RNA–Protein interactions for RNA: ENST00000547374.5

BRF1-210, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 5

Gene BRF1, Length 3,809 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-210ENST00000547374 SIN3BO75182 1162 aa13.36□□□□□ -0.27
BRF1-210ENST00000547374 TM7SF2O76062 418 aa13.36□□□□□ -0.27
BRF1-210ENST00000547374 OR6B1O95007 311 aa13.36□□□□□ -0.27
BRF1-210ENST00000547374 SNUPNO95149 360 aaKnown RBP13.36□□□□□ -0.27
BRF1-210ENST00000547374 SRGAP2BP0DMP2 458 aa13.36□□□□□ -0.27
BRF1-210ENST00000547374 TTC30AQ86WT1 665 aa13.36□□□□□ -0.27
BRF1-210ENST00000547374 ST13P4Q8IZP2 240 aaPredicted RBP13.36□□□□□ -0.27
BRF1-210ENST00000547374 ZNF398Q8TD17 642 aa13.36□□□□□ -0.27
BRF1-210ENST00000547374 TFB1MQ8WVM0 346 aaKnown RBP13.36□□□□□ -0.27
BRF1-210ENST00000547374 CATSPER2Q96P56 530 aa13.36□□□□□ -0.27
BRF1-210ENST00000547374 PDE1CQ14123 709 aaPredicted RBP13.35□□□□□ -0.27
BRF1-210ENST00000547374 GEN1Q17RS7 908 aa13.35□□□□□ -0.27
BRF1-210ENST00000547374 TRMT5Q32P41 509 aaKnown RBP13.35□□□□□ -0.27
BRF1-210ENST00000547374 PPM1LQ5SGD2 360 aa13.35□□□□□ -0.27
BRF1-210ENST00000547374 TMEM198Q66K66 360 aa13.35□□□□□ -0.27
BRF1-210ENST00000547374 RWDD4Q6NW29 188 aaKnown RBP13.35□□□□□ -0.27
BRF1-210ENST00000547374 RAB3IL1Q8TBN0 382 aa13.35□□□□□ -0.27
BRF1-210ENST00000547374 HTR3CQ8WXA8 447 aa13.35□□□□□ -0.27
BRF1-210ENST00000547374 DNAJC1Q96KC8 554 aaKnown RBP13.35□□□□□ -0.27
BRF1-210ENST00000547374 SNX25Q9H3E2 840 aa13.35□□□□□ -0.27
BRF1-210ENST00000547374 ZNF212Q9UDV6 495 aa13.35□□□□□ -0.27
BRF1-210ENST00000547374 SIPA1L1O43166 1804 aa13.35□□□□□ -0.27
BRF1-210ENST00000547374 M0QYT0 321 aa13.35□□□□□ -0.27
BRF1-210ENST00000547374 SMAPO00193 183 aa13.35□□□□□ -0.27
BRF1-210ENST00000547374 PLSCR1O15162 318 aa13.35□□□□□ -0.27
BRF1-210ENST00000547374 RNASEH1O60930 286 aaKnown RBP13.35□□□□□ -0.27
BRF1-210ENST00000547374 CPA3P15088 417 aa13.35□□□□□ -0.27
BRF1-210ENST00000547374 CD1EP15812 388 aa13.35□□□□□ -0.27
BRF1-210ENST00000547374 FGFR3P22607 806 aa13.35□□□□□ -0.27
BRF1-210ENST00000547374 LMO2P25791 158 aa13.35□□□□□ -0.27
BRF1-210ENST00000547374 SLC18A2Q05940 514 aa13.35□□□□□ -0.27
BRF1-210ENST00000547374 ZNF618Q5T7W0 954 aa13.35□□□□□ -0.27
BRF1-210ENST00000547374 SLC2A14Q8TDB8 520 aa13.35□□□□□ -0.27
BRF1-210ENST00000547374 FAM167AQ96KS9 214 aa13.35□□□□□ -0.27
BRF1-210ENST00000547374 TBCBQ99426 244 aa13.35□□□□□ -0.27
BRF1-210ENST00000547374 CYP4F12Q9HCS2 524 aa13.35□□□□□ -0.27
BRF1-210ENST00000547374 ANLNQ9NQW6 1124 aa13.35□□□□□ -0.27
BRF1-210ENST00000547374 C20orf96Q9NUD7 363 aaPredicted RBP13.35□□□□□ -0.27
BRF1-210ENST00000547374 TUBGCP4Q9UGJ1 667 aa13.35□□□□□ -0.27
BRF1-210ENST00000547374 SNX10Q9Y5X0 201 aa13.35□□□□□ -0.27
BRF1-210ENST00000547374 SDR42E2A6NKP2 422 aa13.35□□□□□ -0.27
BRF1-210ENST00000547374 E7ESA3 106 aa13.35□□□□□ -0.27
BRF1-210ENST00000547374 STX16-NPEPL1H3BU86 382 aa13.35□□□□□ -0.27
BRF1-210ENST00000547374 SPAG6O75602 509 aa13.35□□□□□ -0.27
BRF1-210ENST00000547374 HDAC4P56524 1084 aa13.35□□□□□ -0.27
BRF1-210ENST00000547374 IRF9Q00978 393 aa13.35□□□□□ -0.27
BRF1-210ENST00000547374 DLG1Q12959 904 aa13.35□□□□□ -0.27
BRF1-210ENST00000547374 SEPT6Q14141 434 aa13.35□□□□□ -0.27
BRF1-210ENST00000547374 HSF5Q4G112 596 aaPredicted RBP13.35□□□□□ -0.27
BRF1-210ENST00000547374 SFT2D3Q587I9 215 aa13.35□□□□□ -0.27
BRF1-210ENST00000547374 AFG1LQ8WV93 481 aa13.35□□□□□ -0.27
BRF1-210ENST00000547374 SEMA6AQ9H2E6 1030 aa13.35□□□□□ -0.27
BRF1-210ENST00000547374 LRRC4Q9HBW1 653 aa13.35□□□□□ -0.27
BRF1-210ENST00000547374 GTSE1Q9NYZ3 720 aa13.35□□□□□ -0.27
BRF1-210ENST00000547374 IRF6O14896 467 aa13.34□□□□□ -0.27
BRF1-210ENST00000547374 ITGA2BP08514 1039 aa13.34□□□□□ -0.27
BRF1-210ENST00000547374 CCNFP41002 786 aa13.34□□□□□ -0.27
BRF1-210ENST00000547374 NME5P56597 212 aa13.34□□□□□ -0.27
BRF1-210ENST00000547374 ART3Q13508 389 aa13.34□□□□□ -0.27
BRF1-210ENST00000547374 STILQ15468 1287 aa13.34□□□□□ -0.27
BRF1-210ENST00000547374 CHSY1Q86X52 802 aa13.34□□□□□ -0.27
BRF1-210ENST00000547374 SNX32Q86XE0 403 aa13.34□□□□□ -0.27
BRF1-210ENST00000547374 DEFB106AQ8N104 65 aa13.34□□□□□ -0.27
BRF1-210ENST00000547374 ZNF781Q8N8C0 355 aa13.34□□□□□ -0.27
BRF1-210ENST00000547374 NIPA2Q8N8Q9 360 aa13.34□□□□□ -0.27
BRF1-210ENST00000547374 ICA1LQ8NDH6 482 aa13.34□□□□□ -0.27
BRF1-210ENST00000547374 PPWD1Q96BP3 646 aaKnown RBP13.34□□□□□ -0.27
BRF1-210ENST00000547374 MFSD3Q96ES6 412 aa13.34□□□□□ -0.27
BRF1-210ENST00000547374 LRGUKQ96M69 825 aa13.34□□□□□ -0.27
BRF1-210ENST00000547374 PHF12Q96QT6 1004 aa13.34□□□□□ -0.27
BRF1-210ENST00000547374 CDRT15Q96T59 188 aa13.34□□□□□ -0.27
BRF1-210ENST00000547374 NIFKQ9BYG3 293 aaKnown RBP13.34□□□□□ -0.27
BRF1-210ENST00000547374 PRDM12Q9H4Q4 367 aa13.34□□□□□ -0.27
BRF1-210ENST00000547374 COPS7BQ9H9Q2 264 aaPredicted RBP13.34□□□□□ -0.27
BRF1-210ENST00000547374 IARS2Q9NSE4 1012 aaKnown RBP13.34□□□□□ -0.27
BRF1-210ENST00000547374 TLK1Q9UKI8 766 aa13.34□□□□□ -0.27
BRF1-210ENST00000547374 CNTN6Q9UQ52 1028 aa13.34□□□□□ -0.27
BRF1-210ENST00000547374 PLK1P53350 603 aa13.34□□□□□ -0.27
BRF1-210ENST00000547374 SLC6A3Q01959 620 aa13.34□□□□□ -0.27
BRF1-210ENST00000547374 DEUP1Q05D60 604 aa13.34□□□□□ -0.27
BRF1-210ENST00000547374 VGLL4Q14135 290 aa13.34□□□□□ -0.27
BRF1-210ENST00000547374 CNGA3Q16281 694 aa13.34□□□□□ -0.27
BRF1-210ENST00000547374 SOWAHAQ2M3V2 549 aa13.34□□□□□ -0.27
BRF1-210ENST00000547374 PAN2Q504Q3 1202 aaKnown RBP13.34□□□□□ -0.27
BRF1-210ENST00000547374 PACS1Q6VY07 963 aa13.34□□□□□ -0.27
BRF1-210ENST00000547374 FRMD7Q6ZUT3 714 aa13.34□□□□□ -0.27
BRF1-210ENST00000547374 PLD6Q8N2A8 252 aaKnown RBP13.34□□□□□ -0.27
BRF1-210ENST00000547374 SLC7A14Q8TBB6 771 aa13.34□□□□□ -0.27
BRF1-210ENST00000547374 EDEM1Q92611 657 aa13.34□□□□□ -0.27
BRF1-210ENST00000547374 GPR20Q99678 358 aa13.34□□□□□ -0.27
BRF1-210ENST00000547374 LHX5Q9H2C1 402 aa13.34□□□□□ -0.27
BRF1-210ENST00000547374 C19orf81C9J6K1 198 aa13.34□□□□□ -0.27
BRF1-210ENST00000547374 MFSD11O43934 449 aa13.34□□□□□ -0.27
BRF1-210ENST00000547374 CHRNGP07510 517 aa13.34□□□□□ -0.27
BRF1-210ENST00000547374 TSPAN8P19075 237 aa13.34□□□□□ -0.27
BRF1-210ENST00000547374 IL4RP24394 825 aa13.34□□□□□ -0.27
BRF1-210ENST00000547374 NDUFV1P49821 464 aa13.34□□□□□ -0.27
BRF1-210ENST00000547374 COG7P83436 770 aa13.34□□□□□ -0.27
BRF1-210ENST00000547374 OCRLQ01968 901 aa13.34□□□□□ -0.27
BRF1-210ENST00000547374 ADIGQ0VDE8 80 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms