RNA–Protein interactions for RNA: ENST00000547872.1

CBX5-203, Transcript of chromobox 5, humanhuman

TSL 2

Gene CBX5, Length 745 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-203ENST00000547872 MATN4O95460 622 aa4.89□□□□□ -1.63
CBX5-203ENST00000547872 AHSGP02765 367 aa4.89□□□□□ -1.63
CBX5-203ENST00000547872 IQCF3P0C7M6 154 aa4.89□□□□□ -1.63
CBX5-203ENST00000547872 GOLGA6DP0CG33 693 aa4.89□□□□□ -1.63
CBX5-203ENST00000547872 MYBP10242 640 aa4.89□□□□□ -1.63
CBX5-203ENST00000547872 ITGAMP11215 1152 aa4.89□□□□□ -1.63
CBX5-203ENST00000547872 AKR1B1P15121 316 aa4.89□□□□□ -1.63
CBX5-203ENST00000547872 KCNA2P16389 499 aa4.89□□□□□ -1.63
CBX5-203ENST00000547872 HTR1BP28222 390 aa4.89□□□□□ -1.63
CBX5-203ENST00000547872 CST5P28325 142 aaPredicted RBP4.89□□□□□ -1.63
CBX5-203ENST00000547872 AVPR2P30518 371 aa4.89□□□□□ -1.63
CBX5-203ENST00000547872 AVPR1BP47901 424 aa4.89□□□□□ -1.63
CBX5-203ENST00000547872 KCNJ5P48544 419 aa4.89□□□□□ -1.63
CBX5-203ENST00000547872 RAB1AP62820 205 aa4.89□□□□□ -1.63
CBX5-203ENST00000547872 CNTN2Q02246 1040 aa4.89□□□□□ -1.63
CBX5-203ENST00000547872 GPM6BQ13491 265 aa4.89□□□□□ -1.63
CBX5-203ENST00000547872 FGL2Q14314 439 aa4.89□□□□□ -1.63
CBX5-203ENST00000547872 CYP2A13Q16696 494 aa4.89□□□□□ -1.63
CBX5-203ENST00000547872 ST3GAL2Q16842 350 aa4.89□□□□□ -1.63
CBX5-203ENST00000547872 TCTN1Q2MV58 587 aa4.89□□□□□ -1.63
CBX5-203ENST00000547872 ARHGAP29Q52LW3 1261 aa4.89□□□□□ -1.63
CBX5-203ENST00000547872 ABHD17BQ5VST6 288 aa4.89□□□□□ -1.63
CBX5-203ENST00000547872 ZNF627Q7L945 461 aa4.89□□□□□ -1.63
CBX5-203ENST00000547872 PPP1R3BQ86XI6 285 aa4.89□□□□□ -1.63
CBX5-203ENST00000547872 ULK2Q8IYT8 1036 aa4.89□□□□□ -1.63
CBX5-203ENST00000547872 CFAP52Q8N1V2 620 aa4.89□□□□□ -1.63
CBX5-203ENST00000547872 AMER2Q8N7J2 671 aa4.89□□□□□ -1.63
CBX5-203ENST00000547872 PPP1R35Q8TAP8 253 aa4.89□□□□□ -1.63
CBX5-203ENST00000547872 NEK9Q8TD19 979 aa4.89□□□□□ -1.63
CBX5-203ENST00000547872 TRIB1Q96RU8 372 aa4.89□□□□□ -1.63
CBX5-203ENST00000547872 PIH1D3Q9NQM4 214 aaKnown RBP4.89□□□□□ -1.63
CBX5-203ENST00000547872 PDGFCQ9NRA1 345 aa4.89□□□□□ -1.63
CBX5-203ENST00000547872 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.89□□□□□ -1.63
CBX5-203ENST00000547872 TMEM74BQ9NUR3 256 aa4.89□□□□□ -1.63
CBX5-203ENST00000547872 TBCCD1Q9NVR7 557 aa4.89□□□□□ -1.63
CBX5-203ENST00000547872 MCM9Q9NXL9 1143 aa4.89□□□□□ -1.63
CBX5-203ENST00000547872 GOLGA6AQ9NYA3 693 aa4.89□□□□□ -1.63
CBX5-203ENST00000547872 DKK2Q9UBU2 259 aa4.89□□□□□ -1.63
CBX5-203ENST00000547872 NRBP1Q9UHY1 535 aa4.89□□□□□ -1.63
CBX5-203ENST00000547872 ING1Q9UK53 422 aaPredicted RBP4.89□□□□□ -1.63
CBX5-203ENST00000547872 NLRC5Q86WI3 1866 aa4.89□□□□□ -1.63
CBX5-203ENST00000547872 CACNA1AO00555 2505 aa4.89□□□□□ -1.63
CBX5-203ENST00000547872 CACNA1FO60840 1977 aa4.89□□□□□ -1.63
CBX5-203ENST00000547872 MYO9BQ13459 2157 aa4.88□□□□□ -1.63
CBX5-203ENST00000547872 TRGV11A0A075B6L2 103 aa4.88□□□□□ -1.63
CBX5-203ENST00000547872 CYP2D7A0A087X1C5 515 aa4.88□□□□□ -1.63
CBX5-203ENST00000547872 VWA5AO00534 786 aa4.88□□□□□ -1.63
CBX5-203ENST00000547872 WDR46O15213 610 aaKnown RBP4.88□□□□□ -1.63
CBX5-203ENST00000547872 CIAO1O76071 339 aa4.88□□□□□ -1.63
CBX5-203ENST00000547872 CTNNB1P35222 781 aa4.88□□□□□ -1.63
CBX5-203ENST00000547872 VAV2P52735 878 aa4.88□□□□□ -1.63
CBX5-203ENST00000547872 SNAP25P60880 206 aa4.88□□□□□ -1.63
CBX5-203ENST00000547872 BLOC1S1P78537 153 aa4.88□□□□□ -1.63
CBX5-203ENST00000547872 IKQ13123 557 aaPredicted RBP4.88□□□□□ -1.63
CBX5-203ENST00000547872 OS9Q13438 667 aaPredicted RBP4.88□□□□□ -1.63
CBX5-203ENST00000547872 GEN1Q17RS7 908 aa4.88□□□□□ -1.63
CBX5-203ENST00000547872 EPC2Q52LR7 807 aa4.88□□□□□ -1.63
CBX5-203ENST00000547872 HERC4Q5GLZ8 1057 aaPredicted RBP4.88□□□□□ -1.63
CBX5-203ENST00000547872 KHDC1LQ5JSQ8 128 aa4.88□□□□□ -1.63
CBX5-203ENST00000547872 LAIR1Q6GTX8 287 aa4.88□□□□□ -1.63
CBX5-203ENST00000547872 TAPT1Q6NXT6 567 aa4.88□□□□□ -1.63
CBX5-203ENST00000547872 TATDN1Q6P1N9 297 aa4.88□□□□□ -1.63
CBX5-203ENST00000547872 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.88□□□□□ -1.633e-10■■□□□ 13.4
CBX5-203ENST00000547872 RBM23Q86U06 439 aaKnown RBP4.88□□□□□ -1.63
CBX5-203ENST00000547872 VRK3Q8IV63 474 aa4.88□□□□□ -1.63
CBX5-203ENST00000547872 WDR75Q8IWA0 830 aaKnown RBP4.88□□□□□ -1.63
CBX5-203ENST00000547872 FAM133AQ8N9E0 248 aa4.88□□□□□ -1.63
CBX5-203ENST00000547872 NSUN7Q8NE18 718 aaKnown RBP4.88□□□□□ -1.63
CBX5-203ENST00000547872 OR6J1Q8NGC5 347 aa4.88□□□□□ -1.63
CBX5-203ENST00000547872 SDR42E1Q8WUS8 393 aa4.88□□□□□ -1.63
CBX5-203ENST00000547872 ASB10Q8WXI3 467 aa4.88□□□□□ -1.63
CBX5-203ENST00000547872 CAVIN3Q969G5 261 aa4.88□□□□□ -1.63
CBX5-203ENST00000547872 TMEM125Q96AQ2 219 aa4.88□□□□□ -1.63
CBX5-203ENST00000547872 PABPC5Q96DU9 382 aaKnown RBP4.88□□□□□ -1.63
CBX5-203ENST00000547872 MRPL38Q96DV4 380 aaKnown RBP4.88□□□□□ -1.63
CBX5-203ENST00000547872 YME1L1Q96TA2 773 aa4.88□□□□□ -1.63
CBX5-203ENST00000547872 TTPALQ9BTX7 342 aa4.88□□□□□ -1.63
CBX5-203ENST00000547872 CNPPD1Q9BV87 410 aa4.88□□□□□ -1.63
CBX5-203ENST00000547872 USP44Q9H0E7 712 aa4.88□□□□□ -1.63
CBX5-203ENST00000547872 UPF3AQ9H1J1 476 aaKnown RBP4.88□□□□□ -1.63
CBX5-203ENST00000547872 SMOC2Q9H3U7 446 aa4.88□□□□□ -1.63
CBX5-203ENST00000547872 ABHD16BQ9H3Z7 469 aa4.88□□□□□ -1.63
CBX5-203ENST00000547872 VCPKMTQ9H867 229 aa4.88□□□□□ -1.63
CBX5-203ENST00000547872 UNKLQ9H9P5 680 aaKnown RBP4.88□□□□□ -1.63
CBX5-203ENST00000547872 RSAD1Q9HA92 442 aa4.88□□□□□ -1.63
CBX5-203ENST00000547872 GPR35Q9HC97 309 aa4.88□□□□□ -1.63
CBX5-203ENST00000547872 C1orf112Q9NSG2 853 aa4.88□□□□□ -1.63
CBX5-203ENST00000547872 GABBR1Q9UBS5 961 aa4.88□□□□□ -1.63
CBX5-203ENST00000547872 PCDHA6Q9UN73 950 aa4.88□□□□□ -1.63
CBX5-203ENST00000547872 A0A088AWK7 358 aa4.87□□□□□ -1.63
CBX5-203ENST00000547872 PRAMEF33A0A0G2JMD5 474 aa4.87□□□□□ -1.63
CBX5-203ENST00000547872 A0A1W2PS29 197 aa4.87□□□□□ -1.63
CBX5-203ENST00000547872 PIPSLA2A3N6 862 aa4.87□□□□□ -1.63
CBX5-203ENST00000547872 E9PLN8 166 aa4.87□□□□□ -1.63
CBX5-203ENST00000547872 MARCH6O60337 910 aa4.87□□□□□ -1.63
CBX5-203ENST00000547872 PRAMEF10O60809 474 aa4.87□□□□□ -1.63
CBX5-203ENST00000547872 RAMP2O60895 175 aa4.87□□□□□ -1.63
CBX5-203ENST00000547872 CABYRO75952 493 aa4.87□□□□□ -1.63
CBX5-203ENST00000547872 BAIAP3O94812 1187 aa4.87□□□□□ -1.63
CBX5-203ENST00000547872 SLPIP03973 132 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms