD1B0YJ81 288 aa10.16□□□□□ -0.78
SMARCD1-205ENST00000548573 PRKCGP05129 697 aa10.16□□□□□ -0.78
SMARCD1-205ENST00000548573 ITGA2BP08514 1039 aa10.16□□□□□ -0.78
SMARCD1-205ENST00000548573 CCDC130P13994 396 aa10.16□□□□□ -0.78
SMARCD1-205ENST00000548573 VCLP18206 1134 aa10.16□□□□□ -0.78
SMARCD1-205ENST00000548573 PGAM1P18669 254 aa10.16□□□□□ -0.78
SMARCD1-205ENST00000548573 ITGAXP20702 1163 aa10.16□□□□□ -0.78
SMARCD1-205ENST00000548573 PTPN9P43378 593 aa10.16□□□□□ -0.78
SMARCD1-205ENST00000548573 EPHB1P54762 984 aa10.16□□□□□ -0.78
SMARCD1-205ENST00000548573 SNX16P57768 344 aa10.16□□□□□ -0.78
SMARCD1-205ENST00000548573 ABCE1P61221 599 aaKnown RBP10.16□□□□□ -0.78
SMARCD1-205ENST00000548573 MSLNQ13421 630 aaPredicted RBP10.16□□□□□ -0.78
SMARCD1-205ENST00000548573 PDCD2Q16342 344 aaPredicted RBP10.16□□□□□ -0.78
SMARCD1-205ENST00000548573 KYAT1Q16773 422 aa10.16□□□□□ -0.78
SMARCD1-205ENST00000548573 FAM187BQ17R55 369 aa10.16□□□□□ -0.78
SMARCD1-205ENST00000548573 GOLGA7BQ2TAP0 167 aa10.16□□□□□ -0.78
SMARCD1-205ENST00000548573 PKDCCQ504Y2 493 aa10.16□□□□□ -0.78
SMARCD1-205ENST00000548573 C10orf107Q8IVU9 208 aa10.16□□□□□ -0.78
SMARCD1-205ENST00000548573 FBXW8Q8N3Y1 598 aa10.16□□□□□ -0.78
SMARCD1-205ENST00000548573 POU5F2Q8N7G0 328 aa10.16□□□□□ -0.78
SMARCD1-205ENST00000548573 SHKBP1Q8TBC3 707 aa10.16□□□□□ -0.78
SMARCD1-205ENST00000548573 GDPD5Q8WTR4 605 aa10.16□□□□□ -0.78
SMARCD1-205ENST00000548573 LRRN4Q8WUT4 740 aa10.16□□□□□ -0.78
SMARCD1-205ENST00000548573 DTNBP1Q96EV8 351 aa10.16□□□□□ -0.78
SMARCD1-205ENST00000548573 EIF2B3Q9NR50 452 aaKnown RBP10.16□□□□□ -0.78
SMARCD1-205ENST00000548573 PNPOQ9NVS9 261 aa10.16□□□□□ -0.78
SMARCD1-205ENST00000548573 HESX1Q9UBX0 185 aa10.16□□□□□ -0.78
SMARCD1-205ENST00000548573 KAT6AQ92794 2004 aa10.16□□□□□ -0.78
SMARCD1-205ENST00000548573 A0A0A0MRY4 1105 aa10.16□□□□□ -0.78
SMARCD1-205ENST00000548573 GJB1P08034 283 aa10.16□□□□□ -0.78
SMARCD1-205ENST00000548573 RALBP11234 206 aa10.16□□□□□ -0.78
SMARCD1-205ENST00000548573 MX2P20592 715 aa10.16□□□□□ -0.78
SMARCD1-205ENST00000548573 ADORA2AP29274 412 aa10.16□□□□□ -0.78
SMARCD1-205ENST00000548573 RGS7P49802 495 aa10.16□□□□□ -0.78
SMARCD1-205ENST00000548573 SLC26A2P50443 739 aa10.16□□□□□ -0.78
SMARCD1-205ENST00000548573 RBP5P82980 135 aa10.16□□□□□ -0.78
SMARCD1-205ENST00000548573 POU5F1BQ06416 359 aa10.16□□□□□ -0.78
SMARCD1-205ENST00000548573 PRKG1Q13976 671 aa10.16□□□□□ -0.78
SMARCD1-205ENST00000548573 TMEM132DQ14C87 1099 aa10.16□□□□□ -0.78
SMARCD1-205ENST00000548573 LY6KQ17RY6 165 aa10.16□□□□□ -0.78
SMARCD1-205ENST00000548573 CCDC153Q494R4 210 aa10.16□□□□□ -0.78
SMARCD1-205ENST00000548573 FSCBQ5H9T9 825 aa10.16□□□□□ -0.78
SMARCD1-205ENST00000548573 METTL21CQ5VZV1 264 aa10.16□□□□□ -0.78
SMARCD1-205ENST00000548573 LPCAT4Q643R3 524 aa10.16□□□□□ -0.78
SMARCD1-205ENST00000548573 PMF1Q6P1K2 205 aa10.16□□□□□ -0.78
SMARCD1-205ENST00000548573 KBTBD6Q86V97 674 aa10.16□□□□□ -0.78
SMARCD1-205ENST00000548573 UNC5BQ8IZJ1 945 aa10.16□□□□□ -0.78
SMARCD1-205ENST00000548573 TMEM130Q8N3G9 435 aa10.16□□□□□ -0.78
SMARCD1-205ENST00000548573 SLC35F5Q8WV83 523 aa10.16□□□□□ -0.78
SMARCD1-205ENST00000548573 HTR3CQ8WXA8 447 aa10.16□□□□□ -0.78
SMARCD1-205ENST00000548573 CENPIQ92674 756 aaPredicted RBP10.16□□□□□ -0.78
SMARCD1-205ENST00000548573 SPATA13Q96N96 652 aa10.16□□□□□ -0.78
SMARCD1-205ENST00000548573 KCNK16Q96T55 309 aa10.16□□□□□ -0.78
SMARCD1-205ENST00000548573 C11orf84Q9BUA3 381 aaPredicted RBP10.16□□□□□ -0.78
SMARCD1-205ENST00000548573 EPB41L1Q9H4G0 881 aa10.16□□□□□ -0.78
SMARCD1-205ENST00000548573 MINDY3Q9H8M7 445 aa10.16□□□□□ -0.78
SMARCD1-205ENST00000548573 NDUFA13Q9P0J0 144 aa10.16□□□□□ -0.78
SMARCD1-205ENST00000548573 ARHGAP26Q9UNA1 814 aa10.16□□□□□ -0.78
SMARCD1-205ENST00000548573 SMIM31A0A1B0GVY4 71 aa10.15□□□□□ -0.78
SMARCD1-205ENST00000548573 PAPSS1O43252 624 aaPredicted RBP10.15□□□□□ -0.78
SMARCD1-205ENST00000548573 DGKIO75912 1065 aa10.15□□□□□ -0.78
SMARCD1-205ENST00000548573 PDE5AO76074 875 aa10.15□□□□□ -0.78
SMARCD1-205ENST00000548573 IQCF3P0C7M6 154 aa10.15□□□□□ -0.78
SMARCD1-205ENST00000548573 RAG1P15918 1043 aa10.15□□□□□ -0.78
SMARCD1-205ENST00000548573 DPEP1P16444 411 aa10.15□□□□□ -0.78
SMARCD1-205ENST00000548573 PEX2P28328 305 aa10.15□□□□□ -0.78
SMARCD1-205ENST00000548573 GARSP41250 739 aaKnown RBP10.15□□□□□ -0.78
SMARCD1-205ENST00000548573 AQP4P55087 323 aa10.15□□□□□ -0.78
SMARCD1-205ENST00000548573 MTTPP55157 894 aa10.15□□□□□ -0.78
SMARCD1-205ENST00000548573 SLC5A9Q2M3M2 681 aa10.15□□□□□ -0.78
SMARCD1-205ENST00000548573 SLC10A6Q3KNW5 377 aa10.15□□□□□ -0.78
SMARCD1-205ENST00000548573 ANKRD20A4Q4UJ75 823 aa10.15□□□□□ -0.78
SMARCD1-205ENST00000548573 NCBP2-AS2Q69YL0 99 aa10.15□□□□□ -0.78
SMARCD1-205ENST00000548573 EFCAB12Q6NXP0 572 aa10.15□□□□□ -0.78
SMARCD1-205ENST00000548573 CASC4Q6P4E1 433 aa10.15□□□□□ -0.78
SMARCD1-205ENST00000548573 POTEAQ6S8J7 498 aa10.15□□□□□ -0.78
SMARCD1-205ENST00000548573 LBX2Q6XYB7 198 aa10.15□□□□□ -0.78
SMARCD1-205ENST00000548573 ATG14Q6ZNE5 492 aa10.15□□□□□ -0.78
SMARCD1-205ENST00000548573 TTC30AQ86WT1 665 aa10.15□□□□□ -0.78
SMARCD1-205ENST00000548573 TRIM50Q86XT4 487 aa10.15□□□□□ -0.78
SMARCD1-205ENST00000548573 NT5DC4Q86YG4 428 aa10.15□□□□□ -0.78
SMARCD1-205ENST00000548573 RIOX2Q8IUF8 465 aa10.15□□□□□ -0.78
SMARCD1-205ENST00000548573 DEFB107AQ8IZN7 70 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms